BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012392
         (860 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277625.2| PREDICTED: probable ATP-dependent RNA helica...   352   8e-95
emb|CBI15516.3| unnamed protein product [Vitis vinifera]              352   8e-95
emb|CAN67889.1| hypothetical protein VITISV_013607 [Vitis vinifera]   347   2e-93
ref|XP_004135386.1| PREDICTED: probable ATP-dependent RNA helica...   343   3e-92
emb|CAN66462.1| hypothetical protein VITISV_035844 [Vitis vinifera]   342   6e-92

>ref|XP_002277625.2| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Vitis
            vinifera]
          Length = 1178

 Score =  352 bits (902), Expect = 8e-95
 Identities = 184/285 (64%), Positives = 221/285 (77%), Gaps = 1/285 (0%)
 Frame = -3

Query: 855  NLWSNDGSLIRAVICAGLFPGICSVVNKETSVSLKTMEDGRVLLYSNSVNGRESNIPYPW 676
            N WS+D  LIRAVICAGLFPGICSVVNKE S+SLKTMEDG+VLLYSNSVN RE  IPYPW
Sbjct: 890  NKWSHDEHLIRAVICAGLFPGICSVVNKEKSISLKTMEDGQVLLYSNSVNAREPKIPYPW 949

Query: 675  LVFNEKVKVNSVFLRDSTAISDSMLLLFGGKLSRGDNDRHLKMLGGYLEFFMKPTLAETY 496
            LVFNEKVKVNSVFLRDSTA+SDSMLLLFGG++SRG  D HLKMLGGYLEFFMKP LA+TY
Sbjct: 950  LVFNEKVKVNSVFLRDSTAVSDSMLLLFGGRISRGGIDGHLKMLGGYLEFFMKPDLADTY 1009

Query: 495  TNLKRGLEKIIQIKLLNPKMNIEIH*ELLSAVRLLITEDQCNGRFVFGHQILKPSKXXXX 316
             +LK+ LE++IQ KLLNP +++  + ELLSAVRLL++ED+CNGRFVFG Q+ K SK    
Sbjct: 1010 LSLKKELEELIQQKLLNPTLDVHTNNELLSAVRLLVSEDECNGRFVFGRQLPKSSKQAIK 1069

Query: 315  XXXXXXXVISRNXXXXXXXGDNAKNQLQTLVTRAGHENPVYKAYLVKNNQFQAMVI-NGM 139
                   + S         GDNAK +LQT++ R GH+ PVYK   +KNN F++ VI NG+
Sbjct: 1070 ETSAGALLRS-----GGAGGDNAKGRLQTVLIRGGHQAPVYKTRQLKNNMFRSTVIFNGL 1124

Query: 138  QFTGQPCNNRKLAEKDAAPQPLLSLTGRLQACPVDIERVSLLLKQ 4
            QF GQPC+++KLAEKDAA + L  L G  Q+   DI+ +S+LLK+
Sbjct: 1125 QFAGQPCSSKKLAEKDAAAKALEWLMGERQSSTEDIDHMSMLLKK 1169


>emb|CBI15516.3| unnamed protein product [Vitis vinifera]
          Length = 1057

 Score =  352 bits (902), Expect = 8e-95
 Identities = 184/285 (64%), Positives = 221/285 (77%), Gaps = 1/285 (0%)
 Frame = -3

Query: 855  NLWSNDGSLIRAVICAGLFPGICSVVNKETSVSLKTMEDGRVLLYSNSVNGRESNIPYPW 676
            N WS+D  LIRAVICAGLFPGICSVVNKE S+SLKTMEDG+VLLYSNSVN RE  IPYPW
Sbjct: 769  NKWSHDEHLIRAVICAGLFPGICSVVNKEKSISLKTMEDGQVLLYSNSVNAREPKIPYPW 828

Query: 675  LVFNEKVKVNSVFLRDSTAISDSMLLLFGGKLSRGDNDRHLKMLGGYLEFFMKPTLAETY 496
            LVFNEKVKVNSVFLRDSTA+SDSMLLLFGG++SRG  D HLKMLGGYLEFFMKP LA+TY
Sbjct: 829  LVFNEKVKVNSVFLRDSTAVSDSMLLLFGGRISRGGIDGHLKMLGGYLEFFMKPDLADTY 888

