BLASTX nr result

ID: Coptis24_contig00012283 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012283
         (2114 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282837.2| PREDICTED: GTPase Der-like [Vitis vinifera]       852   0.0  
ref|XP_002513491.1| GTP-binding protein enga, putative [Ricinus ...   848   0.0  
ref|XP_004142117.1| PREDICTED: GTPase Der-like [Cucumis sativus]      848   0.0  
ref|XP_003539473.1| PREDICTED: GTPase Der-like [Glycine max]          842   0.0  
ref|XP_002314070.1| predicted protein [Populus trichocarpa] gi|2...   838   0.0  

>ref|XP_002282837.2| PREDICTED: GTPase Der-like [Vitis vinifera]
          Length = 676

 Score =  852 bits (2202), Expect = 0.0
 Identities = 430/538 (79%), Positives = 485/538 (90%), Gaps = 2/538 (0%)
 Frame = -2

Query: 1990 ARKVAREYSISLSRELAIEDTDDGKETRRK--QRKRTXXXXXSVPDRLLPKVTIVGRPNV 1817
            A+   REYS  LSR+L+IE+ D   E + +  ++K++     ++PD LLP+VTIVGRPNV
Sbjct: 125  AKHAVREYSRFLSRQLSIEE-DGANELKGRGGKQKKSKSTTRNIPDHLLPRVTIVGRPNV 183

Query: 1816 GKSALFNRLVGGNNAIVVDEPGVTRDRLYGRSFWGNHEFMVVDTGGVLTVSKSQANIMED 1637
            GKSALFNRLVGGN AIVVDEPGVTRDRLYGR+FWG++EFMV+DTGGVLT+SKSQ N+ME+
Sbjct: 184  GKSALFNRLVGGNKAIVVDEPGVTRDRLYGRAFWGDYEFMVIDTGGVLTISKSQDNVMEE 243

Query: 1636 LAITTTIGMEGISLASREAAVARMPSMIERQATAAVEEASAIIFLVDGQAGLTAADVEIA 1457
            LAIT TIGM+GI LASREAAVARMP+MIE+QATAA+EE+S IIFLVDGQAGL+AADVEIA
Sbjct: 244  LAITKTIGMDGIPLASREAAVARMPTMIEKQATAAIEESSVIIFLVDGQAGLSAADVEIA 303

Query: 1456 DWLRKNFSDKDIILAVNKCESPRKGIIQASEFWSLGFSPLPISALSGTGTGELLDLVCSH 1277
            DWLRKN+S+K I+LAVNKCESP+KGI+QA EFWSLGF+PLPISA+SGTGTGELLDLVCS 
Sbjct: 304  DWLRKNYSNKCIVLAVNKCESPKKGIMQALEFWSLGFTPLPISAVSGTGTGELLDLVCSG 363

Query: 1276 LKTVEDMGDQTEQENYIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEF 1097
            LK +ED  +   +ENY+PAIAIVGRPNVGKSSILNALVGEDRTIVSP+SGTTRDAIDTEF
Sbjct: 364  LKKIEDPENLDGEENYVPAIAIVGRPNVGKSSILNALVGEDRTIVSPVSGTTRDAIDTEF 423

Query: 1096 TGPDGQKFKLIDTAGIRRRAVVVSSGSTTEALSVNRALRAIRLADVVALVIEALACITEQ 917
            TGPDGQK++LIDTAGIRRRA V SSGSTTEALSVNRA RAIR +DVVALVIEA+ACITEQ
Sbjct: 424  TGPDGQKYRLIDTAGIRRRAAVASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQ 483

Query: 916  DYKIAERIEREGKGCVIVVNKWDTIPNKNLQTASYYEEDVREKLRSLNWAPIVYSTAMVG 737
            DY+IAERIEREGKGC+IVVNKWDTIPNKN QTA+YYE+DVREKLR L WAPIVYSTA+ G
Sbjct: 484  DYRIAERIEREGKGCLIVVNKWDTIPNKNQQTATYYEQDVREKLRVLGWAPIVYSTAIAG 543

Query: 736  HSVEKVIVAASIVEKERSRRLSTAILNQVVREALAFKSPPRTRGGKRGRLYYCTQAAIRP 557
            HSV+K+IVAAS VEKERSRRLST+ILNQVV+EALAFKSPPR RGGKRGR+YYCTQAAIRP
Sbjct: 544  HSVDKIIVAASTVEKERSRRLSTSILNQVVQEALAFKSPPRNRGGKRGRVYYCTQAAIRP 603

