BLASTX nr result
ID: Coptis24_contig00012261
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00012261
(1835 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002285583.1| PREDICTED: glutamyl-tRNA reductase 1, chloro... 649 0.0
ref|XP_002509995.1| Glutamyl-tRNA reductase 1, chloroplast precu... 626 e-177
ref|XP_002301105.1| predicted protein [Populus trichocarpa] gi|2... 620 e-175
ref|XP_004148403.1| PREDICTED: glutamyl-tRNA reductase 1, chloro... 619 e-175
ref|XP_003522737.1| PREDICTED: glutamyl-tRNA reductase 1, chloro... 617 e-174
>ref|XP_002285583.1| PREDICTED: glutamyl-tRNA reductase 1, chloroplastic [Vitis vinifera]
gi|147816412|emb|CAN77439.1| hypothetical protein
VITISV_007402 [Vitis vinifera]
Length = 545
Score = 649 bits (1673), Expect = 0.0
Identities = 346/525 (65%), Positives = 414/525 (78%), Gaps = 10/525 (1%)
Frame = -2
Query: 1720 TSSISYSQYRIICKPITFKRRFVIGRDRSGVPLNPRCGGMPEE--DSDS-RGSSMSALER 1550
+SS S SQYRI CKP +R + + G LN RC + D+DS R SS+SALE+
Sbjct: 26 SSSRSSSQYRIFCKPARTRRSLI----QRGASLNSRCEVASDALVDTDSTRSSSVSALEQ 81
Query: 1549 LKISGADRYTKEKSSIIVLGLSIHTAPVETREKLAIPEAEYPQAIRELCGFYHIEEAAVL 1370
LK S ADRYTKE+SSI+V+GLSIHT PVE REKLAIPEAE+P+AI ELC HIEEAAVL
Sbjct: 82 LKTSAADRYTKERSSIVVIGLSIHTTPVEMREKLAIPEAEWPRAIGELCNLNHIEEAAVL 141
Query: 1369 STCNRVEIYVVALSWHCGVRDVTEWMEKTSGVAASELRPHLFLLRGSDAINHLFEVSAGL 1190
STCNR+EIYVVALS H GV++VTEWM KTSGV SEL H FLL DA HLFEVSAGL
Sbjct: 142 STCNRMEIYVVALSQHRGVKEVTEWMSKTSGVPVSELCHHRFLLYNKDATQHLFEVSAGL 201
Query: 1189 DSLILGDEQILGRVKQVVNFGEGVTGFGRSLNGLFRYALRVGADVLTKTNIASGPIISVS 1010
DSL+LG+ QIL +VKQVV G+GV GFGR+++GLF++A+ VG V T+TNIA+G +SVS
Sbjct: 202 DSLVLGEGQILAQVKQVVKVGQGVVGFGRNISGLFKHAITVGKRVRTETNIAAG-AVSVS 260
Query: 1009 SAAVELAIIKLPQNLSSTARVLVIGAGKMGRLVINHLVAKGWTKIVVVNRSEHRVDAIRE 830
SAAVELA++KLP++ +TAR+LVIGAGKMG+LVI HLVAKG TK+V+VNR E RV AIRE
Sbjct: 261 SAAVELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVIVNRGEERVAAIRE 320
Query: 829 DLSGVEIIYKPLTEMLTCAGESDVVFTSTASNIPLFMKDNVETLPPVGTMNGGSRLFFDI 650
++ VEIIY+PLTEML CA E+DVVFTSTAS PLF+K++V+ LP VG GG RLF DI
Sbjct: 321 EMKDVEIIYRPLTEMLACAAEADVVFTSTASETPLFLKEHVKDLPAVGQDVGGLRLFVDI 380
Query: 649 SVPRNVGSCVSDVENTQVYNVDDFKEVLAPKME-------EAQAIVAKNLDDFQDKMDSF 491
SVPRNVG+CVSD+E +VYNVDD KEV+A E EAQAI+ + F+ DS
Sbjct: 381 SVPRNVGACVSDLETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFEAWRDSL 440
Query: 490 ETVPTIKNLRALVETIRITELERCLSKIKHDIPKKTRRAIEDLSRGMMNKVLHGPMEHLR 311
ETVPTIK LRA E IR+ ELE+CLSK+ DI KKTRRA++DLSRG++NK+LHGPM+HLR
Sbjct: 441 ETVPTIKKLRAYAERIRVAELEKCLSKMGDDISKKTRRAVDDLSRGIVNKLLHGPMQHLR 500
Query: 310 CDESNSRPLSEILENMHALNRMFSLETDASILEQKIRAKMEQSRK 176
CD S+SR LSE LENMHALNRMFSLET+ S+LEQKIRAK+EQ++K
Sbjct: 501 CDGSDSRTLSETLENMHALNRMFSLETEISLLEQKIRAKVEQTQK 545
>ref|XP_002509995.1| Glutamyl-tRNA reductase 1, chloroplast precursor, putative [Ricinus
communis] gi|223550696|gb|EEF52182.1| Glutamyl-tRNA
reductase 1, chloroplast precursor, putative [Ricinus
communis]
Length = 565
