BLASTX nr result
ID: Coptis24_contig00012313
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00012313 (253 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002273156.2| PREDICTED: pentatricopeptide repeat-containi... 124 6e-27 emb|CBI24939.3| unnamed protein product [Vitis vinifera] 124 6e-27 ref|XP_002517779.1| pentatricopeptide repeat-containing protein,... 122 3e-26 ref|XP_003544432.1| PREDICTED: pentatricopeptide repeat-containi... 117 1e-24 ref|XP_002313317.1| predicted protein [Populus trichocarpa] gi|2... 117 1e-24 >ref|XP_002273156.2| PREDICTED: pentatricopeptide repeat-containing protein At3g53170-like [Vitis vinifera] Length = 538 Score = 124 bits (312), Expect = 6e-27 Identities = 57/83 (68%), Positives = 69/83 (83%) Frame = +3 Query: 3 KISLILRQVENSDVVLDTPFFNCVISAYGQVGELQRMEEMFVEMKRRKCMPDNITFATMI 182 K+ ILRQ+ENSDV LDTPFFNCV+SAYGQ G+++RM E+F+ MK RKC PDNITFATMI Sbjct: 393 KVDSILRQIENSDVTLDTPFFNCVLSAYGQAGDVERMGELFLVMKERKCKPDNITFATMI 452 Query: 183 QAYTAQGMTESAQQLETSLLNRK 251 QAY AQGM E+AQ LE +++ K Sbjct: 453 QAYNAQGMIEAAQNLEVNMITTK 475 >emb|CBI24939.3| unnamed protein product [Vitis vinifera] Length = 485 Score = 124 bits (312), Expect = 6e-27 Identities = 57/83 (68%), Positives = 69/83 (83%) Frame = +3 Query: 3 KISLILRQVENSDVVLDTPFFNCVISAYGQVGELQRMEEMFVEMKRRKCMPDNITFATMI 182 K+ ILRQ+ENSDV LDTPFFNCV+SAYGQ G+++RM E+F+ MK RKC PDNITFATMI Sbjct: 393 KVDSILRQIENSDVTLDTPFFNCVLSAYGQAGDVERMGELFLVMKERKCKPDNITFATMI 452 Query: 183 QAYTAQGMTESAQQLETSLLNRK 251 QAY AQGM E+AQ LE +++ K Sbjct: 453 QAYNAQGMIEAAQNLEVNMITTK 475 >ref|XP_002517779.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223543051|gb|EEF44586.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 486 Score = 122 bits (306), Expect = 3e-26 Identities = 56/83 (67%), Positives = 70/83 (84%) Frame = +3 Query: 3 KISLILRQVENSDVVLDTPFFNCVISAYGQVGELQRMEEMFVEMKRRKCMPDNITFATMI 182 K++ ILRQVENSDVVLDT FFNC+I+AYGQ G++ +M E+F+EM+ R+CMPDN+TFATMI Sbjct: 393 KVNSILRQVENSDVVLDTTFFNCIINAYGQAGDVDKMAELFLEMRERECMPDNVTFATMI 452 Query: 183 QAYTAQGMTESAQQLETSLLNRK 251 QAY QGMTE+AQ LE +L K Sbjct: 453 QAYRGQGMTEAAQALEKMMLAAK 475 >ref|XP_003544432.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53170-like [Glycine max] Length = 481 Score = 117 bits (293), Expect = 1e-24 Identities = 53/83 (63%), Positives = 66/83 (79%) Frame = +3 Query: 3 KISLILRQVENSDVVLDTPFFNCVISAYGQVGELQRMEEMFVEMKRRKCMPDNITFATMI 182 K+ I+R VENSDVVLDTPFFNC+ISAYGQ G L++M E+F+ M+ RKC PDNITFA MI Sbjct: 389 KVDSIMRHVENSDVVLDTPFFNCIISAYGQAGNLKKMGELFLAMRERKCEPDNITFACMI 448 Query: 183 QAYTAQGMTESAQQLETSLLNRK 251 Q+Y QGMTE+ Q LE +++ K Sbjct: 449 QSYNTQGMTEAVQNLENMMISAK 471 >ref|XP_002313317.1| predicted protein [Populus trichocarpa] gi|222849725|gb|EEE87272.1| predicted protein [Populus trichocarpa] Length = 474 Score = 117 bits (293), Expect = 1e-24 Identities = 53/80 (66%), Positives = 68/80 (85%) Frame = +3 Query: 3 KISLILRQVENSDVVLDTPFFNCVISAYGQVGELQRMEEMFVEMKRRKCMPDNITFATMI 182 K+ ILRQVENSDV+LDTPFFNCVISAYG+ G++++M E+F+ M+ RKC PD+ITFATMI Sbjct: 380 KVDSILRQVENSDVILDTPFFNCVISAYGRAGDIEKMSELFLGMEGRKCKPDSITFATMI 439 Query: 183 QAYTAQGMTESAQQLETSLL 242 QAY AQGM E+AQ +E ++ Sbjct: 440 QAYNAQGMIEAAQGMENMMI 459