BLASTX nr result

ID: Coptis24_contig00012350 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012350
         (1161 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285824.1| PREDICTED: protein grpE [Vitis vinifera] gi|...   284   3e-74
ref|XP_002301021.1| predicted protein [Populus trichocarpa] gi|2...   260   5e-67
ref|XP_002513845.1| Protein grpE, putative [Ricinus communis] gi...   248   3e-63
ref|XP_004150939.1| PREDICTED: protein GrpE-like [Cucumis sativus]    244   2e-62
ref|XP_004168166.1| PREDICTED: LOW QUALITY PROTEIN: protein GrpE...   244   3e-62

>ref|XP_002285824.1| PREDICTED: protein grpE [Vitis vinifera] gi|302141888|emb|CBI19091.3|
            unnamed protein product [Vitis vinifera]
          Length = 298

 Score =  284 bits (727), Expect = 3e-74
 Identities = 158/289 (54%), Positives = 199/289 (68%), Gaps = 18/289 (6%)
 Frame = -3

Query: 1111 SLLNNPPIPNTQLSGGLKTSIFPRIRQKPFLCSKSNRPCFKPFVRTQDSEP--------- 959
            +L  +PP P+  + G   ++  P +R+            FKPF+  QDS P         
Sbjct: 18   TLALHPPHPSKPILGFRLSTSSPILRRS-----------FKPFLALQDSTPYTNNEEEGS 66

Query: 958  ---------EVDEKKLKGSDLKNLIDAYKEAILNGDEKTVLDKEAFFSKLEDEKNALAEK 806
                     E D+K L  S LK+LI AYK+A+L+GDEK V + EA    +E EK  LA+K
Sbjct: 67   RYDVKTSKSEADQKPL--SVLKSLIKAYKDAVLDGDEKAVSEIEAMIDTIESEKAELAQK 124

Query: 805  VGALLPDIASQKENFIRTQADFENFRKQFEKDQLRLTFNTQKDVIESLLPVVDNFEKAKQ 626
            V AL  +I S KE +IR QADF+NFRK+ EK++L +  + Q +V+ESLLP++DNFE+AKQ
Sbjct: 125  VSALSAEITSGKEKYIRLQADFDNFRKRSEKERLTVRTDAQGEVVESLLPMIDNFERAKQ 184

Query: 625  HIIPETEKGQKINTSYQSIYKQFVEILRSLRVSAVQTIGKPFDPLLHEAIAREESQQFKE 446
             I PETEK +KI+TSYQ IYKQFVEI+RS  V+AV T+GKPFDP LHEAIAREESQ+FKE
Sbjct: 185  QIKPETEKEKKIDTSYQGIYKQFVEIMRSCHVAAVATVGKPFDPALHEAIAREESQEFKE 244

Query: 445  GVIIQETRRGFLLGDRVLRPAVVKVSTGSGHKKTLIPTEESEGQPATAA 299
            G+IIQE RRGFLLGDR+LRPA+VKVSTG G KKT    ++S GQPATAA
Sbjct: 245  GIIIQEIRRGFLLGDRLLRPAMVKVSTGPGRKKTSAVADKSTGQPATAA 293


>ref|XP_002301021.1| predicted protein [Populus trichocarpa] gi|222842747|gb|EEE80294.1|
            predicted protein [Populus trichocarpa]
          Length = 273

 Score =  260 bits (664), Expect = 5e-67
 Identities = 133/252 (52%), Positives = 184/252 (73%), Gaps = 9/252 (3%)
 Frame = -3

Query: 1027 PFLCSKSNRPCFKPFVRTQDSEP---------EVDEKKLKGSDLKNLIDAYKEAILNGDE 875
            P   +   R   K ++  +DS P         E+ E + +G  LKNL+  Y++AI  GDE
Sbjct: 19   PIPINNIKRRSLKTYLAPEDSAPTTNGKEENNEIQEGQKRGPSLKNLMKIYRQAIFYGDE 78

