BLASTX nr result

ID: Coptis24_contig00012281 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012281
         (615 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83822.1| hypothetical protein VITISV_030954 [Vitis vinifera]   168   6e-40
ref|XP_002274540.2| PREDICTED: probable LRR receptor-like serine...   159   4e-37
ref|XP_003623235.1| Receptor kinase-like protein [Medicago trunc...   156   3e-36
ref|XP_002309132.1| predicted protein [Populus trichocarpa] gi|2...   153   2e-35
ref|XP_002311065.1| predicted protein [Populus trichocarpa] gi|2...   153   3e-35

>emb|CAN83822.1| hypothetical protein VITISV_030954 [Vitis vinifera]
          Length = 1904

 Score =  168 bits (426), Expect = 6e-40
 Identities = 83/153 (54%), Positives = 111/153 (72%), Gaps = 5/153 (3%)
 Frame = -1

Query: 453 LPFALGLYLSIYIHIVLLYCSG-----SSAAFFGNETDKLALLAFKDGITRDPLRVMSSW 289
           +PF   ++ SI +   +++        SS   +GNETD+LALLA K  IT+DPL + +SW
Sbjct: 34  IPFRSFIFHSILVPYTIIFLHSPSPTTSSTILYGNETDRLALLAIKAQITQDPLGITTSW 93

Query: 288 NDSLHFCGWTGVTCSLFDQRVVVLSLVNQELVGSLSPSLGNLSFLTGINLRNNGFNGRIP 109
           NDS+HFC WTGVTC    QRV  L+L +  LVGSLSPS+GNL+FLTG+NL  N F+G+IP
Sbjct: 94  NDSVHFCNWTGVTCGHRHQRVNTLNLSSLHLVGSLSPSIGNLTFLTGLNLELNNFHGQIP 153

Query: 108 EEVGRLTRLQYLNLTHNSFQGAIPVNLTQCLDL 10
           +E+GRL+RL+ LNLT+NSF G IP NL++C +L
Sbjct: 154 QELGRLSRLRALNLTNNSFSGEIPANLSRCSNL 186



 Score =  122 bits (307), Expect = 4e-26
 Identities = 63/110 (57%), Positives = 76/110 (69%)
 Frame = -1

Query: 330  DGITRDPLRVMSSWNDSLHFCGWTGVTCSLFDQRVVVLSLVNQELVGSLSPSLGNLSFLT 151
            +GIT  PLR MSSWNDSLHFC W GV+CS   QRV VL+L +  LVGS+ P +GNLSFL 
Sbjct: 1062 NGITDAPLRAMSSWNDSLHFCQWQGVSCSGRHQRVTVLNLHSLGLVGSIPPLIGNLSFLR 1121

Query: 150  GINLRNNGFNGRIPEEVGRLTRLQYLNLTHNSFQGAIPVNLTQCLDLRFL 1
             INL NN F G +P  V    R+Q LNLT+N  +G IP NL+ C ++R L
Sbjct: 1122 TINLSNNSFQGEVPPVV----RMQILNLTNNWLEGQIPANLSXCSNMRIL 1167


>ref|XP_002274540.2| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At3g47570-like [Vitis vinifera]
          Length = 1040

 Score =  159 bits (402), Expect = 4e-37
 Identities = 76/119 (63%), Positives = 96/119 (80%)
 Frame = -1

Query: 366 NETDKLALLAFKDGITRDPLRVMSSWNDSLHFCGWTGVTCSLFDQRVVVLSLVNQELVGS 187
           NETD+LALLA K  IT+DPL + +SWNDS+HFC WTGVTC    QRV  L+L +  LVGS
Sbjct: 37  NETDRLALLAIKAQITQDPLGITTSWNDSVHFCNWTGVTCGHRHQRVNTLNLNSLHLVGS 96

Query: 186 LSPSLGNLSFLTGINLRNNGFNGRIPEEVGRLTRLQYLNLTHNSFQGAIPVNLTQCLDL 10
           LSPS+GNL+FLTG+NL  N F+G+IP+E+GRL+RL+ LNLT+NSF G IP NL++C +L
Sbjct: 97  LSPSIGNLTFLTGLNLELNNFHGQIPQELGRLSRLRALNLTNNSFSGEIPANLSRCSNL 155


>ref|XP_003623235.1| Receptor kinase-like protein [Medicago truncatula]
           gi|355498250|gb|AES79453.1| Receptor kinase-like protein
           [Medicago truncatula]
          Length = 1003

