BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012313
         (253 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273156.2| PREDICTED: pentatricopeptide repeat-containi...   124   6e-27
emb|CBI24939.3| unnamed protein product [Vitis vinifera]              124   6e-27
ref|XP_002517779.1| pentatricopeptide repeat-containing protein,...   122   3e-26
ref|XP_003544432.1| PREDICTED: pentatricopeptide repeat-containi...   117   1e-24
ref|XP_002313317.1| predicted protein [Populus trichocarpa] gi|2...   117   1e-24

>ref|XP_002273156.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g53170-like [Vitis vinifera]
          Length = 538

 Score =  124 bits (312), Expect = 6e-27
 Identities = 57/83 (68%), Positives = 69/83 (83%)
 Frame = +3

Query: 3   KISLILRQVENSDVVLDTPFFNCVISAYGQVGELQRMEEMFVEMKRRKCMPDNITFATMI 182
           K+  ILRQ+ENSDV LDTPFFNCV+SAYGQ G+++RM E+F+ MK RKC PDNITFATMI
Sbjct: 393 KVDSILRQIENSDVTLDTPFFNCVLSAYGQAGDVERMGELFLVMKERKCKPDNITFATMI 452

Query: 183 QAYTAQGMTESAQQLETSLLNRK 251
           QAY AQGM E+AQ LE +++  K
Sbjct: 453 QAYNAQGMIEAAQNLEVNMITTK 475


>emb|CBI24939.3| unnamed protein product [Vitis vinifera]
          Length = 485

 Score =  124 bits (312), Expect = 6e-27
 Identities = 57/83 (68%), Positives = 69/83 (83%)
 Frame = +3

Query: 3   KISLILRQVENSDVVLDTPFFNCVISAYGQVGELQRMEEMFVEMKRRKCMPDNITFATMI 182
           K+  ILRQ+ENSDV LDTPFFNCV+SAYGQ G+++RM E+F+ MK RKC PDNITFATMI
Sbjct: 393 KVDSILRQIENSDVTLDTPFFNCVLSAYGQAGDVERMGELFLVMKERKCKPDNITFATMI 452

Query: 183 QAYTAQGMTESAQQLETSLLNRK 251
           QAY AQGM E+AQ LE +++  K
Sbjct: 453 QAYNAQGMIEAAQNLEVNMITTK 475


>ref|XP_002517779.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223543051|gb|EEF44586.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 486

 Score =  122 bits (306), Expect = 3e-26
 Identities = 56/83 (67%), Positives = 70/83 (84%)
 Frame = +3

Query: 3   KISLILRQVENSDVVLDTPFFNCVISAYGQVGELQRMEEMFVEMKRRKCMPDNITFATMI 182
           K++ ILRQVENSDVVLDT FFNC+I+AYGQ G++ +M E+F+EM+ R+CMPDN+TFATMI
Sbjct: 393 KVNSILRQVENSDVVLDTTFFNCIINAYGQAGDVDKMAELFLEMRERECMPDNVTFATMI 452

Query: 183 QAYTAQGMTESAQQLETSLLNRK 251
           QAY  QGMTE+AQ LE  +L  K
Sbjct: 453 QAYRGQGMTEAAQALEKMMLAAK 475


>ref|XP_003544432.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g53170-like [Glycine max]
          Length = 481

 Score =  117 bits (293), Expect = 1e-24
 Identities = 53/83 (63%), Positives = 66/83 (79%)
 Frame = +3

Query: 3   KISLILRQVENSDVVLDTPFFNCVISAYGQVGELQRMEEMFVEMKRRKCMPDNITFATMI 182
           K+  I+R VENSDVVLDTPFFNC+ISAYGQ G L++M E+F+ M+ RKC PDNITFA MI
Sbjct: 389 KVDSIMRHVENSDVVLDTPFFNCIISAYGQAGNLKKMGELFLAMRERKCEPDNITFACMI 448

Query: 183 QAYTAQGMTESAQQLETSLLNRK 251
           Q+Y  QGMTE+ Q LE  +++ K
Sbjct: 449 QSYNTQGMTEAVQNLENMMISAK 471


>ref|XP_002313317.1| predicted protein [Populus trichocarpa] gi|222849725|gb|EEE87272.1|
           predicted protein [Populus trichocarpa]
          Length = 474

 Score =  117 bits (293), Expect = 1e-24
 Identities = 53/80 (66%), Positives = 68/80 (85%)
 Frame = +3

Query: 3   KISLILRQVENSDVVLDTPFFNCVISAYGQVGELQRMEEMFVEMKRRKCMPDNITFATMI 182
           K+  ILRQVENSDV+LDTPFFNCVISAYG+ G++++M E+F+ M+ RKC PD+ITFATMI
Sbjct: 380 KVDSILRQVENSDVILDTPFFNCVISAYGRAGDIEKMSELFLGMEGRKCKPDSITFATMI 439

Query: 183 QAYTAQGMTESAQQLETSLL 242
           QAY AQGM E+AQ +E  ++
Sbjct: 440 QAYNAQGMIEAAQGMENMMI 459