Query: 556  PTFVFFVNDPKLFSDTYRRYMEKQLRTDVGFAGTPIRLLWRSRRKTEKEEGRAKVMKT 383
            PTFVFFVND KLF +TYRRYMEKQLR+D GF+GTPIRLLWRSRRK EK   RA   KT
Sbjct: 604  PTFVFFVNDAKLFPETYRRYMEKQLRSDAGFSGTPIRLLWRSRRKIEKNGARAASAKT 661


>ref|XP_002513491.1| GTP-binding protein enga, putative [Ricinus communis]
            gi|223547399|gb|EEF48894.1| GTP-binding protein enga,
            putative [Ricinus communis]
          Length = 624

 Score =  848 bits (2192), Expect = 0.0
 Identities = 433/531 (81%), Positives = 474/531 (89%), Gaps = 1/531 (0%)
 Frame = -2

Query: 1990 ARKVAREYSISLSRELAIEDTDDGKETRRKQRKRTXXXXXSVPDRLLPKVTIVGRPNVGK 1811
            A  V REYS SLSR+L IED  D K+  RKQ KR       +PD LLP+V IVGRPNVGK
Sbjct: 95   AEDVVREYSTSLSRQLRIEDDSDDKKETRKQ-KRQKFTIPDIPDNLLPRVAIVGRPNVGK 153

Query: 1810 SALFNRLVGGNNAIVVDEPGVTRDRLYGRSFWGNHEFMVVDTGGVLTVSKSQANIMEDLA 1631
            SALFNRLVGGN AIVVDEPGVTRDRLYGRSFWG+ EFMVVDTGGVLT+S+SQ N+MEDLA
Sbjct: 154  SALFNRLVGGNKAIVVDEPGVTRDRLYGRSFWGDFEFMVVDTGGVLTISQSQDNVMEDLA 213

Query: 1630 ITTTIGMEGISLASREAAVARMPSMIERQATAAVEEASAIIFLVDGQAGLTAADVEIADW 1451
            ITTTIGM+GI LASREAAVARMPSMIERQA AAVEE+S IIFLVDGQAGL AAD+EIADW
Sbjct: 214  ITTTIGMDGIPLASREAAVARMPSMIERQAAAAVEESSVIIFLVDGQAGLIAADIEIADW 273

Query: 1450 LRKNFSDKDIILAVNKCESPRKGIIQASEFWSLGFSPLPISALSGTGTGELLDLVCSHLK 1271
            LRKN+S+K IILAVNKCESP+KGI+QA+EFWSLG SP+PISALSGTGTGELLDLVCS L 
Sbjct: 274  LRKNYSNKFIILAVNKCESPKKGIMQAAEFWSLGLSPIPISALSGTGTGELLDLVCSQLA 333

Query: 1270 TVEDMGD-QTEQENYIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFT 1094
             VE       E++NY+PAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEF+
Sbjct: 334  KVEVSKHLDNEEQNYVPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFS 393

Query: 1093 GPDGQKFKLIDTAGIRRRAVVVSSGSTTEALSVNRALRAIRLADVVALVIEALACITEQD 914
            GPDGQKF+LIDTAGIRRRA V SSGS TEALSVNRA RAIR +DVVALVIEA+ACITEQD
Sbjct: 394  GPDGQKFRLIDTAGIRRRAAVASSGSLTEALSVNRAFRAIRRSDVVALVIEAMACITEQD 453

Query: 913  YKIAERIEREGKGCVIVVNKWDTIPNKNLQTASYYEEDVREKLRSLNWAPIVYSTAMVGH 734
            ++IA+RIE+EGKGC+IVVNKWDTIPNKN QTA+YYE+DVREKLR L WAPIVYSTA+  H
Sbjct: 454  FRIADRIEKEGKGCLIVVNKWDTIPNKNQQTATYYEQDVREKLRILQWAPIVYSTAIADH 513

Query: 733  SVEKVIVAASIVEKERSRRLSTAILNQVVREALAFKSPPRTRGGKRGRLYYCTQAAIRPP 554
            SVEK+I+AAS VEKERSRRLSTAILNQVVREALAFKSPPRTRGG+RGR+YYCTQAAIRPP
Sbjct: 514  SVEKIIIAASAVEKERSRRLSTAILNQVVREALAFKSPPRTRGGRRGRVYYCTQAAIRPP 573

