BLASTX nr result

ID: Coptis24_contig00012373 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012373
         (825 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509542.1| conserved hypothetical protein [Ricinus comm...   131   2e-28
ref|XP_002298612.1| predicted protein [Populus trichocarpa] gi|2...   129   8e-28
ref|XP_002298611.1| predicted protein [Populus trichocarpa] gi|2...   127   3e-27
ref|XP_002329350.1| predicted protein [Populus trichocarpa] gi|2...   125   1e-26
emb|CAN68458.1| hypothetical protein VITISV_031449 [Vitis vinifera]   119   6e-25

>ref|XP_002509542.1| conserved hypothetical protein [Ricinus communis]
           gi|223549441|gb|EEF50929.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 431

 Score =  131 bits (329), Expect = 2e-28
 Identities = 94/270 (34%), Positives = 129/270 (47%), Gaps = 4/270 (1%)
 Frame = +3

Query: 3   DLVLLENQIPFIVLQTLFDLAKDHNGGYF-LNELVTIFFQPILPSM-RPVTTSSFI-KGK 173
           DL+LLENQIP++VL  LF++ K+ NG    L +L   FF  +  S   PV   + + K K
Sbjct: 172 DLILLENQIPWLVLDCLFEMTKEENGNSEPLVQLAIEFFANMFSSAPSPVYDPNLLAKSK 231

Query: 174 XXXXXXXXXXXXXXXXMKGGNYPEWEYIRSATELRESGVRFRKKGDLADGLLDITFTKDG 353
                            +     EW+   SATE++ESG+ F+K  D A  +LDI F K G
Sbjct: 232 HILDLLRNWLIAPIYPTQSNEVSEWQPFPSATEIKESGILFKKHED-AKSILDIRFDK-G 289

Query: 354 VLEIPPFFFGESWNILLPNLIALEQSRCDYTDQITSYFIFFDSLINTEDDVKLLRTQGIM 533
           +LEIP     E+   +  NLI+ EQ   +Y   +T Y I  D+LINT  DV +L +  I+
Sbjct: 290 ILEIPNLLIQETTETIFRNLISFEQCSREYPPIVTCYAILLDNLINTVKDVNILCSSDII 349

Query: 534 EGLINEDEKVADAINNLFKGAVVDKFYYDGLFTRVNAY-CRNWXXXXXXXXXXXVSLQRD 710
           +  +N  E      N L+  A V  FYY  L   VNAY  R W            +   +
Sbjct: 350 DNWLN-PEDATQFFNKLYLDAYVKIFYYLNLCKEVNAYRKRRW-------PRWRAAYMHN 401

Query: 711 YFSTPWSVISXXXXXXXXXXXXXQTIFSIL 800
           YF TPW + S             QT+FSI+
Sbjct: 402 YFGTPWVIASQIVAAIVLILTFLQTLFSII 431


>ref|XP_002298612.1| predicted protein [Populus trichocarpa] gi|222845870|gb|EEE83417.1|
           predicted protein [Populus trichocarpa]
          Length = 437

 Score =  129 bits (324), Expect = 8e-28
 Identities = 85/266 (31%), Positives = 133/266 (50%)
 Frame = +3

Query: 3   DLVLLENQIPFIVLQTLFDLAKDHNGGYFLNELVTIFFQPILPSMRPVTTSSFIKGKXXX 182
           DL+L+ENQIP++VL+ LF++  D      L +L   FF+ I  S  P +   + +G+   
Sbjct: 182 DLILVENQIPWLVLEHLFNMTADPGNATTLAQLALQFFRNIF-SFHPPSIDPYYQGQKHL 240

Query: 183 XXXXXXXXXXXXXMKGGNYPEWEYIRSATELRESGVRFRKKGDLADGLLDITFTKDGVLE 362
                         +  +   WE + S T L ++G++  K G+ +  +LDI F ++G LE
Sbjct: 241 LDLLRNWLVLSSGEEEDSETGWEPMPSVTNLVDAGIKL-KVGE-SRSILDIKF-ENGFLE 297

