BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012337
         (309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520439.1| helicase, putative [Ricinus communis] gi|223...   118   4e-25
ref|XP_002279903.2| PREDICTED: helicase SKI2W-like [Vitis vinifera]   117   1e-24
ref|XP_004153842.1| PREDICTED: helicase SKI2W-like, partial [Cuc...   115   3e-24
ref|XP_004145322.1| PREDICTED: helicase SKI2W-like [Cucumis sati...   115   3e-24
emb|CBI16013.3| unnamed protein product [Vitis vinifera]               90   2e-16

>ref|XP_002520439.1| helicase, putative [Ricinus communis] gi|223540281|gb|EEF41852.1|
           helicase, putative [Ricinus communis]
          Length = 1335

 Score =  118 bits (296), Expect = 4e-25
 Identities = 56/83 (67%), Positives = 67/83 (80%), Gaps = 6/83 (7%)
 Frame = +2

Query: 74  QQRENFNRGKQQKHSGTQNAGQFSGTA------GPNQSTWGARKSEASLWMQLINKLSKK 235
           ++RE  NR KQ KH G+QNAG FSGT+      G  Q+ WG+R+SEASLW+QL+NKLSKK
Sbjct: 577 KKREYLNRNKQNKHFGSQNAGSFSGTSWGNQNNGNGQNNWGSRRSEASLWLQLVNKLSKK 636

Query: 236 SLLPVIIFCFSKNRCDKSADNMT 304
           SLLPV+IFCFSKNRCDKSAD M+
Sbjct: 637 SLLPVVIFCFSKNRCDKSADGMS 659


>ref|XP_002279903.2| PREDICTED: helicase SKI2W-like [Vitis vinifera]
          Length = 1379

 Score =  117 bits (292), Expect = 1e-24
 Identities = 61/92 (66%), Positives = 68/92 (73%), Gaps = 6/92 (6%)
 Frame = +2

Query: 47  APHGGAPVRQQRENFNRGKQQKHSGTQNAGQFSGTAGPNQ------STWGARKSEASLWM 208
           A H GA   Q+REN  RGKQ K+SG+Q  G F GT G NQ      S WG+R+SEASLW+
Sbjct: 608 AAHDGARA-QRRENPGRGKQNKYSGSQKVGNFYGTGGGNQNSSGSQSNWGSRRSEASLWL 666

Query: 209 QLINKLSKKSLLPVIIFCFSKNRCDKSADNMT 304
            LINKLSKKSLLPV+IFCFSKNRCD SAD MT
Sbjct: 667 LLINKLSKKSLLPVVIFCFSKNRCDISADKMT 698


>ref|XP_004153842.1| PREDICTED: helicase SKI2W-like, partial [Cucumis sativus]
          Length = 520

 Score =  115 bits (289), Expect = 3e-24
 Identities = 58/95 (61%), Positives = 71/95 (74%), Gaps = 12/95 (12%)
 Frame = +2

Query: 53  HGGAPV------RQQRENFNRGKQQKHSGTQNAGQFSGTAGPNQ------STWGARKSEA 196
           H GA V       ++ E+FNR KQ KHSG+QN G FSGT+  NQ      + WG+R+S+A
Sbjct: 215 HAGASVANDGTKNRKVESFNRSKQNKHSGSQNLGNFSGTSWGNQKNGDGHNNWGSRRSDA 274

Query: 197 SLWMQLINKLSKKSLLPVIIFCFSKNRCDKSADNM 301
           SLW+ LIN+LSKKSLLPV+IFCFSKNRCDKSADN+
Sbjct: 275 SLWLLLINRLSKKSLLPVVIFCFSKNRCDKSADNI 309


>ref|XP_004145322.1| PREDICTED: helicase SKI2W-like [Cucumis sativus]
          Length = 1352

 Score =  115 bits (289), Expect = 3e-24
 Identities = 58/95 (61%), Positives = 71/95 (74%), Gaps = 12/95 (12%)
 Frame = +2

Query: 53  HGGAPV------RQQRENFNRGKQQKHSGTQNAGQFSGTAGPNQ------STWGARKSEA 196
           H GA V       ++ E+FNR KQ KHSG+QN G FSGT+  NQ      + WG+R+S+A
Sbjct: 583 HAGASVANDGTKNRKVESFNRSKQNKHSGSQNLGNFSGTSWGNQKNGDGHNNWGSRRSDA 642

Query: 197 SLWMQLINKLSKKSLLPVIIFCFSKNRCDKSADNM 301
           SLW+ LIN+LSKKSLLPV+IFCFSKNRCDKSADN+
Sbjct: 643 SLWLLLINRLSKKSLLPVVIFCFSKNRCDKSADNI 677


>emb|CBI16013.3| unnamed protein product [Vitis vinifera]
          Length = 1082

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 48/77 (62%), Positives = 52/77 (67%)
 Frame = +2

Query: 74  QQRENFNRGKQQKHSGTQNAGQFSGTAGPNQSTWGARKSEASLWMQLINKLSKKSLLPVI 253
           Q REN  RGKQ   S               QS WG+R+SEASLW+ LINKLSKKSLLPV+
Sbjct: 340 QGRENPGRGKQNNGS---------------QSNWGSRRSEASLWLLLINKLSKKSLLPVV 384

Query: 254 IFCFSKNRCDKSADNMT 304
           IFCFSKNRCD SAD MT
Sbjct: 385 IFCFSKNRCDISADKMT 401