BLASTX nr result

ID: Coptis24_contig00012311 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012311
         (329 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631993.1| PREDICTED: homocysteine S-methyltransferase ...   157   8e-37
ref|XP_002283054.1| PREDICTED: homocysteine S-methyltransferase ...   157   8e-37
ref|XP_002283044.1| PREDICTED: homocysteine S-methyltransferase ...   157   8e-37
ref|XP_002524742.1| 5-methyltetrahydrofolate:homocysteine methyl...   149   2e-34
ref|XP_002517092.1| 5-methyltetrahydrofolate:homocysteine methyl...   149   3e-34

>ref|XP_003631993.1| PREDICTED: homocysteine S-methyltransferase 3 [Vitis vinifera]
          Length = 310

 Score =  157 bits (397), Expect = 8e-37
 Identities = 78/89 (87%), Positives = 82/89 (92%)
 Frame = +3

Query: 63  NNGYAVIDGGLATELERHGANLNDPLWSATCLIHSPQLIRRVHLDYLEAGADIIITASYQ 242
           + GYAVIDGGLATELERHGA+LNDPLWSATCLIHSP LIRRVHLDYLEAGA IIITASYQ
Sbjct: 19  SGGYAVIDGGLATELERHGADLNDPLWSATCLIHSPDLIRRVHLDYLEAGASIIITASYQ 78

Query: 243 ATIQGFEAKGLSTQESETLLNRSVEIALE 329
           ATIQGFEAKGLS +E+E LL RSVEIA E
Sbjct: 79  ATIQGFEAKGLSREEAEVLLRRSVEIACE 107


>ref|XP_002283054.1| PREDICTED: homocysteine S-methyltransferase 3 isoform 2 [Vitis
           vinifera]
          Length = 303

 Score =  157 bits (397), Expect = 8e-37
 Identities = 78/89 (87%), Positives = 82/89 (92%)
 Frame = +3

Query: 63  NNGYAVIDGGLATELERHGANLNDPLWSATCLIHSPQLIRRVHLDYLEAGADIIITASYQ 242
           + GYAVIDGGLATELERHGA+LNDPLWSATCLIHSP LIRRVHLDYLEAGA IIITASYQ
Sbjct: 19  SGGYAVIDGGLATELERHGADLNDPLWSATCLIHSPDLIRRVHLDYLEAGASIIITASYQ 78

Query: 243 ATIQGFEAKGLSTQESETLLNRSVEIALE 329
           ATIQGFEAKGLS +E+E LL RSVEIA E
Sbjct: 79  ATIQGFEAKGLSREEAEVLLRRSVEIACE 107


>ref|XP_002283044.1| PREDICTED: homocysteine S-methyltransferase 3 isoform 1 [Vitis
           vinifera] gi|297737089|emb|CBI26290.3| unnamed protein
           product [Vitis vinifera]
          Length = 330

 Score =  157 bits (397), Expect = 8e-37
 Identities = 78/89 (87%), Positives = 82/89 (92%)
 Frame = +3

Query: 63  NNGYAVIDGGLATELERHGANLNDPLWSATCLIHSPQLIRRVHLDYLEAGADIIITASYQ 242
           + GYAVIDGGLATELERHGA+LNDPLWSATCLIHSP LIRRVHLDYLEAGA IIITASYQ
Sbjct: 19  SGGYAVIDGGLATELERHGADLNDPLWSATCLIHSPDLIRRVHLDYLEAGASIIITASYQ 78

Query: 243 ATIQGFEAKGLSTQESETLLNRSVEIALE 329
           ATIQGFEAKGLS +E+E LL RSVEIA E
Sbjct: 79  ATIQGFEAKGLSREEAEVLLRRSVEIACE 107


>ref|XP_002524742.1| 5-methyltetrahydrofolate:homocysteine methyltransferase, putative
           [Ricinus communis] gi|223535926|gb|EEF37585.1|
           5-methyltetrahydrofolate:homocysteine methyltransferase,
           putative [Ricinus communis]
          Length = 343

 Score =  149 bits (376), Expect = 2e-34
 Identities = 76/100 (76%), Positives = 83/100 (83%)
 Frame = +3

Query: 30  PASLALEEYLNNNGYAVIDGGLATELERHGANLNDPLWSATCLIHSPQLIRRVHLDYLEA 209
           P+SL  +    + G AVIDGGLATELERHGA+LNDPLWSA CL+ SP LIR VHLDYLEA
Sbjct: 9   PSSLMTDFLKQSGGVAVIDGGLATELERHGADLNDPLWSAKCLLTSPHLIRMVHLDYLEA 68

Query: 210 GADIIITASYQATIQGFEAKGLSTQESETLLNRSVEIALE 329
           GADIIITASYQATIQGFEAKG S+ ESE LL +SVEIA E
Sbjct: 69  GADIIITASYQATIQGFEAKGFSSAESEALLKKSVEIACE 108


>ref|XP_002517092.1| 5-methyltetrahydrofolate:homocysteine methyltransferase, putative
           [Ricinus communis] gi|223543727|gb|EEF45255.1|
           5-methyltetrahydrofolate:homocysteine methyltransferase,
           putative [Ricinus communis]
          Length = 348

 Score =  149 bits (375), Expect = 3e-34
 Identities = 72/87 (82%), Positives = 80/87 (91%)
 Frame = +3

Query: 69  GYAVIDGGLATELERHGANLNDPLWSATCLIHSPQLIRRVHLDYLEAGADIIITASYQAT 248
           GYAVIDGG ATELERHGA+LNDPLWSA CLI SP L+RRVHLDY++AGA+II+TASYQAT
Sbjct: 22  GYAVIDGGFATELERHGADLNDPLWSAKCLISSPHLVRRVHLDYIDAGANIILTASYQAT 81

Query: 249 IQGFEAKGLSTQESETLLNRSVEIALE 329
           IQGFEAKGLST+E+E LL RSVEIA E
Sbjct: 82  IQGFEAKGLSTEEAEQLLRRSVEIACE 108


Top