BLASTX nr result
ID: Coptis24_contig00012335
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00012335
(616 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002323531.1| predicted protein [Populus trichocarpa] gi|2... 225 4e-57
emb|CAN84005.1| hypothetical protein VITISV_033733 [Vitis vinifera] 218 5e-55
ref|XP_002272910.2| PREDICTED: rop guanine nucleotide exchange f... 217 1e-54
emb|CBI30469.3| unnamed protein product [Vitis vinifera] 217 1e-54
ref|XP_002524258.1| Rop guanine nucleotide exchange factor, puta... 208 5e-52
>ref|XP_002323531.1| predicted protein [Populus trichocarpa] gi|222868161|gb|EEF05292.1|
predicted protein [Populus trichocarpa]
Length = 503
Score = 225 bits (574), Expect = 4e-57
Identities = 118/180 (65%), Positives = 137/180 (76%), Gaps = 7/180 (3%)
Frame = +1
Query: 1 MVDVDKRGLLADRAESLLLCLKQRFPGLPQTALDMSKIQFNKDVGKSILESYSRVLESLA 180
M+DVDKR LLADRAESLLLCLKQRFPGLPQT LDMSKIQ+NKDVGKSILESYSRVLESLA
Sbjct: 297 MIDVDKRDLLADRAESLLLCLKQRFPGLPQTTLDMSKIQYNKDVGKSILESYSRVLESLA 356
Query: 181 SNIVTRIDDVLYVDDLTKHSDQFVSASTVSVIAHNRVSTPYPVPVSGTQCGASFTNPSFT 360
NIV RIDD+LYVDDLTKHSD F S S VSVIAH V+ PY VP S + +FT PSF+
Sbjct: 357 FNIVARIDDLLYVDDLTKHSDHFSSISKVSVIAHKSVTIPYSVPASNSPYKTAFTTPSFS 416
Query: 361 P----APPFGS---FLNNSKLPHHANGMKKVLTNYLGIDTKGKIAGNVVEGSLSILSTRP 519
P +P G F+ + K+P H G+KKVLT+YL IDTKG+ G +EG+ +++ P
Sbjct: 417 PGQRISPVKGDRSPFMTSGKIPQHGLGVKKVLTDYLSIDTKGRDGGITIEGTDNVIRNTP 476
>emb|CAN84005.1| hypothetical protein VITISV_033733 [Vitis vinifera]
Length = 640
Score = 218 bits (556), Expect = 5e-55
Identities = 119/183 (65%), Positives = 136/183 (74%), Gaps = 7/183 (3%)
Frame = +1
Query: 1 MVDVDKRGLLADRAESLLLCLKQRFPGLPQTALDMSKIQFNKDVGKSILESYSRVLESLA 180
MVD DKR LLA+RAESLL C+KQRFPGLPQT LDMSKIQ+NKDVGKSILESYSRVLESLA
Sbjct: 431 MVDADKRELLAERAESLLHCMKQRFPGLPQTTLDMSKIQYNKDVGKSILESYSRVLESLA 490
Query: 181 SNIVTRIDDVLYVDDLTKHSDQFVSASTVSVIAHNRVSTPYPVPVSGTQCGASFTNPSFT 360
SNIV RIDDVLYVDDLTKHSDQ +S S V V+AH VS PY VPV T +FT PSF+
Sbjct: 491 SNIVARIDDVLYVDDLTKHSDQLLSISKVGVVAHKGVSIPYSVPVPNTPYKTAFTTPSFS 550
Query: 361 P----APPFGS---FLNNSKLPHHANGMKKVLTNYLGIDTKGKIAGNVVEGSLSILSTRP 519
P +P G F+N+ L H G+KKVLT+YL IDTK + G +EG SI +T
Sbjct: 551 PGQLVSPANGDSSPFINDCNLLHRGFGVKKVLTDYLSIDTKERGCGKPIEGXESISNTVX 610
Query: 520 EAT 528
+A+
Sbjct: 611 DAS 613
>ref|XP_002272910.2| PREDICTED: rop guanine nucleotide exchange factor 1-like [Vitis
vinifera]
Length = 701
Score = 217 bits (553), Expect = 1e-54
Identities = 119/183 (65%), Positives = 136/183 (74%), Gaps = 7/183 (3%)
Frame = +1
Query: 1 MVDVDKRGLLADRAESLLLCLKQRFPGLPQTALDMSKIQFNKDVGKSILESYSRVLESLA 180
MVD DKR LLA+RAESLL C+KQRFPGLPQT LDMSKIQ+NKDVGKSILESYSRVLESLA
Sbjct: 492 MVDADKRELLAERAESLLHCMKQRFPGLPQTTLDMSKIQYNKDVGKSILESYSRVLESLA 551
Query: 181 SNIVTRIDDVLYVDDLTKHSDQFVSASTVSVIAHNRVSTPYPVPVSGTQCGASFTNPSFT 360
SNIV RIDDVLYVDDLTKHSDQ +S S V V+AH VS PY VPV T +FT PSF+
