BLASTX nr result

ID: Coptis24_contig00012323 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012323
         (818 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACU19245.1| unknown [Glycine max]                                  194   2e-47
gb|ABK92874.1| unknown [Populus trichocarpa]                          192   7e-47
ref|XP_002281185.1| PREDICTED: uncharacterized protein LOC100246...   192   1e-46
ref|XP_002316703.1| predicted protein [Populus trichocarpa] gi|2...   191   1e-46
ref|XP_003539881.1| PREDICTED: uncharacterized protein LOC100787...   191   2e-46

>gb|ACU19245.1| unknown [Glycine max]
          Length = 160

 Score =  194 bits (493), Expect = 2e-47
 Identities = 84/158 (53%), Positives = 117/158 (74%)
 Frame = +1

Query: 202 MSKAVGALVCLLIVIMDVXXXXXXXXXXXXQNKVKHLRLLIFECTEPSHDAFMXXXXXXX 381
           M++  G  +CLLI++MDV            QNKVKHLRL IFEC EPSH AFM       
Sbjct: 1   MARVAGIFLCLLILVMDVAAGILGFEAEIAQNKVKHLRLWIFECREPSHQAFMLGLGAAV 60

Query: 382 XXXXXHVTANLLGGCICMCSKEEFDRSSANKQLATACLVLSWIIVAVGFSLLIIGTLSNS 561
                H  ANLLGGC C+CS++EF+++S+N+QL+TACL+L+W+++A+G S+L+IGT+SN+
Sbjct: 61  LLGLAHAIANLLGGCNCICSQQEFEKASSNRQLSTACLILTWVVLAIGLSMLVIGTMSNN 120

Query: 562 KSRASCGLTHHRYLSIGGILCFVHGLFCVSYCIFASST 675
           +S  SCG +HH +LSIGGI CFVHGLFC++Y +FA+++
Sbjct: 121 RSDGSCGFSHHHFLSIGGICCFVHGLFCIAYYVFATAS 158


>gb|ABK92874.1| unknown [Populus trichocarpa]
          Length = 168

 Score =  192 bits (488), Expect = 7e-47
 Identities = 92/157 (58%), Positives = 111/157 (70%)
 Frame = +1

Query: 202 MSKAVGALVCLLIVIMDVXXXXXXXXXXXXQNKVKHLRLLIFECTEPSHDAFMXXXXXXX 381
           M K  G LVCLLIV MDV            QNKVKHLRL IFEC +PS DAF        
Sbjct: 1   MVKIGGVLVCLLIVAMDVVAGILGIQADIAQNKVKHLRLWIFECRDPSQDAFKLGLAAAG 60

Query: 382 XXXXXHVTANLLGGCICMCSKEEFDRSSANKQLATACLVLSWIIVAVGFSLLIIGTLSNS 561
                HV ANLLGGC+C+CS+EE  R+S N+QL+ AC + +WII+AVG S+L+IGT+SN+
Sbjct: 61  VLGLAHVIANLLGGCMCICSQEELQRASPNRQLSVACFLFTWIILAVGLSMLVIGTMSNN 120

Query: 562 KSRASCGLTHHRYLSIGGILCFVHGLFCVSYCIFASS 672
           KSRASCG THH + SIGGILCFVHGLFCV+Y + A++
Sbjct: 121 KSRASCGFTHHHFFSIGGILCFVHGLFCVAYYVSATA 157


>ref|XP_002281185.1| PREDICTED: uncharacterized protein LOC100246598 [Vitis vinifera]
           gi|297739331|emb|CBI28982.3| unnamed protein product
           [Vitis vinifera]
          Length = 168

 Score =  192 bits (487), Expect = 1e-46
 Identities = 90/157 (57%), Positives = 111/157 (70%)
 Frame = +1