Query: 874  KTVLDKEAFFSKLEDEKNALAEKVGALLPDIASQKENFIRTQADFENFRKQFEKDQLRLT 695
            KT+LD EA  + +E E +   +KV +L  +I S KE +IR QADF+NFRK+ +K+++ + 
Sbjct: 79   KTILDIEAKAATIEKENHEFLQKVSSLSAEITSGKEKYIRLQADFDNFRKRSDKERVNIR 138

Query: 694  FNTQKDVIESLLPVVDNFEKAKQHIIPETEKGQKINTSYQSIYKQFVEILRSLRVSAVQT 515
             + Q +VIESLLP+VD+FE+AKQ I PETEK +KI++SYQ IYKQ V+I+R+L+V+AV T
Sbjct: 139  SDAQGEVIESLLPMVDSFERAKQQIQPETEKEKKIDSSYQGIYKQLVDIMRNLQVAAVPT 198

Query: 514  IGKPFDPLLHEAIAREESQQFKEGVIIQETRRGFLLGDRVLRPAVVKVSTGSGHKKTLIP 335
            +GKPFDP LHEAIAREESQ++KEG+IIQE RRGFL+G+R++RPA+VKVS+G G+KK+ + 
Sbjct: 199  VGKPFDPSLHEAIAREESQEYKEGIIIQEFRRGFLIGNRLIRPAMVKVSSGPGNKKSSVG 258

Query: 334  TEESEGQPATAA 299
            TE    QPATAA
Sbjct: 259  TETRAEQPATAA 270


>ref|XP_002513845.1| Protein grpE, putative [Ricinus communis] gi|223546931|gb|EEF48428.1|
            Protein grpE, putative [Ricinus communis]
          Length = 315

 Score =  248 bits (632), Expect = 3e-63
 Identities = 141/251 (56%), Positives = 176/251 (70%), Gaps = 16/251 (6%)
 Frame = -3

Query: 1003 RPCFKPFVRTQDSEPEV---------DEKKL-KGSDLKNL------IDAYKEAILNGDEK 872
            R  FK ++ T DS P+          D+K L K +D K+L      I+ YKEAIL GDE+
Sbjct: 64   RRSFKAYLATDDSSPDTNNEEGSDQNDKKALQKQTDAKHLPSLTKLINIYKEAILLGDER 123

Query: 871  TVLDKEAFFSKLEDEKNALAEKVGALLPDIASQKENFIRTQADFENFRKQFEKDQLRLTF 692
            TV D EA    +E+    L +KV  L  +I S KE +IR QADF+NFRK+ EK++  +  
Sbjct: 124  TVTDIEARIKIIENTNYELVQKVSDLSTEITSGKEKYIRLQADFDNFRKRSEKERHTIRS 183

Query: 691  NTQKDVIESLLPVVDNFEKAKQHIIPETEKGQKINTSYQSIYKQFVEILRSLRVSAVQTI 512
            + Q +VIESLLP+VD+FE+AKQ I PETE  +KI+TSYQ IYKQFVEI+RSL+V+ V T+
Sbjct: 184  DAQGEVIESLLPMVDSFERAKQQIKPETEMEKKIDTSYQGIYKQFVEIMRSLQVAVVATV 243

Query: 511  GKPFDPLLHEAIAREESQQFKEGVIIQETRRGFLLGDRVLRPAVVKVSTGSGHKKTLIPT 332
            GKPFDP LHEAIAREESQ++KEG+IIQE RRGFLLG R+LRPA+VKVS G G KK  +  
Sbjct: 244  GKPFDPSLHEAIAREESQEYKEGIIIQEFRRGFLLGGRLLRPAMVKVSAGPGRKKAPVGA 303

Query: 331  EESEGQPATAA 299
            E    QPATAA
Sbjct: 304  E----QPATAA 310


>ref|XP_004150939.1| PREDICTED: protein GrpE-like [Cucumis sativus]
          Length = 316

