BLASTX nr result

ID: Coptis24_contig00012355 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012355
         (1189 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279597.1| PREDICTED: probable glucan endo-1,3-beta-glu...   311   3e-82
emb|CBI33700.3| unnamed protein product [Vitis vinifera]              288   1e-75
ref|XP_002525263.1| Glucan endo-1,3-beta-glucosidase precursor, ...   278   3e-72
ref|XP_003539283.1| PREDICTED: glucan endo-1,3-beta-glucosidase ...   251   2e-64
ref|XP_004168506.1| PREDICTED: probable glucan endo-1,3-beta-glu...   229   1e-57

>ref|XP_002279597.1| PREDICTED: probable glucan endo-1,3-beta-glucosidase A6-like [Vitis
            vinifera]
          Length = 413

 Score =  311 bits (796), Expect = 3e-82
 Identities = 179/386 (46%), Positives = 225/386 (58%), Gaps = 39/386 (10%)
 Frame = +3

Query: 114  ESTTFIDLYDPTSMPQNS-------IAVSMSAEELGEISSSVVKADWWVRTHVLSHYPVT 272
            ES   + LYD + +   +       IAVS+S ++L E+S SV+ A+ W+RTHVL+HYP T
Sbjct: 26   ESVELLTLYDSSPVVLQAMSHTGVPIAVSVSEDDLNEVSGSVLMAESWIRTHVLAHYPST 85

Query: 273  KITTIVVGNGVLCKKEHDDKWGLVLPSVKNIYRSLMRWGLEKEIKVSAVISQECLEPHCE 452
             ITTIVVGN VLC K+ +DK  LVLPS++N+Y SL RWGLEK+IKVSA  S  CL P   
Sbjct: 86   NITTIVVGNTVLCNKDKEDKLRLVLPSLRNVYYSLTRWGLEKDIKVSAAFSSNCLNPDSV 145

Query: 453  RFRDDAGEKVIKPLLTFLKSTNSSYCLNPSPDFSTIS-----LVFSHKESIRKLGVMSLG 617
              RDD  +KVIKPLL+FL+ TNS+Y ++P  +FS +S     LV SH ES++KLG   L 
Sbjct: 146  LDRDDLADKVIKPLLSFLELTNSTYSVHPPTNFSPLSDESAGLVSSHSESMKKLGTSKLR 205

Query: 618  VMNVISCSPKDEKPIKRKLLSM-------------TLPS-----VHSSLGYLFSPPLTKS 743
            V NVI  S K+ KP  RKL  M              LP      ++SS+G+     + K+
Sbjct: 206  V-NVIVQSAKEGKPQSRKLSFMHSKFVEPYPARPTPLPELSPSPIYSSIGFSAPANVAKN 264

Query: 744  PRSP-----STKTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG---- 896
            P  P      T +                                          G    
Sbjct: 265  PLPPLPPLEGTASPPPMTFPFAPEMPPIVIPASPPYSFSLPPCSPFEAGAPAPETGVKQG 324

Query: 897  LWCVAKTSVPVDILQRAVDYACGAGGADCDEIGPNGTCFYPDSVVAHASYAFNSYWQKYK 1076
            LWCVAK SVP D LQ A+DYACG GGADC+EI P+G C+YPD+V+AHASYAFNSYWQK+K
Sbjct: 325  LWCVAKPSVPADTLQEAMDYACGGGGADCEEIEPHGNCYYPDTVLAHASYAFNSYWQKHK 384

Query: 1077 NNNGTCDFKGIAMIIDADPSFLRCQF 1154
             N GTC F G AM+I+ADPSFL C+F
Sbjct: 385  KNGGTCSFGGTAMLINADPSFLHCRF 410


>emb|CBI33700.3| unnamed protein product [Vitis vinifera]
          Length = 357

 Score =  288 bits (738), Expect = 1e-75
 Identities = 164/368 (44%), Positives = 211/368 (57%), Gaps = 21/368 (5%)
 Frame = +3

