BLASTX nr result

ID: Coptis24_contig00012306 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012306
         (894 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003517810.1| PREDICTED: uncharacterized protein LOC100789...   341   2e-91
ref|XP_003518745.1| PREDICTED: uncharacterized protein LOC100789...   335   6e-90
ref|XP_004153894.1| PREDICTED: uncharacterized protein LOC101211...   335   1e-89
ref|XP_002522483.1| conserved hypothetical protein [Ricinus comm...   334   2e-89
ref|XP_002315031.1| predicted protein [Populus trichocarpa] gi|2...   333   2e-89

>ref|XP_003517810.1| PREDICTED: uncharacterized protein LOC100789803 [Glycine max]
          Length = 254

 Score =  341 bits (874), Expect = 2e-91
 Identities = 181/277 (65%), Positives = 215/277 (77%), Gaps = 2/277 (0%)
 Frame = -3

Query: 892 LSSVSPTIVLPPNNPHRPFQKHNNLIISNSLTKTKTRQFPIFRQERCIRRWPAADNTSCG 713
           L SVSP++VLPP++P R         +  SL   +TR     R+ R +       + SC 
Sbjct: 4   LPSVSPSMVLPPSHPFRR--------LPPSLVSARTRS----RRRRHV-------SVSCT 44

Query: 712 FSGRSSSGDIEGEESNKEELERALHLDGSIPGSSDEFVKRVSSRAYDMRRNVQQSLDTTS 533
            SG  +           +E+ERALH+DG+IPG+SDEFVKRVSSRAYDMRRN+QQS DT+S
Sbjct: 45  LSGNGTD----------DEVERALHMDGAIPGTSDEFVKRVSSRAYDMRRNLQQSFDTSS 94

Query: 532 YDVLEANPWRESSKPVYVLTQKENQICTMKTRRSRSEVERELGQLFSKGGKRRPEFGNKT 353
           YDVL+ANPWRE+SKPVYVLTQKENQ+CTMKTRR+RSEVERELG LFSKG K     GN++
Sbjct: 95  YDVLDANPWRETSKPVYVLTQKENQLCTMKTRRNRSEVERELGLLFSKGSKWSSGIGNQS 154

Query: 352 KQSRSGT--EFRMLVEDVREGVLVFEDENDAAKFCDLLQGGGKGCEGVAEIEASSVFDIC 179
           KQ R GT  +F+MLVEDVREGVLVFED N+A K+CDLL+GGG+GCEGVAEIEASS+FD+C
Sbjct: 155 KQVRGGTTNKFQMLVEDVREGVLVFEDANEAVKYCDLLEGGGQGCEGVAEIEASSIFDLC 214

Query: 178 QKMRALAVLFRRGGTPPKPESLELNLKAKKRSLEDQD 68
           QKMRALAVLFRRG TPP PESL+LNL+A+KRSLEDQD
Sbjct: 215 QKMRALAVLFRRGRTPPLPESLKLNLRARKRSLEDQD 251


>ref|XP_003518745.1| PREDICTED: uncharacterized protein LOC100789464 [Glycine max]
          Length = 253

 Score =  335 bits (860), Expect = 6e-90
 Identities = 178/276 (64%), Positives = 214/276 (77%), Gaps = 1/276 (0%)
 Frame = -3

Query: 892 LSSVSPTIVLPPNNPHRPFQKHNNLIISNSLTKTKTRQFPIFRQERCIRRWPAADNTSCG 713
           L SVSP++VLPP++P R         +  SL  ++TR     R+ R +       + SC 
Sbjct: 4   LPSVSPSMVLPPSHPFRR--------LPPSLVSSRTRS----RRRRHV-------SVSCT 44

Query: 712 FSGRSSSGDIEGEESNKEELERALHLDGSIPGSSDEFVKRVSSRAYDMRRNVQQSLDTTS 533
            +G          +   +E+ERALH+DG+IP +SDEFVKRVSSRAYDMRRN+QQS DT+S
Sbjct: 45  LAG----------DGTDDEVERALHMDGAIPRTSDEFVKRVSSRAYDMRRNLQQSFDTSS 94