Query: 553  TFVFFVNDPKLFSDTYRRYMEKQLRTDVGFAGTPIRLLWRSRRKTEKEEGR 401
            TFVFFVND  LF +TYRR+MEKQLR+D GF+GTPIRLLWRSRRK EK  G+
Sbjct: 574  TFVFFVNDASLFPETYRRFMEKQLRSDAGFSGTPIRLLWRSRRKMEKGGGQ 624


>ref|XP_004142117.1| PREDICTED: GTPase Der-like [Cucumis sativus]
          Length = 660

 Score =  848 bits (2190), Expect = 0.0
 Identities = 429/531 (80%), Positives = 477/531 (89%), Gaps = 1/531 (0%)
 Frame = -2

Query: 1990 ARKVAREYSISLSRELAIEDT-DDGKETRRKQRKRTXXXXXSVPDRLLPKVTIVGRPNVG 1814
            A+ V REYS SLSREL I+D   D  ET RK++KR       +PD LLP+V IVGRPNVG
Sbjct: 110  AKDVLREYSSSLSRELIIDDELSDQSETGRKKKKRKTTPRNVIPDHLLPRVAIVGRPNVG 169

Query: 1813 KSALFNRLVGGNNAIVVDEPGVTRDRLYGRSFWGNHEFMVVDTGGVLTVSKSQANIMEDL 1634
            KSA+FNRLVGGN AIVVDEPGVTRDRLYGRSFWG++EFMVVDTGGVL+VSK+Q +++E+L
Sbjct: 170  KSAMFNRLVGGNRAIVVDEPGVTRDRLYGRSFWGDNEFMVVDTGGVLSVSKTQNDVIEEL 229

Query: 1633 AITTTIGMEGISLASREAAVARMPSMIERQATAAVEEASAIIFLVDGQAGLTAADVEIAD 1454
            AI+TTIGM+GI LASREAAVARMPSMIERQATAAVEEAS +IFLVDGQAGLTAAD EIAD
Sbjct: 230  AISTTIGMDGIPLASREAAVARMPSMIERQATAAVEEASVVIFLVDGQAGLTAADEEIAD 289

Query: 1453 WLRKNFSDKDIILAVNKCESPRKGIIQASEFWSLGFSPLPISALSGTGTGELLDLVCSHL 1274
            WLR+N+SDK  ILAVNKCESPRKG++QASEFWSLGF+PLP+SALSGTGTGELLDL+CS L
Sbjct: 290  WLRRNYSDKFTILAVNKCESPRKGMMQASEFWSLGFTPLPVSALSGTGTGELLDLLCSRL 349

Query: 1273 KTVEDMGDQTEQENYIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFT 1094
            + VE   D  E+E+YIPA+AIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFT
Sbjct: 350  QKVESSEDLHEEEDYIPAVAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFT 409

Query: 1093 GPDGQKFKLIDTAGIRRRAVVVSSGSTTEALSVNRALRAIRLADVVALVIEALACITEQD 914
            G DGQKF+LIDTAGIRRRA V SSGS TE+LSVNRA RAIR +DVVALVIEALACITEQD
Sbjct: 410  GQDGQKFRLIDTAGIRRRAAVASSGSMTESLSVNRAFRAIRRSDVVALVIEALACITEQD 469

Query: 913  YKIAERIEREGKGCVIVVNKWDTIPNKNLQTASYYEEDVREKLRSLNWAPIVYSTAMVGH 734
             KIAERIE+EGKGC+IVVNKWDTIPNKN QTA YYE+DVREKLR L+WAPIVYSTA+ GH
Sbjct: 470  CKIAERIEKEGKGCLIVVNKWDTIPNKNQQTAMYYEQDVREKLRCLDWAPIVYSTAIAGH 529

Query: 733  SVEKVIVAASIVEKERSRRLSTAILNQVVREALAFKSPPRTRGGKRGRLYYCTQAAIRPP 554
            SV+K+I AAS VEKERSRRL+T+ILNQVV+EALAFK+PPRTRGGKRGR+YYCTQAAIRPP
Sbjct: 530  SVDKIITAASAVEKERSRRLTTSILNQVVQEALAFKAPPRTRGGKRGRVYYCTQAAIRPP 589