Query: 363 IPPFFFGESWNILLPNLIALEQSRCDYTDQITSYFIFFDSLINTEDDVKLLRTQGIMEGL 542
           IPP    E+  +++ NLI+ EQ     TD+ITSY +  D+LINT  D+    + GI++  
Sbjct: 298 IPPLLVQETTEVIIRNLISYEQCSPKCTDRITSYAVLLDNLINTTKDMDTFTSSGIIDNW 357

Query: 543 INEDEKVADAINNLFKGAVVDKFYYDGLFTRVNAYCRNWXXXXXXXXXXXVSLQRDYFST 722
           +N DE      N L+  A + K+YY  L  +VN Y R               L  +YF T
Sbjct: 358 LNPDE-ATQFFNKLYLDAYLKKYYYLKLCRKVNMYYRR------RFPRWRALLMSNYFGT 410

Query: 723 PWSVISXXXXXXXXXXXXXQTIFSIL 800
           PW+++S             QTIF+I+
Sbjct: 411 PWAIVSIFAAATLLILTIVQTIFTII 436


>ref|XP_002298611.1| predicted protein [Populus trichocarpa] gi|222845869|gb|EEE83416.1|
           predicted protein [Populus trichocarpa]
          Length = 436

 Score =  127 bits (319), Expect = 3e-27
 Identities = 84/266 (31%), Positives = 130/266 (48%)
 Frame = +3

Query: 3   DLVLLENQIPFIVLQTLFDLAKDHNGGYFLNELVTIFFQPILPSMRPVTTSSFIKGKXXX 182
           DL+L+ENQIP++VL+ LF +  +      L +L   FFQ I  S  P +   + +G+   
Sbjct: 181 DLILVENQIPWLVLEHLFKMTAEPGNTTTLAQLALPFFQNIFSS-NPPSIDPYYQGQKHL 239

Query: 183 XXXXXXXXXXXXXMKGGNYPEWEYIRSATELRESGVRFRKKGDLADGLLDITFTKDGVLE 362
                         +      WE I S T L ++G++   K   +  +LDI F ++GVLE
Sbjct: 240 LDLLRNWLVLSSGKEEDGETGWEPIPSVTNLVDAGIKL--KVGKSRSILDIKF-ENGVLE 296

Query: 363 IPPFFFGESWNILLPNLIALEQSRCDYTDQITSYFIFFDSLINTEDDVKLLRTQGIMEGL 542
           IPP    E+  +++ NLI+ EQ     TD+ITSY +  D+LINT  D+    + GI++  
Sbjct: 297 IPPLLIQETTEVIIRNLISYEQCSPKCTDRITSYAVLLDNLINTTKDMDAFTSSGIIDNW 356

Query: 543 INEDEKVADAINNLFKGAVVDKFYYDGLFTRVNAYCRNWXXXXXXXXXXXVSLQRDYFST 722
           +N DE      N L++ A + K+YY  L   +N Y +               L  +YF T
Sbjct: 357 LNPDE-ATQFFNKLYQDAYLKKYYYLQLCQEMNRYHQR------RFPRWRALLMSNYFGT 409

Query: 723 PWSVISXXXXXXXXXXXXXQTIFSIL 800
           PW+++S             QTIF+I+
Sbjct: 410 PWAIVSIFAAATLLILTIVQTIFTIV 435


>ref|XP_002329350.1| predicted protein [Populus trichocarpa] gi|222870400|gb|EEF07531.1|
           predicted protein [Populus trichocarpa]
          Length = 274

 Score =  125 bits (314), Expect = 1e-26
 Identities = 92/275 (33%), Positives = 134/275 (48%), Gaps = 7/275 (2%)
 Frame = +3

Query: 3   DLVLLENQIPFIVLQTLFDLAKDHNGGYF--LNELVTIFFQPILPSMRPVTTS----SFI 164
           DL LLENQIP IVL  L+     H       L EL   FF+P L +   +          
Sbjct: 8   DLALLENQIPIIVLTELYKNIVRHTATAQPRLEELALRFFRPELNTNEGIGAGIRCGDLC 67