Query: 532 YDVLEANPWRESSKPVYVLTQKENQICTMKTRRSRSEVERELGQLFSKGGKRRPEFGNKT 353
           YDVL+ANPWRE SKPVYVLTQKENQ+CTMKTRR+RSEVERELG LFSKG K     GN++
Sbjct: 95  YDVLDANPWREISKPVYVLTQKENQLCTMKTRRNRSEVERELGLLFSKGSKWSSGIGNQS 154

Query: 352 KQSRSGT-EFRMLVEDVREGVLVFEDENDAAKFCDLLQGGGKGCEGVAEIEASSVFDICQ 176
           KQ+R GT +F+MLVEDVREGVLVFED N+A K+CDLL+GGG+GCEGVAEIEASS+FD+CQ
Sbjct: 155 KQARGGTNKFQMLVEDVREGVLVFEDANEAVKYCDLLEGGGQGCEGVAEIEASSIFDLCQ 214

Query: 175 KMRALAVLFRRGGTPPKPESLELNLKAKKRSLEDQD 68
           KMRALAVLFRRG TPP PESL+LNL+A+ RSLEDQD
Sbjct: 215 KMRALAVLFRRGRTPPLPESLKLNLRARNRSLEDQD 250


>ref|XP_004153894.1| PREDICTED: uncharacterized protein LOC101211866 [Cucumis sativus]
           gi|449518155|ref|XP_004166109.1| PREDICTED:
           uncharacterized LOC101211866 [Cucumis sativus]
          Length = 270

 Score =  335 bits (858), Expect = 1e-89
 Identities = 177/275 (64%), Positives = 214/275 (77%)
 Frame = -3

Query: 892 LSSVSPTIVLPPNNPHRPFQKHNNLIISNSLTKTKTRQFPIFRQERCIRRWPAADNTSCG 713
           LSSVSP+ VLP  NP    ++   +   +        +F    +   +R        SCG
Sbjct: 4   LSSVSPSFVLPSRNPLCSRRRRIAVSFGDLRYPLPRVRFLFGPRSTKLRE------ISCG 57

Query: 712 FSGRSSSGDIEGEESNKEELERALHLDGSIPGSSDEFVKRVSSRAYDMRRNVQQSLDTTS 533
             G   +G  +G+   ++++ERAL LDG+IPG+S+EFVKRVSSRAYDMRR++ Q+ D++S
Sbjct: 58  VGG---AGANQGDSDAEDDMERALSLDGNIPGTSNEFVKRVSSRAYDMRRHLHQTFDSSS 114

Query: 532 YDVLEANPWRESSKPVYVLTQKENQICTMKTRRSRSEVERELGQLFSKGGKRRPEFGNKT 353
           YDVLEANPWRESSKPVYVLT  ENQICTMKTRR+RSEVERELG LFSKGGK RPE  N+ 
Sbjct: 115 YDVLEANPWRESSKPVYVLTHNENQICTMKTRRNRSEVERELGLLFSKGGKWRPE--NQK 172

Query: 352 KQSRSGTEFRMLVEDVREGVLVFEDENDAAKFCDLLQGGGKGCEGVAEIEASSVFDICQK 173
           KQS++G +F+MLVED+REGVLVFEDEN+AA++CDLLQGGGK CEGV EIEASSVFD+C+K
Sbjct: 173 KQSKTGIKFQMLVEDIREGVLVFEDENEAARYCDLLQGGGKDCEGVFEIEASSVFDLCKK 232

Query: 172 MRALAVLFRRGGTPPKPESLELNLKAKKRSLEDQD 68
           MRALAVLFRRG TPP P+SLELNLKA+KRSLEDQD
Sbjct: 233 MRALAVLFRRGRTPPLPQSLELNLKARKRSLEDQD 267


>ref|XP_002522483.1| conserved hypothetical protein [Ricinus communis]
           gi|223538368|gb|EEF39975.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 272

 Score =  334 bits (856), Expect = 2e-89
 Identities = 183/280 (65%), Positives = 220/280 (78%), Gaps = 5/280 (1%)
 Frame = -3