Query: 553  TFVFFVNDPKLFSDTYRRYMEKQLRTDVGFAGTPIRLLWRSRRKTEKEEGR 401
            TF+FFVND KLF +TYRRYMEKQLR + GF GTPIRLLWRSRRK EK E +
Sbjct: 590  TFIFFVNDAKLFPETYRRYMEKQLRANAGFPGTPIRLLWRSRRKMEKGEAK 640


>ref|XP_003539473.1| PREDICTED: GTPase Der-like [Glycine max]
          Length = 632

 Score =  842 bits (2174), Expect = 0.0
 Identities = 431/550 (78%), Positives = 479/550 (87%), Gaps = 5/550 (0%)
 Frame = -2

Query: 1990 ARKVAREYSISLSRELAIEDTD-----DGKETRRKQRKRTXXXXXSVPDRLLPKVTIVGR 1826
            A+     YS SLS+ L+IED +     +  ++RRK  +RT      +PD LLP+V IVGR
Sbjct: 82   AKDAVEAYSSSLSQILSIEDEEKSDRKESAQSRRKSPRRTKI----IPDNLLPRVAIVGR 137

Query: 1825 PNVGKSALFNRLVGGNNAIVVDEPGVTRDRLYGRSFWGNHEFMVVDTGGVLTVSKSQANI 1646
            PNVGKSALFNRLVGGN AIVVDEPGVTRDRLYGRS+WG HEFMVVDTGGV+TVSKSQA +
Sbjct: 138  PNVGKSALFNRLVGGNRAIVVDEPGVTRDRLYGRSYWGEHEFMVVDTGGVITVSKSQATV 197

Query: 1645 MEDLAITTTIGMEGISLASREAAVARMPSMIERQATAAVEEASAIIFLVDGQAGLTAADV 1466
            ME+LAITTTIGM+GI LA REAAVARMPSMIERQATAAVEE+S IIFLVDGQAGLTAAD 
Sbjct: 198  MEELAITTTIGMDGIPLAVREAAVARMPSMIERQATAAVEESSVIIFLVDGQAGLTAADE 257

Query: 1465 EIADWLRKNFSDKDIILAVNKCESPRKGIIQASEFWSLGFSPLPISALSGTGTGELLDLV 1286
            EIADWLRKN+SDK +ILAVNKCESPRK I+QASEFWSLGF PLPISA+SGTGTGELLDLV
Sbjct: 258  EIADWLRKNYSDKYVILAVNKCESPRKRIMQASEFWSLGFEPLPISAISGTGTGELLDLV 317

Query: 1285 CSHLKTVEDMGDQTEQENYIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAID 1106
            CS L+ +E+  +  E E+Y+PAI+IVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAID
Sbjct: 318  CSGLQKIEESNNLVE-EDYVPAISIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAID 376

Query: 1105 TEFTGPDGQKFKLIDTAGIRRRAVVVSSGSTTEALSVNRALRAIRLADVVALVIEALACI 926
            TEFTGPDGQKF+LIDTAGIR+R  + S+GSTTEALSVNRA RAIR +DVVALVIEA+ACI
Sbjct: 377  TEFTGPDGQKFQLIDTAGIRKRTAIASAGSTTEALSVNRAFRAIRRSDVVALVIEAMACI 436

Query: 925  TEQDYKIAERIEREGKGCVIVVNKWDTIPNKNLQTASYYEEDVREKLRSLNWAPIVYSTA 746
            TEQDYKIAERIE+EGKGCVIVVNKWDTIPNKN QTASYYE+DVREKLRSL WAPIVYSTA
Sbjct: 437  TEQDYKIAERIEKEGKGCVIVVNKWDTIPNKNQQTASYYEQDVREKLRSLVWAPIVYSTA 496

Query: 745  MVGHSVEKVIVAASIVEKERSRRLSTAILNQVVREALAFKSPPRTRGGKRGRLYYCTQAA 566
            + GHSV+K+IVAA  VEKERSRRL T+ILNQVV+EA+ FK PPRTRGGKRGR+YYCTQAA
Sbjct: 497  VAGHSVDKIIVAAIEVEKERSRRLGTSILNQVVQEAVGFKPPPRTRGGKRGRVYYCTQAA 556

Query: 565  IRPPTFVFFVNDPKLFSDTYRRYMEKQLRTDVGFAGTPIRLLWRSRRKTEKEEGRAKVMK 386
            IRPPTFVFFVND KLF +TYRRYMEKQLRTD GF+GTPIRLLWRSRRK  K+EG+     
Sbjct: 557  IRPPTFVFFVNDAKLFPETYRRYMEKQLRTDAGFSGTPIRLLWRSRRKMGKDEGKPVTKT 616

