BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012325
         (403 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15935.3| unnamed protein product [Vitis vinifera]               68   9e-10
ref|XP_002278840.2| PREDICTED: uncharacterized protein LOC100243...    66   3e-09
ref|XP_003625981.1| Chromodomain-helicase-DNA-binding protein [M...    65   4e-09
ref|XP_002864874.1| PHD finger family protein [Arabidopsis lyrat...    62   4e-08
ref|NP_201195.1| Acyl-CoA N-acyltransferase with RING/FYVE/PHD-t...    60   2e-07

>emb|CBI15935.3| unnamed protein product [Vitis vinifera]
          Length = 687

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 39/95 (41%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
 Frame = +2

Query: 122 SKSPSLNPVSDDEDA-IEIECCPKAVT*WNETGYDKSKVKLVNESRSTRDMTLRANKHLL 298
           S+    +P  DD+   I+ E CP AV  +   G DK   +   +   T ++  +A KHL 
Sbjct: 60  SEQEKTDPCRDDDLVDIDREYCPHAVINYYSLGLDKKDYR--RKDSVTSNLIAKAKKHLS 117

Query: 299 AVGWILWYITKMKNKRELRYTSPKGKTYISLIKAC 403
            +GW+ WY  K K KRELRY SPKG+ Y SL  AC
Sbjct: 118 FMGWLFWYAYK-KGKRELRYCSPKGRCYYSLRTAC 151


>ref|XP_002278840.2| PREDICTED: uncharacterized protein LOC100243375 [Vitis vinifera]
          Length = 1332

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 37/94 (39%), Positives = 50/94 (53%)
 Frame = +2

Query: 122 SKSPSLNPVSDDEDAIEIECCPKAVT*WNETGYDKSKVKLVNESRSTRDMTLRANKHLLA 301
           SK     P  DD   I+ E CP+AV  +   G DK +     +   + ++  +A KHL  
Sbjct: 553 SKGKWTVPSHDDRVDIDHEYCPQAVVNYYFLGLDKKEHHSRKDDIRSLNLKSKAKKHLSF 612

Query: 302 VGWILWYITKMKNKRELRYTSPKGKTYISLIKAC 403
           +GW  WY  + + KRE+RY SPKGK Y SL  AC
Sbjct: 613 MGWTFWYAYR-RGKREMRYFSPKGKCYYSLRTAC 645


>ref|XP_003625981.1| Chromodomain-helicase-DNA-binding protein [Medicago truncatula]
           gi|355500996|gb|AES82199.1|
           Chromodomain-helicase-DNA-binding protein [Medicago
           truncatula]
          Length = 796

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 37/79 (46%), Positives = 47/79 (59%)
 Frame = +2

Query: 167 IEIECCPKAVT*WNETGYDKSKVKLVNESRSTRDMTLRANKHLLAVGWILWYITKMKNKR 346
           IE E CP+AV  W    Y  + +K   ES   +D+ L+A +HL  +GW  WYI K K + 
Sbjct: 12  IEPEYCPQAVFEW----YRLTGLKDRKESFRRKDLALKAKQHLFYLGWRFWYIDK-KCRW 66

Query: 347 ELRYTSPKGKTYISLIKAC 403
           ELRYTSP  K Y +L KAC
Sbjct: 67  ELRYTSPNAKNYTTLRKAC 85


>ref|XP_002864874.1| PHD finger family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297310709|gb|EFH41133.1| PHD finger family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 555

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 31/79 (39%), Positives = 46/79 (58%)
 Frame = +2

Query: 167 IEIECCPKAVT*WNETGYDKSKVKLVNESRSTRDMTLRANKHLLAVGWILWYITKMKNKR 346
           +E E  P A+  W  T       K++ + +   D+ ++  +HL A+GW++ Y  K  NKR
Sbjct: 9   MEAELSPGAIEQWIST---VKNGKMIEKGKRRSDLAIKVRRHLSALGWVISYFNK-GNKR 64

Query: 347 ELRYTSPKGKTYISLIKAC 403
           ELRY SPKG+ + SL KAC
Sbjct: 65  ELRYKSPKGRWFYSLAKAC 83


>ref|NP_201195.1| Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger
           domain [Arabidopsis thaliana]
           gi|10177678|dbj|BAB11038.1| unnamed protein product
           [Arabidopsis thaliana] gi|225879156|dbj|BAH30648.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332010430|gb|AED97813.1| Acyl-CoA N-acyltransferase
           with RING/FYVE/PHD-type zinc finger domain [Arabidopsis
           thaliana]
          Length = 557

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 30/79 (37%), Positives = 45/79 (56%)
 Frame = +2

Query: 167 IEIECCPKAVT*WNETGYDKSKVKLVNESRSTRDMTLRANKHLLAVGWILWYITKMKNKR 346
           +E E  P A+  W  T       K+    +   D++++  +HL A+GW++ Y  K +NK+
Sbjct: 9   MEAELSPGAIEEWLST---VKHGKMTENGKRRSDLSIKVKRHLSALGWVISYYNK-RNKK 64

Query: 347 ELRYTSPKGKTYISLIKAC 403
           E RY SPKGK + SL KAC
Sbjct: 65  EQRYKSPKGKWFYSLAKAC 83