Query: 495  TNLKRGLEKIIQIKLLNPKMNIEIH*ELLSAVRLLITEDQCNGRFVFGHQILKPSKXXXX 316
             +LK+ LE++IQ KLLNP +++  + ELLSAVRLL++ED+CNGRFVFG Q+ K SK    
Sbjct: 889  LSLKKELEELIQQKLLNPTLDVHTNNELLSAVRLLVSEDECNGRFVFGRQLPKSSKQAIK 948

Query: 315  XXXXXXXVISRNXXXXXXXGDNAKNQLQTLVTRAGHENPVYKAYLVKNNQFQAMVI-NGM 139
                   + S         GDNAK +LQT++ R GH+ PVYK   +KNN F++ VI NG+
Sbjct: 949  ETSAGALLRS-----GGAGGDNAKGRLQTVLIRGGHQAPVYKTRQLKNNMFRSTVIFNGL 1003

Query: 138  QFTGQPCNNRKLAEKDAAPQPLLSLTGRLQACPVDIERVSLLLKQ 4
            QF GQPC+++KLAEKDAA + L  L G  Q+   DI+ +S+LLK+
Sbjct: 1004 QFAGQPCSSKKLAEKDAAAKALEWLMGERQSSTEDIDHMSMLLKK 1048


>emb|CAN67889.1| hypothetical protein VITISV_013607 [Vitis vinifera]
          Length = 558

 Score =  347 bits (891), Expect = 2e-93
 Identities = 183/285 (64%), Positives = 219/285 (76%), Gaps = 1/285 (0%)
 Frame = -3

Query: 855  NLWSNDGSLIRAVICAGLFPGICSVVNKETSVSLKTMEDGRVLLYSNSVNGRESNIPYPW 676
            N WS+D  LIRAVICAGLFPGICSVVNKE S+SLKTMEDG+VLLYSNSVN RE  IPYPW
Sbjct: 270  NKWSHDEHLIRAVICAGLFPGICSVVNKEKSISLKTMEDGQVLLYSNSVNAREPKIPYPW 329

Query: 675  LVFNEKVKVNSVFLRDSTAISDSMLLLFGGKLSRGDNDRHLKMLGGYLEFFMKPTLAETY 496
            LVFNEKVKVNSVFLRDSTA+SDSMLLLFGG++SRG  D HLKMLGGYLEFFMKP LA+TY
Sbjct: 330  LVFNEKVKVNSVFLRDSTAVSDSMLLLFGGRISRGGIDGHLKMLGGYLEFFMKPDLADTY 389

Query: 495  TNLKRGLEKIIQIKLLNPKMNIEIH*ELLSAVRLLITEDQCNGRFVFGHQILKPSKXXXX 316
             +LK+ LE++IQ KLLNP +++  + ELLSAVRLL++ED+CNGRFVFG Q+ K SK    
Sbjct: 390  LSLKKELEELIQQKLLNPTLDVHTNNELLSAVRLLVSEDECNGRFVFGXQLPKSSKQAIK 449

Query: 315  XXXXXXXVISRNXXXXXXXGDNAKNQLQTLVTRAGHENPVYKAYLVKNNQFQAMVI-NGM 139
                   + S         GDNAK +LQT++ R GH+ PVYK   +KNN F++ VI N +
Sbjct: 450  ETSPGALLRS-----GGAGGDNAKGRLQTVLIRGGHQAPVYKTRQLKNNMFRSTVIFNEL 504

Query: 138  QFTGQPCNNRKLAEKDAAPQPLLSLTGRLQACPVDIERVSLLLKQ 4
            QF GQPC+ +KLAEKDAA + L  L G  Q+   DI+ +S+LLK+
Sbjct: 505  QFVGQPCSXKKLAEKDAAAKALEWLMGERQSSTEDIDHMSMLLKK 549


>ref|XP_004135386.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Cucumis
            sativus]
          Length = 1181

 Score =  343 bits (880), Expect = 3e-92
 Identities = 180/287 (62%), Positives = 217/287 (75%), Gaps = 2/287 (0%)
 Frame = -3

Query: 858  YNLWSNDGSLIRAVICAGLFPGICSVVNKETSVSLKTMEDGRVLLYSNSVNGRESNIPYP 679
            YN WS D  LIRAVIC GL+PG+CSVV  E S SLKTMEDG+VLLYSNSVN RES IPYP
Sbjct: 880  YNAWSLDEQLIRAVICNGLYPGVCSVVQNEKSFSLKTMEDGQVLLYSNSVNARESRIPYP 939

