BLASTX nr result

ID: Coptis24_contig00012388 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012388
         (643 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513940.1| conserved hypothetical protein [Ricinus comm...   274   9e-72
ref|XP_002285764.1| PREDICTED: uncharacterized protein LOC100253...   266   2e-69
emb|CBI19183.3| unnamed protein product [Vitis vinifera]              233   2e-59
ref|XP_004171128.1| PREDICTED: uncharacterized protein LOC101224...   218   8e-55
ref|XP_004152632.1| PREDICTED: uncharacterized protein LOC101221...   192   4e-47

>ref|XP_002513940.1| conserved hypothetical protein [Ricinus communis]
           gi|223547026|gb|EEF48523.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 313

 Score =  274 bits (701), Expect = 9e-72
 Identities = 130/193 (67%), Positives = 160/193 (82%), Gaps = 2/193 (1%)
 Frame = -3

Query: 575 FSKTTFFVAVLVLSLINLCFGARKLTSLYQPPPMLLSYHNGVLLEGKLPVSILWYGQFTP 396
           F+ + FF+  ++++L N C  +RKLTSLY+PPPM LSYHNG LLEG + VSILWYGQFTP
Sbjct: 10  FTMSLFFIVFILITLTNSCHCSRKLTSLYEPPPMSLSYHNGPLLEGDVHVSILWYGQFTP 69

Query: 395 SQKSIVADFLLSLNPTKQMVSSSSKPNVALWWKTIQTYLRKAGKKQAQVVLSNQVSIENY 216
            Q+SIV+DFLLSLNPT    SSS +P+V+ WW  +QTY+++AGKK+  +VLSNQ S +NY
Sbjct: 70  PQQSIVSDFLLSLNPTHSS-SSSPQPSVSKWWNLVQTYMKRAGKKETDIVLSNQTSDKNY 128

Query: 215 PMGKILKKAQITELTQKV--NSKPGRLVLVLTDKDVAVEGFCMSNCGFHGSNAEKNSAFI 42
            +GKILKK+ ITEL  KV  NS+PG L +VLTDK+VAVEGFCMSNCGFHGSN+++NSAFI
Sbjct: 129 SLGKILKKSHITELANKVINNSRPGGLTIVLTDKEVAVEGFCMSNCGFHGSNSKQNSAFI 188

Query: 41  WVGNSVTQCPGQC 3
           WVGNSVTQCPGQC
Sbjct: 189 WVGNSVTQCPGQC 201


>ref|XP_002285764.1| PREDICTED: uncharacterized protein LOC100253906 [Vitis vinifera]
           gi|147765767|emb|CAN68979.1| hypothetical protein
           VITISV_040775 [Vitis vinifera]
          Length = 316

 Score =  266 bits (681), Expect = 2e-69
 Identities = 137/200 (68%), Positives = 157/200 (78%), Gaps = 4/200 (2%)
 Frame = -3

Query: 590 MGFIQFSKTTFFVAVLV---LSLINLCFGARKLTSLYQPPPMLLSYHNGVLLEGKLPVSI 420
           M F    KT   V V+V   L  I+ CF ARKLTSLYQPPPM L+YHNG LLEG LPVSI
Sbjct: 1   MAFSLSLKTHSLVVVVVIFHLFFISPCFCARKLTSLYQPPPMALTYHNGALLEGHLPVSI 60

Query: 419 LWYGQFTPSQKSIVADFLLSLNPTKQMVS-SSSKPNVALWWKTIQTYLRKAGKKQAQVVL 243
           LWYGQF+P+QKSIVADFLLSL+P  Q  + SS KP+ + WWKTIQTYL+KAGK++ Q+ L
Sbjct: 61  LWYGQFSPAQKSIVADFLLSLDPHDQPENLSSKKPSTSQWWKTIQTYLKKAGKREIQIEL 120

Query: 242 SNQVSIENYPMGKILKKAQITELTQKVNSKPGRLVLVLTDKDVAVEGFCMSNCGFHGSNA 63
           SNQ+S E+  MGK LKK+QI+EL + V+SK   L LVLT KDVAVEGFCMSNCGFHGS+A
Sbjct: 121 SNQISDESCSMGKTLKKSQISELARAVSSKSSGLTLVLTAKDVAVEGFCMSNCGFHGSDA 180

Query: 62  EKNSAFIWVGNSVTQCPGQC 3
            K SAFIWVGNS TQCPGQC
Sbjct: 181 RKRSAFIWVGNSETQCPGQC 200


>emb|CBI19183.3| unnamed protein product [Vitis vinifera]
          Length = 215

 Score =  233 bits (594), Expect = 2e-59
 Identities = 125/200 (62%), Positives = 141/200 (70%), Gaps = 4/200 (2%)
 Frame = -3