Query: 202 MSKAVGALVCLLIVIMDVXXXXXXXXXXXXQNKVKHLRLLIFECTEPSHDAFMXXXXXXX 381
           M+K  G  VC+LIV MDV            QNKVKHLRL IFEC EPS DAF        
Sbjct: 1   MAKLCGLFVCMLIVAMDVGAGILGIEAEVAQNKVKHLRLWIFECREPSEDAFKLGLAAAA 60

Query: 382 XXXXXHVTANLLGGCICMCSKEEFDRSSANKQLATACLVLSWIIVAVGFSLLIIGTLSNS 561
                H+ +NLLGGC+C+CS+E+F ++S N+QL+  CLV SWII+AVGFS+L+IGTLSN 
Sbjct: 61  LLAFAHILSNLLGGCMCICSQEDFQKASPNRQLSVVCLVFSWIILAVGFSMLVIGTLSNH 120

Query: 562 KSRASCGLTHHRYLSIGGILCFVHGLFCVSYCIFASS 672
           KSR SCG +HH +LSIGGILCFVH LFCV+Y + A++
Sbjct: 121 KSRTSCGFSHHHFLSIGGILCFVHALFCVAYYVSATA 157


>ref|XP_002316703.1| predicted protein [Populus trichocarpa] gi|222859768|gb|EEE97315.1|
           predicted protein [Populus trichocarpa]
          Length = 163

 Score =  191 bits (486), Expect = 1e-46
 Identities = 94/158 (59%), Positives = 114/158 (72%)
 Frame = +1

Query: 202 MSKAVGALVCLLIVIMDVXXXXXXXXXXXXQNKVKHLRLLIFECTEPSHDAFMXXXXXXX 381
           M+K +G LVCLLI+ +DV            QNKVKHL++ IF+C +PSH AF        
Sbjct: 1   MAKNIGFLVCLLIMALDVVAGILGIEAEMAQNKVKHLKMWIFDCRDPSHQAFKLGLAAVI 60

Query: 382 XXXXXHVTANLLGGCICMCSKEEFDRSSANKQLATACLVLSWIIVAVGFSLLIIGTLSNS 561
                HV A LLGGC CMCSKEEF+++SANKQLA A L  SWII+A+GFSLLIIGT++NS
Sbjct: 61  LLSLAHVVATLLGGCTCMCSKEEFNKASANKQLAVASLFFSWIILAIGFSLLIIGTMANS 120

Query: 562 KSRASCGLTHHRYLSIGGILCFVHGLFCVSYCIFASST 675
           KSR  CGL+H+R LSIGGILCFVHGLF VSY + A++T
Sbjct: 121 KSRKLCGLSHNRVLSIGGILCFVHGLFTVSYYVSATAT 158


>ref|XP_003539881.1| PREDICTED: uncharacterized protein LOC100787042 [Glycine max]
          Length = 160

 Score =  191 bits (485), Expect = 2e-46
 Identities = 83/158 (52%), Positives = 116/158 (73%)
 Frame = +1

Query: 202 MSKAVGALVCLLIVIMDVXXXXXXXXXXXXQNKVKHLRLLIFECTEPSHDAFMXXXXXXX 381
           M++  G  +CLLI++MDV            QNKVKHLRL IFEC EPSH AFM       
Sbjct: 1   MARVAGIFLCLLILVMDVAAGILGFEAEIAQNKVKHLRLWIFECREPSHQAFMLGLGAAV 60

Query: 382 XXXXXHVTANLLGGCICMCSKEEFDRSSANKQLATACLVLSWIIVAVGFSLLIIGTLSNS 561
                H  ANLLGGC C+CS++EF+++S+N+QL+TACL+L+W+++A+G S+L+IGT+SN+
Sbjct: 61  LLGLAHAIANLLGGCNCICSQQEFEKASSNRQLSTACLILTWVVLAIGLSMLVIGTMSNN 120

Query: 562 KSRASCGLTHHRYLSIGGILCFVHGLFCVSYCIFASST 675
           +S  SCG +HH +LSIGGI CFVHGLFC++Y + A+++
Sbjct: 121 RSDGSCGFSHHHFLSIGGICCFVHGLFCIAYYVSATAS 158


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