Sbjct: 552 SNIVARIDDVLYVDDLTKHSDQLLSISKVGVMAHKGVSIPYSVPVPNTPYKTAFTTPSFS 611
Query: 361 P----APPFGS---FLNNSKLPHHANGMKKVLTNYLGIDTKGKIAGNVVEGSLSILSTRP 519
P +P G F+N+ L H G+KKVLT+YL IDTK + G +EG SI +T
Sbjct: 612 PGQLVSPANGDRSPFINDCNLLHRGFGVKKVLTDYLSIDTKERGCGKPIEGLESISNTVQ 671
Query: 520 EAT 528
+A+
Sbjct: 672 DAS 674
>emb|CBI30469.3| unnamed protein product [Vitis vinifera]
Length = 1231
Score = 217 bits (553), Expect = 1e-54
Identities = 119/183 (65%), Positives = 136/183 (74%), Gaps = 7/183 (3%)
Frame = +1
Query: 1 MVDVDKRGLLADRAESLLLCLKQRFPGLPQTALDMSKIQFNKDVGKSILESYSRVLESLA 180
MVD DKR LLA+RAESLL C+KQRFPGLPQT LDMSKIQ+NKDVGKSILESYSRVLESLA
Sbjct: 1022 MVDADKRELLAERAESLLHCMKQRFPGLPQTTLDMSKIQYNKDVGKSILESYSRVLESLA 1081
Query: 181 SNIVTRIDDVLYVDDLTKHSDQFVSASTVSVIAHNRVSTPYPVPVSGTQCGASFTNPSFT 360
SNIV RIDDVLYVDDLTKHSDQ +S S V V+AH VS PY VPV T +FT PSF+
Sbjct: 1082 SNIVARIDDVLYVDDLTKHSDQLLSISKVGVMAHKGVSIPYSVPVPNTPYKTAFTTPSFS 1141
Query: 361 P----APPFGS---FLNNSKLPHHANGMKKVLTNYLGIDTKGKIAGNVVEGSLSILSTRP 519
P +P G F+N+ L H G+KKVLT+YL IDTK + G +EG SI +T
Sbjct: 1142 PGQLVSPANGDRSPFINDCNLLHRGFGVKKVLTDYLSIDTKERGCGKPIEGLESISNTVQ 1201
Query: 520 EAT 528
+A+
Sbjct: 1202 DAS 1204
Score = 147 bits (370), Expect = 2e-33
Identities = 83/163 (50%), Positives = 106/163 (65%), Gaps = 7/163 (4%)
Frame = +1
Query: 1 MVDVDKRGLLADRAESLLLCLKQRFPGLPQTALDMSKIQFNKDVGKSILESYSRVLESLA 180
M D DK +A+RAESLL C+KQRFPGLPQT L+MSK+QFNKD+GKSILESYSRVLESLA
Sbjct: 465 MADADKTESIAERAESLLFCIKQRFPGLPQTTLEMSKVQFNKDIGKSILESYSRVLESLA 524
Query: 181 SNIVTRIDDVLYVDDLTKHSDQFVSASTVSVIAHNRVSTPYPVPVSGTQCGASFTNPSFT 360
++I+ R+DD+LY+DDLT +QF+ + V V AH +S PY +PVS T + T +
Sbjct: 525 ADILVRVDDLLYMDDLT---NQFLPITRVGVTAHESISIPYLLPVSSTPIETAVTTSGVS 581
Query: 361 ------PAPPFGS-FLNNSKLPHHANGMKKVLTNYLGIDTKGK 468
PA S F SKL +K T++ + KGK
Sbjct: 582 QGQQVIPAKAETSPFFKPSKLLLRGLSKRKPSTDFQNTERKGK 624
>ref|XP_002524258.1| Rop guanine nucleotide exchange factor, putative [Ricinus communis]
gi|223536535|gb|EEF38182.1| Rop guanine nucleotide
exchange factor, putative [Ricinus communis]
Length = 590
Score = 208 bits (530), Expect = 5e-52
Identities = 117/181 (64%), Positives = 133/181 (73%), Gaps = 16/181 (8%)
Frame = +1
Query: 1 MVDVDKRGLLADRAESLLLCLKQRFPGLPQTALDMSKIQFNKDVGKSILESYSRVLESLA 180
MVD DKR LLA+RAESLLL LKQRFP L QT LD SKIQFNKDVGKSILESYSR+LESLA
Sbjct: 380 MVDGDKRELLAERAESLLLSLKQRFPSLSQTTLDTSKIQFNKDVGKSILESYSRILESLA 439
Query: 181 SNIVTRIDDVLYVDDLTKHSDQFVSASTVSVIAHNRVSTPYPVPVSGTQCGASFTNPSFT 360
NIV RIDD+LYVDDLTKHSD+ + STVSVIAH +V+ PY VPVSGT +F+ PSF+
Sbjct: 440 FNIVARIDDLLYVDDLTKHSDK-LQVSTVSVIAHKKVTIPYSVPVSGTPYRTTFSTPSFS 498
Query: 361 PAP----------PF-----GSFLNNSKLPHHAN-GMKKVLTNYLGIDTKGKIAGNVVEG 492
PAP PF + NNS PH G+K+VLTNYLG+D+K +I GN EG
Sbjct: 499 PAPLISPARGERTPFLPNAATAATNNSNKPHRRGFGVKRVLTNYLGVDSKPRICGNSTEG 558
Query: 493 S 495
S
Sbjct: 559 S 559