Query: 165 KGKXXXXXXXXXXXXXXXXMKGGNYPEWEYIRSATELRESGVRFRKKGDLADGLLDITFT 344
                              ++GG   +W+ I  ATEL  +G++F+K  D     LD++F 
Sbjct: 68  HLLDLLHRSYLPSSLRVEYLRGGA-GKWKLISCATELCAAGIKFQK--DTTQHQLDLSF- 123

Query: 345 KDGVLEIPPFFFGESWNILLPNLIALEQSRCDYTDQITSYFIFFDSLINTEDDVKLLRTQ 524
           ++GV +IPP    +S + L  NLIA EQS  D    +TSY +F D L++T  DV+LL  +
Sbjct: 124 ENGVFKIPPLQIHDSTDSLFRNLIAFEQSMPDCGQYMTSYALFMDRLVDTSSDVELLAKK 183

Query: 525 GIMEGLINEDEKVADAINNLFKGAVVDKFYYDGLFTRVNAYC-RNWXXXXXXXXXXXVSL 701
            I++  +   E V D  NN+ K  VV +FY+  L  +V+AY  ++W            SL
Sbjct: 184 RIIQNDLGGYEDVTDLFNNICKQVVVREFYFTQLCEQVDAYYNKSW-------HGYKASL 236

Query: 702 QRDYFSTPWSVISXXXXXXXXXXXXXQTIFSILSY 806
           ++DYF  PW++IS             QT++S+ SY
Sbjct: 237 KQDYFKNPWAIISFIAAILLLSLATLQTMYSVFSY 271


>emb|CAN68458.1| hypothetical protein VITISV_031449 [Vitis vinifera]
          Length = 439

 Score =  119 bits (299), Expect = 6e-25
 Identities = 94/273 (34%), Positives = 133/273 (48%), Gaps = 6/273 (2%)
 Frame = +3

Query: 3   DLVLLENQIPFIVLQTLFDLAK--DHNG-GYFLNELVTIFFQPILPSMRPVTTSSFIKGK 173
           DL+LLENQ+PF VL+TLF+L +  D  G    + EL  +FF+ +   ++ V         
Sbjct: 171 DLILLENQLPFFVLETLFNLIENTDQEGPSTSVLELTYVFFKFL--GLQEVLIRDSQPDV 228

Query: 174 XXXXXXXXXXXXXXXXMKGGNYPEWEYIRSATELRESGVRFRKKGDLADGLLDITFTKDG 353
                            K  +  ++E IRS TEL E+GV+FR        L++I F  +G
Sbjct: 229 KHLLDLLRLWFVPPSSTKSTSKSKFELIRSVTELHEAGVKFRM--GTVSCLMEIKFI-NG 285

Query: 354 VLEIPPFFFGESWNILLPNLIALEQSRCDYTDQ-ITSYFIFFDSLINTEDDVKLLRTQGI 530
           VLEIPP    ++ + LL NLIA EQ    +T   IT Y I  + LIN+  DV LL   GI
Sbjct: 286 VLEIPPLTIEDTTDSLLGNLIAFEQCCNRFTPHYITDYVILMEYLINSPKDVALLSRYGI 345

Query: 531 MEGLINEDEKVADAINNLFKGAVV--DKFYYDGLFTRVNAYCRNWXXXXXXXXXXXVSLQ 704
           +  L+ ++E V+     L K  V   DKF +  L   VN Y +              +L+
Sbjct: 346 INNLLGDNEGVSHLFKKLGKEVVFNSDKFQFSNLCRDVNKYHKT------RWHIWRATLR 399

Query: 705 RDYFSTPWSVISXXXXXXXXXXXXXQTIFSILS 803
           RDYF+ PW++IS             QT+ S+LS
Sbjct: 400 RDYFNNPWAIISFIGAVLLLFFTLIQTVCSLLS 432


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