 Score =  156 bits (394), Expect = 3e-36
 Identities = 74/166 (44%), Positives = 111/166 (66%)
 Frame = -1

Query: 498 MDQVCFVVHTTLMDRLPFALGLYLSIYIHIVLLYCSGSSAAFFGNETDKLALLAFKDGIT 319
           M   C ++   +  +  ++  LY+S Y +      S +++   GNETD  ALL FK  IT
Sbjct: 2   MRNSCVIISKKIFFQFLYSFLLYISKYQY------SSTASTLQGNETDLHALLDFKSRIT 55

Query: 318 RDPLRVMSSWNDSLHFCGWTGVTCSLFDQRVVVLSLVNQELVGSLSPSLGNLSFLTGINL 139
           +DP + +S WNDS+H C W G+TC++ + RV+ L L +  L G+LSPS+GNL++LT +NL
Sbjct: 56  QDPFQALSLWNDSIHHCNWLGITCNISNGRVMHLILADMTLAGTLSPSIGNLTYLTKLNL 115

Query: 138 RNNGFNGRIPEEVGRLTRLQYLNLTHNSFQGAIPVNLTQCLDLRFL 1
           RNN F+G  P++VG L  LQ+LN+++NSF G+IP NL+QC++L  L
Sbjct: 116 RNNSFHGEFPQQVGNLLYLQHLNISYNSFSGSIPSNLSQCIELSIL 161


>ref|XP_002309132.1| predicted protein [Populus trichocarpa] gi|222855108|gb|EEE92655.1|
           predicted protein [Populus trichocarpa]
          Length = 1034

 Score =  153 bits (387), Expect = 2e-35
 Identities = 76/153 (49%), Positives = 100/153 (65%), Gaps = 11/153 (7%)
 Frame = -1

Query: 426 SIYIHIVLLYC-----------SGSSAAFFGNETDKLALLAFKDGITRDPLRVMSSWNDS 280
           S+++ ++L  C           + ++    GNETD LALLA K  I  DPL +MSSWNDS
Sbjct: 4   SLFLKVILQSCFVVIFLHAPSFTQAATTLSGNETDHLALLAIKAQIKLDPLGLMSSWNDS 63

Query: 279 LHFCGWTGVTCSLFDQRVVVLSLVNQELVGSLSPSLGNLSFLTGINLRNNGFNGRIPEEV 100
           LHFC W G+ C    QRV+ L+L +  LVGSLSP +GN+SFL GI+L  N F+G IP+E+
Sbjct: 64  LHFCNWGGIICGNLHQRVITLNLSHYGLVGSLSPQIGNMSFLRGISLEQNYFHGEIPQEI 123

Query: 99  GRLTRLQYLNLTHNSFQGAIPVNLTQCLDLRFL 1
           GRL RL+Y+N ++NSF G IP NL+ C  L  L
Sbjct: 124 GRLDRLKYINFSNNSFSGEIPANLSGCSSLLML 156


>ref|XP_002311065.1| predicted protein [Populus trichocarpa] gi|222850885|gb|EEE88432.1|
           predicted protein [Populus trichocarpa]
          Length = 1032

 Score =  153 bits (386), Expect = 3e-35
 Identities = 78/135 (57%), Positives = 99/135 (73%)
 Frame = -1

Query: 405 LLYCSGSSAAFFGNETDKLALLAFKDGITRDPLRVMSSWNDSLHFCGWTGVTCSLFDQRV 226
           +++ S SS+   GNETD+L+LLAFKD I  DPL  +SSWNDS HFC W+GVTC    QRV
Sbjct: 18  VIHLSLSSSLPIGNETDRLSLLAFKDQIEADPLGTLSSWNDSSHFCEWSGVTCGRRHQRV 77

Query: 225 VVLSLVNQELVGSLSPSLGNLSFLTGINLRNNGFNGRIPEEVGRLTRLQYLNLTHNSFQG 46
           V L L + +LVGSLSP +GNLSFL  +NL NN F+  IP+E+GRL RLQ L L +N+F G
Sbjct: 78  VELDLNSCKLVGSLSPHIGNLSFLRILNLNNNSFSHTIPQEIGRLFRLQKLLLRNNTFTG 137

Query: 45  AIPVNLTQCLDLRFL 1
            IPVN+++C +L  L
Sbjct: 138 EIPVNISRCSNLLHL 152


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