Query: 114  ESTTFIDLYDPTSMPQNS-------IAVSMSAEELGEISSSVVKADWWVRTHVLSHYPVT 272
            ES   + LYD + +   +       IAVS+S ++L E+S SV+ A+ W+RTHVL+HYP T
Sbjct: 26   ESVELLTLYDSSPVVLQAMSHTGVPIAVSVSEDDLNEVSGSVLMAESWIRTHVLAHYPST 85

Query: 273  KITTIVVGNGVLCKKEHDDKWGLVLPSVKNIYRSLMRWGLEKEIKVSAVISQECLEPHCE 452
             ITTIVVGN VLC K+ +DK  LVLPS++N+Y SL RWGLEK+IKVSA  S  CL P   
Sbjct: 86   NITTIVVGNTVLCNKDKEDKLRLVLPSLRNVYYSLTRWGLEKDIKVSAAFSSNCLNPDSV 145

Query: 453  RFRDDAGEKVIKPLLTFLKSTNSSYCLNPSPDFSTI--------------SLVFSHKESI 590
              RDD  +KVIKPLL+FL+ TNS+Y ++P  +FS +              S+ FS   ++
Sbjct: 146  LDRDDLADKVIKPLLSFLELTNSTYSVHPPTNFSPLPTPLPELSPSPIYSSIGFSAPANV 205

Query: 591  RKLGVMSLGVMNVISCSPKDEKPIKRKLLSMTLPSVHSSLGYLFSPPLTKSPRSPSTKTA 770
             K  +  L  +   +  P    P   ++  + +P   +S  Y FS P    P SP    A
Sbjct: 206  AKNPLPPLPPLEGTASPPPMTFPFAPEMPPIVIP---ASPPYSFSLP----PCSPFEAGA 258

Query: 771  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLWCVAKTSVPVDILQRAV 950
                                                     GLWCVAK SVP D LQ A+
Sbjct: 259  --------------------------------PAPETGVKQGLWCVAKPSVPADTLQEAM 286

Query: 951  DYACGAGGADCDEIGPNGTCFYPDSVVAHASYAFNSYWQKYKNNNGTCDFKGIAMIIDAD 1130
            DYACG GGADC+EI P+G C+YPD+V+AHASYAFNSYWQK+K N GTC F G AM+I+AD
Sbjct: 287  DYACGGGGADCEEIEPHGNCYYPDTVLAHASYAFNSYWQKHKKNGGTCSFGGTAMLINAD 346

Query: 1131 PSFLRCQF 1154
            PSFL C+F
Sbjct: 347  PSFLHCRF 354


>ref|XP_002525263.1| Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus
            communis] gi|223535421|gb|EEF37091.1| Glucan
            endo-1,3-beta-glucosidase precursor, putative [Ricinus
            communis]
          Length = 431

 Score =  278 bits (710), Expect = 3e-72
 Identities = 162/391 (41%), Positives = 213/391 (54%), Gaps = 48/391 (12%)
 Frame = +3

Query: 111  QESTTFIDLYDPT-------SMPQNSIAVSMSAEELGEISSSVVKADWWVRTHVLSHYPV 269
            QES   ++LYD T       S   + +A+S+S E+L  +SSSV+KA+ W+RTHVL+H+P 
Sbjct: 24   QESIQLLNLYDATPEVIQAMSHSAHPLAISVSLEDLTGVSSSVLKAENWLRTHVLAHFPA 83

Query: 270  TKITTIVVGNGVLCKKEHDDKWGLVLPSVKNIYRSLMRWGLEKEIKVSAVISQECLEPHC 449
            TKITTIVVG+ +LC+ E D   G++LPS++NIY SL RWG+E+E+KVSA  S  C  P+ 
Sbjct: 84   TKITTIVVGSTILCQNEQDHNLGMILPSLRNIYYSLTRWGIEREVKVSAAFSFNCFNPNS 143