Query: 385  TTTPKRSERK 356
                  ++RK
Sbjct: 617  RENLTSNDRK 626


>ref|XP_002314070.1| predicted protein [Populus trichocarpa] gi|222850478|gb|EEE88025.1|
            predicted protein [Populus trichocarpa]
          Length = 489

 Score =  838 bits (2166), Expect = 0.0
 Identities = 422/488 (86%), Positives = 453/488 (92%)
 Frame = -2

Query: 1867 VPDRLLPKVTIVGRPNVGKSALFNRLVGGNNAIVVDEPGVTRDRLYGRSFWGNHEFMVVD 1688
            +PD LLPKV IVGRPNVGKSALFNRLVGGN AIVVDEPGVTRDRLYGRSFWG HEFMVVD
Sbjct: 2    IPDHLLPKVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRLYGRSFWGEHEFMVVD 61

Query: 1687 TGGVLTVSKSQANIMEDLAITTTIGMEGISLASREAAVARMPSMIERQATAAVEEASAII 1508
            TGGV+TVSKSQAN+MEDLAI+TTIGM+GI LASREAAVARMPSMIE+QATAAVEE+S II
Sbjct: 62   TGGVVTVSKSQANVMEDLAISTTIGMDGIPLASREAAVARMPSMIEKQATAAVEESSVII 121

Query: 1507 FLVDGQAGLTAADVEIADWLRKNFSDKDIILAVNKCESPRKGIIQASEFWSLGFSPLPIS 1328
            FLVDGQAGLTAADVEIADWLR+N+S+K IILAVNKCESPRKGI+QASEFWSLGFSPLPIS
Sbjct: 122  FLVDGQAGLTAADVEIADWLRRNYSNKCIILAVNKCESPRKGIMQASEFWSLGFSPLPIS 181

Query: 1327 ALSGTGTGELLDLVCSHLKTVEDMGDQTEQENYIPAIAIVGRPNVGKSSILNALVGEDRT 1148
            A+SGTGTGELLDLVCS L  VE   +  E+E YIPAIAIVGRPNVGKSSILNALVGEDRT
Sbjct: 182  AISGTGTGELLDLVCSRLGKVEVSKNVNEEETYIPAIAIVGRPNVGKSSILNALVGEDRT 241

Query: 1147 IVSPISGTTRDAIDTEFTGPDGQKFKLIDTAGIRRRAVVVSSGSTTEALSVNRALRAIRL 968
            IVSPISGTTRDAIDTEF GPDGQKF LIDTAGIRRRA V SSGS TEALSVNRA R IR 
Sbjct: 242  IVSPISGTTRDAIDTEFVGPDGQKFLLIDTAGIRRRAAVASSGSVTEALSVNRAFRGIRR 301

Query: 967  ADVVALVIEALACITEQDYKIAERIEREGKGCVIVVNKWDTIPNKNLQTASYYEEDVREK 788
            +DVVALVIEA+ACITEQDY+IAERIE+EGKGC+IVVNKWDTIPNKN QTA+YYE+DVREK
Sbjct: 302  SDVVALVIEAMACITEQDYRIAERIEKEGKGCLIVVNKWDTIPNKNQQTATYYEQDVREK 361

Query: 787  LRSLNWAPIVYSTAMVGHSVEKVIVAASIVEKERSRRLSTAILNQVVREALAFKSPPRTR 608
            LR L+WAPIVYSTA+ GH+VEK+IVAAS VEKERSRRL T+ILNQVVREALAFK PPRTR
Sbjct: 362  LRLLHWAPIVYSTAIAGHNVEKIIVAASTVEKERSRRLGTSILNQVVREALAFKPPPRTR 421

Query: 607  GGKRGRLYYCTQAAIRPPTFVFFVNDPKLFSDTYRRYMEKQLRTDVGFAGTPIRLLWRSR 428
            GGKRGR+YYCTQAAIRPPTFVFFVND  LF +TYRRYMEKQLR+D GF+GTPIRLLWRSR
Sbjct: 422  GGKRGRVYYCTQAAIRPPTFVFFVNDSNLFPETYRRYMEKQLRSDAGFSGTPIRLLWRSR 481

Query: 427  RKTEKEEG 404
            RK EK+EG
Sbjct: 482  RKMEKDEG 489


Top