 Score =  244 bits (624), Expect = 2e-62
 Identities = 127/221 (57%), Positives = 166/221 (75%)
 Frame = -3

Query: 958 EVDEKKLKGSDLKNLIDAYKEAILNGDEKTVLDKEAFFSKLEDEKNALAEKVGALLPDIA 779
           E D  K  GS L+ LI+ Y+EA L+GD+KTV + EA    +  EK+ L+ K+  +  ++ 
Sbjct: 94  EKDGYKFDGSGLQTLIEVYREAFLDGDQKTVSEVEARIKIIGREKDELSRKLMNISTEMT 153

Query: 778 SQKENFIRTQADFENFRKQFEKDQLRLTFNTQKDVIESLLPVVDNFEKAKQHIIPETEKG 599
           S KE +IR QADF+NFRK+ EK+Q  +  N QK+V+ESLLP++D+F+KA+Q I+P+T+K 
Sbjct: 154 SGKEKYIRLQADFDNFRKRSEKEQHTVKNNAQKEVLESLLPMIDHFDKARQQIVPQTDKE 213

Query: 598 QKINTSYQSIYKQFVEILRSLRVSAVQTIGKPFDPLLHEAIAREESQQFKEGVIIQETRR 419
           +KI+ SYQ IYKQFVE LRS RVSAV T+G+PFDP LHEA+AREESQ+ KEG+IIQE RR
Sbjct: 214 KKIDISYQGIYKQFVETLRSWRVSAVATVGRPFDPSLHEAVAREESQEIKEGIIIQELRR 273

Query: 418 GFLLGDRVLRPAVVKVSTGSGHKKTLIPTEESEGQPATAAV 296
           GFLLG+R+LRPA VKVS G G K +   T + E QPA AAV
Sbjct: 274 GFLLGERLLRPARVKVSKGPGRKSS--RTVDGEQQPAAAAV 312


>ref|XP_004168166.1| PREDICTED: LOW QUALITY PROTEIN: protein GrpE-like [Cucumis sativus]
          Length = 316

 Score =  244 bits (623), Expect = 3e-62
 Identities = 127/221 (57%), Positives = 166/221 (75%)
 Frame = -3

Query: 958 EVDEKKLKGSDLKNLIDAYKEAILNGDEKTVLDKEAFFSKLEDEKNALAEKVGALLPDIA 779
           E D  K  GS L+ LI+ Y+EA L+GD+KTV + EA    +  EK+ L+ K+  +  ++ 
Sbjct: 94  EKDGYKFDGSGLQTLIEVYREAFLDGDQKTVSEVEARXKIIGREKDELSRKLMNISTEMT 153

Query: 778 SQKENFIRTQADFENFRKQFEKDQLRLTFNTQKDVIESLLPVVDNFEKAKQHIIPETEKG 599
           S KE +IR QADF+NFRK+ EK+Q  +  N QK+V+ESLLP++D+F+KA+Q I+P+T+K 
Sbjct: 154 SGKEKYIRLQADFDNFRKRSEKEQHTVKNNAQKEVLESLLPMIDHFDKARQQIVPQTDKE 213

Query: 598 QKINTSYQSIYKQFVEILRSLRVSAVQTIGKPFDPLLHEAIAREESQQFKEGVIIQETRR 419
           +KI+ SYQ IYKQFVE LRS RVSAV T+G+PFDP LHEA+AREESQ+ KEG+IIQE RR
Sbjct: 214 KKIDISYQGIYKQFVETLRSWRVSAVATVGRPFDPSLHEAVAREESQEIKEGIIIQELRR 273

Query: 418 GFLLGDRVLRPAVVKVSTGSGHKKTLIPTEESEGQPATAAV 296
           GFLLG+R+LRPA VKVS G G K +   T + E QPA AAV
Sbjct: 274 GFLLGERLLRPARVKVSKGPGRKSS--RTVDGEQQPAAAAV 312


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