Query: 450  ERFRDDAGEKVIKPLLTFLKSTNSSYCLNPSPDFSTIS-----LVFSHKESIRKLGVMSL 614
               +DD  EKVI+PLL FL S NS+Y +N  P+ S++S     L+ S  ES +K G    
Sbjct: 144  ILNKDDLAEKVIRPLLHFLHSVNSTYSINLPPNLSSLSHEAMNLLSSKTESFKKFGSFGP 203

Query: 615  GVMNVISCSPKDEKPIKRKLLSM------------------TLPSVHSSLG--------- 713
              +NV+  S + +  + RKL ++                  + P +HSS+G         
Sbjct: 204  NKINVVVNSQRHKLLMNRKLSTVESKIANPFPARPTPLPETSQPPIHSSIGFSVPANIAK 263

Query: 714  -------YLFSPPLTKSPRS--PSTKTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 866
                   Y  SPP    P +  P                                     
Sbjct: 264  NPHPPLSYAASPPPLSYPHASPPPMVFPFAPQQPPFAGPPAGGPYGYLPPCNPADTTIAP 323

Query: 867  XXXXXXXXXGLWCVAKTSVPVDILQRAVDYACGAGGADCDEIGPNGTCFYPDSVVAHASY 1046
                      LWCVAK SVP + LQ A+DYACG GGADC EI PNG CFYPD+VVAHASY
Sbjct: 324  APALGGIVQELWCVAKPSVPAETLQEALDYACGDGGADCAEIMPNGNCFYPDTVVAHASY 383

Query: 1047 AFNSYWQKYKNNNGTCDFKGIAMIIDADPSF 1139
            AFNSY+QK K N G+C F G AM+I +DPSF
Sbjct: 384  AFNSYFQKNKRNGGSCSFGGTAMLITSDPSF 414


>ref|XP_003539283.1| PREDICTED: glucan endo-1,3-beta-glucosidase 13-like [Glycine max]
          Length = 398

 Score =  251 bits (642), Expect = 2e-64
 Identities = 147/381 (38%), Positives = 207/381 (54%), Gaps = 33/381 (8%)
 Frame = +3

Query: 111  QESTTFIDLYDPT-------SMPQNSIAVSMSAEELGEISSSVVKADWWVRTHVLSHYPV 269
            QES  F++L + T       S  +  +A+S++   L E+S S++ A+ W+R +VL+HYP 
Sbjct: 20   QESIEFLNLCETTEDILQASSHAELPLAISVNGGNLNEVSFSILLAEKWLRHNVLAHYPA 79

Query: 270  TKITTIVVGNGVLCKK--EHDDKWGLVLPSVKNIYRSLMRWGLEKEIKVSAVISQECLEP 443
            + ITTIVV     C++  +H++   +VL S+KN+Y SL RWGLEK+IKVS   + +CL  
Sbjct: 80   SNITTIVVETTAFCQQDHQHNNNLAVVLSSLKNVYHSLKRWGLEKDIKVSVAFNLDCLSL 139

Query: 444  HCERFRDDAGEKVIKPLLTFLKSTNSSYCLNPSPDFS-----TISLVFSHKESIRKLGVM 608
            +     +D   K++KPL+ FL+  NS+Y + P   FS     ++SLV SH ES++K G  
Sbjct: 140  NSVSLNNDL--KLVKPLIEFLQEVNSTYSVIPHYGFSRFSDKSLSLVSSHLESLKKPGFF 197

Query: 609  SLGVMNVISCSPKDEKPIKRKLLSMTL-------------------PSVHSSLGYLFSPP 731
             L  +NV++  PK  K I RKL  +                     P   S++ +   PP
Sbjct: 198  YLNNINVLAIVPKGRKNIARKLSVVDFSPIGPFPVRPAPVPEIAKSPMTPSNVAF---PP 254