Query: 590 MGFIQFSKTTFFVAVLV---LSLINLCFGARKLTSLYQPPPMLLSYHNGVLLEGKLPVSI 420
           M F    KT   V V+V   L  I+ CF ARKLTSLYQPPPM L+YHNG LLEG LPVSI
Sbjct: 1   MAFSLSLKTHSLVVVVVIFHLFFISPCFCARKLTSLYQPPPMALTYHNGALLEGHLPVSI 60

Query: 419 LWYGQFTPSQKSIVADFLLSLNPTKQMVS-SSSKPNVALWWKTIQTYLRKAGKKQAQVVL 243
           LWYGQF+P+QKSIVADFLLSL+P  Q  + SS KP+ + WWKTIQTYL+KAGK++ Q+ L
Sbjct: 61  LWYGQFSPAQKSIVADFLLSLDPHDQPENLSSKKPSTSQWWKTIQTYLKKAGKREIQIEL 120

Query: 242 SNQVSIENYPMGKILKKAQITELTQKVNSKPGRLVLVLTDKDVAVEGFCMSNCGFHGSNA 63
           SNQ+S +                     SK   L LVLT KDVAVEGFCMSNCGFHGS+A
Sbjct: 121 SNQISDD---------------------SKSSGLTLVLTAKDVAVEGFCMSNCGFHGSDA 159

Query: 62  EKNSAFIWVGNSVTQCPGQC 3
            K SAFIWVGNS TQCPGQC
Sbjct: 160 RKRSAFIWVGNSETQCPGQC 179


>ref|XP_004171128.1| PREDICTED: uncharacterized protein LOC101224428 [Cucumis sativus]
          Length = 313

 Score =  218 bits (555), Expect = 8e-55
 Identities = 109/198 (55%), Positives = 142/198 (71%), Gaps = 2/198 (1%)
 Frame = -3

Query: 590 MGFIQFSKTTFFVAVL-VLSLINLCFGARKLTSLYQPPPMLLSYHNGVLLEGKLPVSILW 414
           MGF QF  +   V V  +++L NL FGARKL SLY+ PPM + YHNG LL+G +PVSILW
Sbjct: 1   MGFFQFPNSILVVIVFCMMNLFNLGFGARKLASLYEAPPMGIRYHNGALLQGNVPVSILW 60

Query: 413 YGQFTPSQKSIVADFLLSLNPTKQMVSSSSKPNVALWWKTIQTYL-RKAGKKQAQVVLSN 237
           YG+FT  QK+IV DF LSL+      S+S  P+V+ WW T+Q  L  K+ KK A+++L+ 
Sbjct: 61  YGKFTAPQKAIVIDFFLSLDSHSDK-SNSVTPSVSRWWNTVQVRLYEKSRKKDAKLILAK 119

Query: 236 QVSIENYPMGKILKKAQITELTQKVNSKPGRLVLVLTDKDVAVEGFCMSNCGFHGSNAEK 57
           Q++ + Y +GK LK+ QI+EL+++  SK G + LVLT +DVAVEGFCMS CGFH  + + 
Sbjct: 120 QITDDEYSIGKFLKRNQISELSRRAGSKYGGMTLVLTAEDVAVEGFCMSTCGFHNWDHKS 179

Query: 56  NSAFIWVGNSVTQCPGQC 3
            SAFIWVGNSV QCPGQC
Sbjct: 180 KSAFIWVGNSVNQCPGQC 197


>ref|XP_004152632.1| PREDICTED: uncharacterized protein LOC101221347 [Cucumis sativus]
          Length = 273

 Score =  192 bits (488), Expect = 4e-47
 Identities = 89/158 (56%), Positives = 119/158 (75%)
 Frame = -3

Query: 476 MLLSYHNGVLLEGKLPVSILWYGQFTPSQKSIVADFLLSLNPTKQMVSSSSKPNVALWWK 297
           M + YHNG LL+G +PVSILWYG+FT  QK+IV DF LSL+      S+S  P+V+ WW 
Sbjct: 1   MGIRYHNGALLQGNVPVSILWYGKFTAPQKAIVIDFFLSLDSHSDK-SNSVTPSVSRWWN 59

Query: 296 TIQTYLRKAGKKQAQVVLSNQVSIENYPMGKILKKAQITELTQKVNSKPGRLVLVLTDKD 117
           T+Q Y+++AGKK A+++L+ Q++ + Y +GK LK+ QI+EL+++  SK G + LVLT +D
Sbjct: 60  TVQVYMKRAGKKDAKLILAKQITDDEYSIGKFLKRNQISELSRRAGSKYGGMTLVLTAED 119

Query: 116 VAVEGFCMSNCGFHGSNAEKNSAFIWVGNSVTQCPGQC 3
           VAVEGFCMS CGFH  + +  SAFIWVGNSV QCPGQC
Sbjct: 120 VAVEGFCMSTCGFHNWDHKSKSAFIWVGNSVNQCPGQC 157


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