Query: 892 LSSVSPTIVLPPNNPHRPFQKHNNLIISNSLTKTKTRQFPIFRQERCIRRWPAADNTSCG 713
           L+SV P ++LPP+NP      H  L   +S       ++P+ R     RRW    N SC 
Sbjct: 4   LASVPP-MILPPSNPLH--LHHRRLFFPSS--SFFPHKYPL-RSSFSRRRWR---NVSCK 54

Query: 712 FSG----RSSSGDIEGEESNKEELERALHLDGSIPGSSDEFVKRVSSRAYDMRRNVQQSL 545
            S     R+  GD  G+E  +EE+ERALHLDG+IPG+SDEFVK+VSSRAYDMRR++QQS 
Sbjct: 55  LSNYNEPRNDGGDDAGDE--REEIERALHLDGTIPGTSDEFVKQVSSRAYDMRRHLQQSF 112

Query: 544 DTTSYDVLEANPWRESSKPVYVLTQKENQICTMKTRRSRSEVERELGQLFSKGGKRRPEF 365
           D++SYDVLE NPWRE SKPVYVLT +ENQ+CTM+TRR+RSEVERELG LFSKGGK R   
Sbjct: 113 DSSSYDVLETNPWREPSKPVYVLTHRENQLCTMRTRRNRSEVERELGILFSKGGKWR--- 169

Query: 364 GNKTKQSRSGT-EFRMLVEDVREGVLVFEDENDAAKFCDLLQGGGKGCEGVAEIEASSVF 188
            N++KQSR  T +F+MLVED+REGVLVFEDEN+A K+C+LLQGGGKGCEGVAEIEASSVF
Sbjct: 170 ANQSKQSRPETNKFQMLVEDIREGVLVFEDENEAVKYCNLLQGGGKGCEGVAEIEASSVF 229

Query: 187 DICQKMRALAVLFRRGGTPPKPESLELNLKAKKRSLEDQD 68
           D+C+KMRALAVLFRRG TPP P+SLELNL+A+KRSLEDQ+
Sbjct: 230 DLCRKMRALAVLFRRGRTPPLPQSLELNLRARKRSLEDQE 269


>ref|XP_002315031.1| predicted protein [Populus trichocarpa] gi|222864071|gb|EEF01202.1|
           predicted protein [Populus trichocarpa]
          Length = 196

 Score =  333 bits (855), Expect = 2e-89
 Identities = 161/196 (82%), Positives = 187/196 (95%)
 Frame = -3

Query: 661 EELERALHLDGSIPGSSDEFVKRVSSRAYDMRRNVQQSLDTTSYDVLEANPWRESSKPVY 482
           EE+ERALHLDG+IPG+S+EFVK+VSSRAYDMRR++QQS D++SYDVL+ANPWRE+SKPVY
Sbjct: 1   EEVERALHLDGTIPGTSNEFVKQVSSRAYDMRRHLQQSFDSSSYDVLDANPWRETSKPVY 60

Query: 481 VLTQKENQICTMKTRRSRSEVERELGQLFSKGGKRRPEFGNKTKQSRSGTEFRMLVEDVR 302
           VLTQ+ENQ+CTMKTRR+RSEVE+ELG LFSKGGK R E G++TKQSR GT+F+MLVEDVR
Sbjct: 61  VLTQRENQLCTMKTRRNRSEVEKELGLLFSKGGKWRSEIGSQTKQSRRGTKFQMLVEDVR 120

Query: 301 EGVLVFEDENDAAKFCDLLQGGGKGCEGVAEIEASSVFDICQKMRALAVLFRRGGTPPKP 122
           EGVLVFEDEN+A ++CDLLQGGGKGCEGVAEIEASSVFD+CQKMRALAVLFRRG TPP P
Sbjct: 121 EGVLVFEDENEAVRYCDLLQGGGKGCEGVAEIEASSVFDLCQKMRALAVLFRRGRTPPLP 180

Query: 121 ESLELNLKAKKRSLED 74
           +SLELNL+A+KRSLED
Sbjct: 181 QSLELNLRARKRSLED 196


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