Query: 678  WLVFNEKVKVNSVFLRDSTAISDSMLLLFGGKLSRGDNDRHLKMLGGYLEFFMKPTLAET 499
            W+VFNEK+KVNS+FLRDSTAISDSMLLLFGG +S+GD++ HLKMLGG+LEFFMKP LAET
Sbjct: 940  WIVFNEKIKVNSIFLRDSTAISDSMLLLFGGSISKGDHEGHLKMLGGFLEFFMKPDLAET 999

Query: 498  YTNLKRGLEKIIQIKLLNPKMNIEIH*ELLSAVRLLITEDQCNGRFVFGHQIL-KPSKXX 322
            Y  L+  LE++I+IKLLNPKM++  H ELLSAVRLLI+EDQC GRFVFG QIL +PSK  
Sbjct: 1000 YQKLRVELEELIRIKLLNPKMDLHSHHELLSAVRLLISEDQCEGRFVFGRQILQQPSKTS 1059

Query: 321  XXXXXXXXXVISRNXXXXXXXGDNAKNQLQTLVTRAGHENPVYKAYLVKNNQFQAMV-IN 145
                       + +       GDN+K+QLQTL+TRAG+  P+YK   +KNNQF+A V  N
Sbjct: 1060 APAAAAAPPPTAVSRIESGPGGDNSKSQLQTLLTRAGYAAPIYKTKQLKNNQFRATVEFN 1119

Query: 144  GMQFTGQPCNNRKLAEKDAAPQPLLSLTGRLQACPVDIERVSLLLKQ 4
            G+Q  GQPC N+K AEKDAA + L  L G  Q     + ++S++LK+
Sbjct: 1120 GLQIMGQPCTNKKNAEKDAAAEALEWLMGGNQMGHDYVNQMSMMLKR 1166


>emb|CAN66462.1| hypothetical protein VITISV_035844 [Vitis vinifera]
          Length = 1180

 Score =  342 bits (877), Expect = 6e-92
 Identities = 182/290 (62%), Positives = 219/290 (75%), Gaps = 5/290 (1%)
 Frame = -3

Query: 858  YNLWSNDGSLIRAVICAGLFPGICSVVNKETSVSLKTMEDGRVLLYSNSVNGRESNIPYP 679
            YN WS D  LIRAVIC GL+PGICSVV  E S SLKTMEDG+VLL+SNSVN RE  IPYP
Sbjct: 889  YNAWSYDEHLIRAVICCGLYPGICSVVQNEKSFSLKTMEDGQVLLHSNSVNARECKIPYP 948

Query: 678  WLVFNEKVKVNSVFLRDSTAISDSMLLLFGGKLSRGDNDRHLKMLGGYLEFFMKPTLAET 499
            WLVFNEK+KVNSVFLRDSTA+SDS+LLLFGG + RGD D HLKMLGGYLEFFMKP +AE 
Sbjct: 949  WLVFNEKIKVNSVFLRDSTAVSDSVLLLFGGDILRGDGDGHLKMLGGYLEFFMKPAIAEM 1008

Query: 498  YTNLKRGLEKIIQIKLLNPKMNIEIH*ELLSAVRLLITEDQCNGRFVFGH----QILKPS 331
            Y +L+R L+++IQ KLLNP+M I ++ ELLSAVRLLI+EDQC+GRFVF H    Q++KPS
Sbjct: 1009 YQSLRRELDELIQNKLLNPRMGIHMYHELLSAVRLLISEDQCDGRFVFSHQVGRQVVKPS 1068

Query: 330  KXXXXXXXXXXXVISRNXXXXXXXGDNAKNQLQTLVTRAGHENPVYKAYLVKNNQFQAMV 151
            K           ++SR        GDN+K+QLQTL+TRAG+  P YK   +KNNQF++ V
Sbjct: 1069 K--TSVTVMPKALVSRT--ESGPGGDNSKSQLQTLLTRAGYAAPTYKTKQLKNNQFRSTV 1124

Query: 150  -INGMQFTGQPCNNRKLAEKDAAPQPLLSLTGRLQACPVDIERVSLLLKQ 4
              NGMQ  GQPCNN+K AEKDAA + L  L GR ++    I+ +S+LLK+
Sbjct: 1125 EFNGMQIMGQPCNNKKFAEKDAAAEALQLLMGRTRSGHEYIDHMSMLLKK 1174