BLASTX nr result

ID: Coptis24_contig00012298 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012298
         (414 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281741.1| PREDICTED: BTB/POZ domain-containing protein...   184   5e-45
ref|XP_002531830.1| protein binding protein, putative [Ricinus c...   167   8e-40
ref|XP_002298385.1| predicted protein [Populus trichocarpa] gi|2...   161   4e-38
ref|XP_003538032.1| PREDICTED: BTB/POZ domain-containing protein...   158   4e-37
ref|XP_003540755.1| PREDICTED: BTB/POZ domain-containing protein...   157   8e-37

>ref|XP_002281741.1| PREDICTED: BTB/POZ domain-containing protein At5g60050 [Vitis
           vinifera] gi|297746172|emb|CBI16228.3| unnamed protein
           product [Vitis vinifera]
          Length = 499

 Score =  184 bits (468), Expect = 5e-45
 Identities = 97/137 (70%), Positives = 110/137 (80%)
 Frame = -2

Query: 413 KRLVKEDVGKVLGLLKVFSAIKFDMGIISCLDYLEAVPWSEDEEEKVVSVLGQLQLHGPA 234
           KRL+ E+V KVLGLLKV +AI FD GIISCL++LEAVPWSEDEEEKVVS LGQLQLH   
Sbjct: 167 KRLMGEEVSKVLGLLKVSAAIMFDAGIISCLEFLEAVPWSEDEEEKVVSHLGQLQLHDSV 226

Query: 233 VEVLQRVSAEPSTSANGDDIFMRLLSGVLEAKDDKARREMKALISGLLREDATKNKNHID 54
            EVLQRVSAEPSTS   DDIF+RLL+G+L+AKDDKARREMK LIS LLR++A  N    D
Sbjct: 227 AEVLQRVSAEPSTSTRPDDIFLRLLTGILQAKDDKARREMKTLISRLLRDEAPDNS---D 283

Query: 53  SVDVSSEILYQLCDKCL 3
             DVS + LY LC +CL
Sbjct: 284 RHDVSKDTLYHLCHRCL 300


>ref|XP_002531830.1| protein binding protein, putative [Ricinus communis]
           gi|223528526|gb|EEF30550.1| protein binding protein,
           putative [Ricinus communis]
          Length = 526

 Score =  167 bits (423), Expect = 8e-40
 Identities = 86/137 (62%), Positives = 107/137 (78%)
 Frame = -2

Query: 413 KRLVKEDVGKVLGLLKVFSAIKFDMGIISCLDYLEAVPWSEDEEEKVVSVLGQLQLHGPA 234
           KRL+ E+V KVL +LKV +AI FD GI+SCL+YLEAVPWSEDEEE ++S L QLQLH  A
Sbjct: 194 KRLMGEEVTKVLAVLKVCAAITFDAGIMSCLEYLEAVPWSEDEEENIISHLSQLQLHDSA 253

Query: 233 VEVLQRVSAEPSTSANGDDIFMRLLSGVLEAKDDKARREMKALISGLLREDATKNKNHID 54
            EVLQRVS E STS   DDIF++LL+GVL+AKDDKARREM+ +IS L +ED++   NH +
Sbjct: 254 NEVLQRVSCELSTSYRSDDIFLKLLNGVLQAKDDKARREMRTVISRLFKEDSS---NHDN 310

Query: 53  SVDVSSEILYQLCDKCL 3
            +D+S + LY LC  CL
Sbjct: 311 RLDISKDTLYSLCHGCL 327


>ref|XP_002298385.1| predicted protein [Populus trichocarpa] gi|222845643|gb|EEE83190.1|
           predicted protein [Populus trichocarpa]
          Length = 417

 Score =  161 bits (408), Expect = 4e-38
 Identities = 84/137 (61%), Positives = 105/137 (76%)
 Frame = -2

Query: 413 KRLVKEDVGKVLGLLKVFSAIKFDMGIISCLDYLEAVPWSEDEEEKVVSVLGQLQLHGPA 234
           +RL+ EDV +VL  LKV + I F+ GI SCL+ LEA+PWSEDEEEKVV+ L QLQL   A
Sbjct: 85  RRLMDEDVSRVLAFLKVSADIMFETGIESCLECLEAIPWSEDEEEKVVTQLSQLQLCDLA 144

Query: 233 VEVLQRVSAEPSTSANGDDIFMRLLSGVLEAKDDKARREMKALISGLLREDATKNKNHID 54
            EVLQRVS+EPSTS   DDIF+RLLSGV++AKDDKARREM+ LIS   RE+++   +H +
Sbjct: 145 AEVLQRVSSEPSTSTRADDIFLRLLSGVMQAKDDKARREMRTLISRFFRENSS---DHSN 201

Query: 53  SVDVSSEILYQLCDKCL 3
            +DVS + LY LC +CL
Sbjct: 202 RLDVSKDSLYSLCHRCL 218


>ref|XP_003538032.1| PREDICTED: BTB/POZ domain-containing protein At5g60050-like
           [Glycine max]
          Length = 494

 Score =  158 bits (400), Expect = 4e-37
 Identities = 78/136 (57%), Positives = 105/136 (77%)
 Frame = -2

Query: 410 RLVKEDVGKVLGLLKVFSAIKFDMGIISCLDYLEAVPWSEDEEEKVVSVLGQLQLHGPAV 231
           R + E V K+L LLKV SAI FD+G++SCL+YLE++PW+EDE+E+V+S L  LQ+   A 
Sbjct: 164 RSMAEGVPKILSLLKVSSAIMFDLGVVSCLEYLESIPWTEDEQEEVISQLEHLQIDDSAT 223

Query: 230 EVLQRVSAEPSTSANGDDIFMRLLSGVLEAKDDKARREMKALISGLLREDATKNKNHIDS 51
           EVL RVS++PST+   DDIF+ LLSGVL+AKDDKARREMKAL+S LL+E+ + + + +  
Sbjct: 224 EVLLRVSSDPSTADRADDIFLNLLSGVLQAKDDKARREMKALLSRLLKENVSNDSSRL-- 281

Query: 50  VDVSSEILYQLCDKCL 3
            DVS + LY LC KC+
Sbjct: 282 -DVSKDTLYHLCHKCI 296


>ref|XP_003540755.1| PREDICTED: BTB/POZ domain-containing protein At5g60050-like
           [Glycine max]
          Length = 503

 Score =  157 bits (397), Expect = 8e-37
 Identities = 77/136 (56%), Positives = 105/136 (77%)
 Frame = -2

Query: 410 RLVKEDVGKVLGLLKVFSAIKFDMGIISCLDYLEAVPWSEDEEEKVVSVLGQLQLHGPAV 231
           R + E V K+L LLKV +AI FD+G++SCL+YLE++PW+EDE+E+V+S L  LQ+   A 
Sbjct: 173 RSMAEGVPKILSLLKVSAAIMFDLGVVSCLEYLESIPWTEDEQEEVISQLEHLQIDDSAT 232

Query: 230 EVLQRVSAEPSTSANGDDIFMRLLSGVLEAKDDKARREMKALISGLLREDATKNKNHIDS 51
           EVL RVS++PST+   DDIF+ LLSGVL+AKDDKARREMKAL+S LL+E+ + + + +  
Sbjct: 233 EVLLRVSSDPSTADRADDIFLNLLSGVLQAKDDKARREMKALLSRLLKENVSNDSSRL-- 290

Query: 50  VDVSSEILYQLCDKCL 3
            DVS + LY LC KC+
Sbjct: 291 -DVSKDTLYHLCHKCI 305


Top