BLASTX nr result

ID: Coptis24_contig00012387 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012387
         (239 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275843.2| PREDICTED: allantoate deiminase, chloroplast...    74   2e-11
emb|CBI27216.3| unnamed protein product [Vitis vinifera]               74   2e-11
ref|XP_002532138.1| conserved hypothetical protein [Ricinus comm...    74   2e-11
ref|NP_001058304.1| Os06g0665500 [Oryza sativa Japonica Group] g...    72   4e-11
ref|XP_003560415.1| PREDICTED: allantoate deiminase, chloroplast...    72   4e-11

>ref|XP_002275843.2| PREDICTED: allantoate deiminase, chloroplastic-like [Vitis
           vinifera]
          Length = 492

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 43/78 (55%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
 Frame = +2

Query: 8   GVETNDTNIIRSGLFPKILKEEA-VSRLQEIGKVIAFTDEEGVRFQTTFLGSATLAGTLP 184
           G+      II +    K+L   A + +L+   +VIAF+DEEGVRFQ+TFLGSA +AG LP
Sbjct: 142 GIFDGSLGIISAISVLKVLNITAKLQKLRRPIEVIAFSDEEGVRFQSTFLGSAAVAGVLP 201

Query: 185 VSALLISDKSGATVQHAL 238
            SAL ISDKSG TVQ+AL
Sbjct: 202 ASALQISDKSGVTVQNAL 219


>emb|CBI27216.3| unnamed protein product [Vitis vinifera]
          Length = 478

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 43/78 (55%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
 Frame = +2

Query: 8   GVETNDTNIIRSGLFPKILKEEA-VSRLQEIGKVIAFTDEEGVRFQTTFLGSATLAGTLP 184
           G+      II +    K+L   A + +L+   +VIAF+DEEGVRFQ+TFLGSA +AG LP
Sbjct: 128 GIFDGSLGIISAISVLKVLNITAKLQKLRRPIEVIAFSDEEGVRFQSTFLGSAAVAGVLP 187

Query: 185 VSALLISDKSGATVQHAL 238
            SAL ISDKSG TVQ+AL
Sbjct: 188 ASALQISDKSGVTVQNAL 205


>ref|XP_002532138.1| conserved hypothetical protein [Ricinus communis]
           gi|223528174|gb|EEF30237.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 436

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 40/62 (64%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
 Frame = +2

Query: 56  KILKEEAV-SRLQEIGKVIAFTDEEGVRFQTTFLGSATLAGTLPVSALLISDKSGATVQH 232
           K LK + + ++L+   +VIAF+DEEGVRFQ+TFLGSA +AG LPVSAL ISDKSG TVQ 
Sbjct: 102 KALKSKGMLNKLKRPVEVIAFSDEEGVRFQSTFLGSAAVAGILPVSALQISDKSGVTVQD 161

Query: 233 AL 238
           +L
Sbjct: 162 SL 163


>ref|NP_001058304.1| Os06g0665500 [Oryza sativa Japonica Group]
           gi|52076511|dbj|BAD45389.1| putative N-carbamyl-L-amino
           acid amidohydrolase [Oryza sativa Japonica Group]
           gi|113596344|dbj|BAF20218.1| Os06g0665500 [Oryza sativa
           Japonica Group] gi|215706908|dbj|BAG93368.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 491

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 40/62 (64%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
 Frame = +2

Query: 56  KILKEEA-VSRLQEIGKVIAFTDEEGVRFQTTFLGSATLAGTLPVSALLISDKSGATVQH 232
           K+LK    + RL    +VIAF+DEEGVRFQTTFLGSA +AGTLP S L +SDKSG TVQ 
Sbjct: 144 KVLKVTGRLQRLTRPVEVIAFSDEEGVRFQTTFLGSAAVAGTLPESILQVSDKSGTTVQD 203

Query: 233 AL 238
            L
Sbjct: 204 VL 205


>ref|XP_003560415.1| PREDICTED: allantoate deiminase, chloroplastic-like [Brachypodium
           distachyon]
          Length = 509

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 40/62 (64%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
 Frame = +2

Query: 56  KILKEEA-VSRLQEIGKVIAFTDEEGVRFQTTFLGSATLAGTLPVSALLISDKSGATVQH 232
           K+LK    + RL    +VIAF+DEEGVRFQTTFLGSA +AGTLP S L +SDKSG TVQ 
Sbjct: 155 KVLKVTGKLQRLTRPVEVIAFSDEEGVRFQTTFLGSAAVAGTLPESILQVSDKSGTTVQD 214

Query: 233 AL 238
            L
Sbjct: 215 VL 216


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