BLASTX nr result

ID: Coptis24_contig00012284 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012284
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001151658.1| 1-aminocyclopropane-1-carboxylate oxidase [Z...    97   1e-18
tpg|DAA53133.1| TPA: 1-aminocyclopropane-1-carboxylate oxidase [...    97   1e-18
ref|XP_002455048.1| hypothetical protein SORBIDRAFT_03g003550 [S...    97   1e-18
gb|ACG28565.1| 1-aminocyclopropane-1-carboxylate oxidase [Zea mays]    97   1e-18
ref|XP_003632647.1| PREDICTED: 1-aminocyclopropane-1-carboxylate...    97   2e-18

>ref|NP_001151658.1| 1-aminocyclopropane-1-carboxylate oxidase [Zea mays]
           gi|195648464|gb|ACG43700.1|
           1-aminocyclopropane-1-carboxylate oxidase [Zea mays]
          Length = 376

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 50/92 (54%), Positives = 63/92 (68%)
 Frame = -1

Query: 288 NVGDLLQMLSNDQYKSGEHRVLANSFREPRTSIAVFVGVEVKDTNTASYGPLQELLSPAK 109
           NVGDLLQ++SND+Y S EHRV+ N+  EPR SI +F     K  ++  YGPL EL+S   
Sbjct: 284 NVGDLLQIMSNDEYTSVEHRVVMNTREEPRVSIGIFFSPG-KRGDSVFYGPLPELVSSEN 342

Query: 108 PPLYRNFTMSELVQKFYSRALGNMSILDEFKL 13
           PP YRNFTMSE    F+SR L + ++LD FKL
Sbjct: 343 PPKYRNFTMSEFYGTFFSRDLASKALLDNFKL 374


>tpg|DAA53133.1| TPA: 1-aminocyclopropane-1-carboxylate oxidase [Zea mays]
          Length = 376

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 50/92 (54%), Positives = 63/92 (68%)
 Frame = -1

Query: 288 NVGDLLQMLSNDQYKSGEHRVLANSFREPRTSIAVFVGVEVKDTNTASYGPLQELLSPAK 109
           NVGDLLQ++SND+Y S EHRV+ N+  EPR SI +F     K  ++  YGPL EL+S   
Sbjct: 284 NVGDLLQIMSNDKYTSVEHRVVMNTREEPRVSIGIFFSPG-KRGDSVFYGPLPELVSSEN 342

Query: 108 PPLYRNFTMSELVQKFYSRALGNMSILDEFKL 13
           PP YRNFTMSE    F+SR L + ++LD FKL
Sbjct: 343 PPKYRNFTMSEFYGTFFSRDLASKALLDNFKL 374


>ref|XP_002455048.1| hypothetical protein SORBIDRAFT_03g003550 [Sorghum bicolor]
           gi|241927023|gb|EES00168.1| hypothetical protein
           SORBIDRAFT_03g003550 [Sorghum bicolor]
          Length = 379

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 50/92 (54%), Positives = 63/92 (68%)
 Frame = -1

Query: 288 NVGDLLQMLSNDQYKSGEHRVLANSFREPRTSIAVFVGVEVKDTNTASYGPLQELLSPAK 109
           NVGDLLQ++SND+Y S EHRV+ N+  EPR SI +F     K  ++  YGPL EL+S   
Sbjct: 287 NVGDLLQIMSNDKYTSVEHRVVMNTREEPRVSIGIFFSPG-KRGDSVFYGPLPELVSSEN 345

Query: 108 PPLYRNFTMSELVQKFYSRALGNMSILDEFKL 13
           PP Y NFTMSE   KF+SR L + ++LD FKL
Sbjct: 346 PPKYSNFTMSEFYGKFFSRDLASKALLDNFKL 377


>gb|ACG28565.1| 1-aminocyclopropane-1-carboxylate oxidase [Zea mays]
          Length = 378

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 50/92 (54%), Positives = 63/92 (68%)
 Frame = -1

Query: 288 NVGDLLQMLSNDQYKSGEHRVLANSFREPRTSIAVFVGVEVKDTNTASYGPLQELLSPAK 109
           NVGDLLQ++SND+Y S EHRV+ N+  EPR SI +F     K  ++  YGPL EL+S   
Sbjct: 286 NVGDLLQIMSNDKYTSVEHRVVMNTREEPRVSIGIFFSPG-KRGDSVFYGPLPELVSSEN 344

Query: 108 PPLYRNFTMSELVQKFYSRALGNMSILDEFKL 13
           PP YRNFTMSE    F+SR L + ++LD FKL
Sbjct: 345 PPKYRNFTMSEFYGTFFSRDLASKALLDNFKL 376


>ref|XP_003632647.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 4-like
           isoform 2 [Vitis vinifera]
          Length = 363

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 50/93 (53%), Positives = 65/93 (69%), Gaps = 1/93 (1%)
 Frame = -1

Query: 288 NVGDLLQMLSNDQYKSGEHRVLANSFREPRTSIAVFVGV-EVKDTNTASYGPLQELLSPA 112
           NVGD LQ++SN +YKS +HRVLANS +EPR SI +F  + + KD+N  SYGPL ELLSP 
Sbjct: 273 NVGDFLQIVSNGEYKSVQHRVLANSCKEPRISIVMFFNLAKWKDSN--SYGPLPELLSPE 330

Query: 111 KPPLYRNFTMSELVQKFYSRALGNMSILDEFKL 13
           KP +Y NFT  E    FYS+ L + S +D+  +
Sbjct: 331 KPAIYSNFTQKEYNDNFYSKGLDSKSFIDKITI 363


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