Query: 732  LTKSPRSPSTKTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLWCVA 911
            L +   SP    +                                          LWCVA
Sbjct: 255  LAQVVSSPPPILSPTFAPEEPPFPFGVPANSPHGFSLPPCNPLHDGSPQIFPIQKLWCVA 314

Query: 912  KTSVPVDILQRAVDYACGAGGADCDEIGPNGTCFYPDSVVAHASYAFNSYWQKYKNNNGT 1091
            K SVP + LQ+A+DYACG GGADC EI P G C+ PD++VAHASYAFNSYWQK+K + GT
Sbjct: 315  KPSVPEETLQQAMDYACGEGGADCMEISPQGNCYNPDTLVAHASYAFNSYWQKHKRSGGT 374

Query: 1092 CDFKGIAMIIDADPSFLRCQF 1154
            C F G AM+I++DPSFL C+F
Sbjct: 375  CSFGGTAMLINSDPSFLHCRF 395


>ref|XP_004168506.1| PREDICTED: probable glucan endo-1,3-beta-glucosidase A6-like [Cucumis
            sativus]
          Length = 398

 Score =  229 bits (583), Expect = 1e-57
 Identities = 146/378 (38%), Positives = 200/378 (52%), Gaps = 27/378 (7%)
 Frame = +3

Query: 111  QESTTFIDL--------YDPTSMPQNSIAVSMSAEELGEISSSVVKADWWVRTHVLSHYP 266
            QES  F+ L        +   S  +  +AVS++  EL E+SSSV+ A+ W+RT VL+HYP
Sbjct: 32   QESIQFVKLDEIASSGVFPAMSASELPVAVSVTDVELPEVSSSVLMAESWLRTFVLAHYP 91

Query: 267  VTKITTIVVGNGVLCKKEHDDKWGL--VLPSVKNIYRSLMRWGLEKEIKVSAVISQECLE 440
             TKITTIVVGN  LC  ++ D   L  VL S+KN++ SL RWGLE +IKVS +  ++C  
Sbjct: 92   STKITTIVVGNSSLCSNKNLDTNNLHIVLLSMKNLFYSLTRWGLENQIKVSTLFPKDCFH 151

Query: 441  PHCERFRDDAGEKVIKPLLTFLKSTNSSYCL----NPSPDFSTISLVFSHKESIRKLGVM 608
                  ++++ + ++K ++ F++STNS+  L    N      T S + +H     K G +
Sbjct: 152  S-----QEESIQNMVKLVIEFIQSTNSTLSLKLPENVISLHETESFISTHTN---KFGFL 203

Query: 609  SLGVMNVISCSPKDEKPIKRKLLSM-----------TLPSVHSSLGYLFSPPLTKSPR-- 749
             L  +N+++   K   P  RKL S            + P + S L    +PPL    +  
Sbjct: 204  KLKKVNLLTSVSKQRNPTNRKLSSFMELKEYEPFFTSEPPLPSDLA---TPPLPPESQIA 260

Query: 750  SPSTKTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLWCVAKTSVPV 929
            SP   +                                           LWCVAK +VP 
Sbjct: 261  SPPHWSFASAPESPPFVVPASPPMGFTLPPCNPNQNAGAPFPQTGGVQKLWCVAKPNVPA 320

Query: 930  DILQRAVDYACGAGGADCDEIGPNGTCFYPDSVVAHASYAFNSYWQKYKNNNGTCDFKGI 1109
            +ILQ+A+DYACG GGADC EI   G+CF+PDS+VAHASYAFNSYWQK K + GTC F G 
Sbjct: 321  EILQQAMDYACGDGGADCREISAEGSCFHPDSLVAHASYAFNSYWQKNKRSGGTCSFGGT 380

Query: 1110 AMIIDADPSFLRCQFPAS 1163
            AMII +DPSF  C+F  S
Sbjct: 381  AMIISSDPSFNHCRFVLS 398


Top