Score = 626 bits (1615), Expect = e-177
Identities = 343/570 (60%), Positives = 424/570 (74%), Gaps = 43/570 (7%)
Frame = -2
Query: 1765 MATSTGFPTSMAA-------LNTSS--------------ISYSQYRIICKPI------TF 1667
MA S+GF T+++ LN+S+ +S + R+ CKP
Sbjct: 1 MAVSSGFATTLSGAKMEALLLNSSASSSSSGCSSFRTHLVSVPKIRVFCKPSRNNTNDNG 60
Query: 1666 KRRFVIGRDRSGVPLNPRCGGMPEEDS---------DSRGSSMSALERLKISGADRYTKE 1514
K R V+ + R+GV RC + DS ++ SS+SALE+LK S ADRYTKE
Sbjct: 61 KYRRVLAQ-RAGV----RCEVVASTDSAVETDSNIDPAKVSSLSALEQLKTSAADRYTKE 115
Query: 1513 KSSIIVLGLSIHTAPVETREKLAIPEAEYPQAIRELCGFYHIEEAAVLSTCNRVEIYVVA 1334
++SI+V+GLS+HTAPVE REKLAIPEAE+P+AI ELC HI+EAAVLSTCNR+EIYVVA
Sbjct: 116 RASIVVIGLSVHTAPVEMREKLAIPEAEWPRAIGELCSLNHIDEAAVLSTCNRMEIYVVA 175
Query: 1333 LSWHCGVRDVTEWMEKTSGVAASELRPHLFLLRGSDAINHLFEVSAGLDSLILGDEQILG 1154
LS H GV++VTEWM KTSG+ SE+ H FLL +DA HLFEVSAGLDSL+LG+ QIL
Sbjct: 176 LSQHRGVKEVTEWMSKTSGIPVSEICEHQFLLYNNDATQHLFEVSAGLDSLVLGEGQILA 235
Query: 1153 RVKQVVNFGEGVTGFGRSLNGLFRYALRVGADVLTKTNIASGPIISVSSAAVELAIIKLP 974
+VKQVV G+GV GFGR+++GLF++A+ VG V T+TNIA+G +SVSSAAVELA++KLP
Sbjct: 236 QVKQVVKVGQGVVGFGRNISGLFKHAISVGKRVRTETNIAAG-AVSVSSAAVELALMKLP 294
Query: 973 QNLSSTARVLVIGAGKMGRLVINHLVAKGWTKIVVVNRSEHRVDAIREDLSGVEIIYKPL 794
++ +TAR+LVIGAGKMG+LVI HLVAKG TK+VVVNRSE RV AIRE++ VEIIYKPL
Sbjct: 295 ESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREEIKDVEIIYKPL 354
Query: 793 TEMLTCAGESDVVFTSTASNIPLFMKDNVETLPPVGTMNGGSRLFFDISVPRNVGSCVSD 614
EMLTCA E+DVVFTSTAS PLF+K+NV+ LP V + G RLF DISVPRNVGSCV+D
Sbjct: 355 DEMLTCAAEADVVFTSTASETPLFLKENVKDLPSVSSEVGSLRLFVDISVPRNVGSCVND 414
Query: 613 VENTQVYNVDDFKEVLAPKME-------EAQAIVAKNLDDFQDKMDSFETVPTIKNLRAL 455
VE +VYNVDD KEV+A E EAQAI+ + F+ DS ETVPTIK LRA
Sbjct: 415 VEKARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFEAWRDSLETVPTIKKLRAY 474
Query: 454 VETIRITELERCLSKIKHDIPKKTRRAIEDLSRGMMNKVLHGPMEHLRCDESNSRPLSEI 275
E IR+ EL++CLSK+ +IPKKTRRA++DLSRG++NK+LHGPM+HLRCD S+SR LSE
Sbjct: 475 AERIRVAELDKCLSKMGEEIPKKTRRAVDDLSRGIVNKLLHGPMQHLRCDGSDSRTLSET 534
Query: 274 LENMHALNRMFSLETDASILEQKIRAKMEQ 185
LENMHALNRMFSLET+ ++LEQK+RAK Q
Sbjct: 535 LENMHALNRMFSLETEVAVLEQKLRAKTSQ 564
>ref|XP_002301105.1| predicted protein [Populus trichocarpa] gi|222842831|gb|EEE80378.1|
predicted protein [Populus trichocarpa]
Length = 468
Score = 620 bits (1600), Expect = e-175
Identities = 322/468 (68%), Positives = 385/468 (82%), Gaps = 7/468 (1%)
Frame = -2
Query: 1567 MSALERLKISGADRYTKEKSSIIVLGLSIHTAPVETREKLAIPEAEYPQAIRELCGFYHI 1388
MSALE+LK S DRYTKE++SI+V+GLSIHTAPVE REKLAIPEAE+P+AI ELCG HI
Sbjct: 1 MSALEQLKTSAVDRYTKERASIVVIGLSIHTAPVEMREKLAIPEAEWPRAIGELCGLNHI 60
Query: 1387 EEAAVLSTCNRVEIYVVALSWHCGVRDVTEWMEKTSGVAASELRPHLFLLRGSDAINHLF 1208
EEAAVLSTCNR+EIYVVALS H GV++VTEWM KTSGV SE+ H FLL +DA HLF
Sbjct: 61 EEAAVLSTCNRMEIYVVALSQHRGVKEVTEWMSKTSGVPVSEICEHRFLLYNNDATQHLF 120
Query: 1207 EVSAGLDSLILGDEQILGRVKQVVNFGEGVTGFGRSLNGLFRYALRVGADVLTKTNIASG 1028
EVSAGLDSL+LG+ QIL +VKQVV G+GV GFGR+++GLF++A+ VG V T+TNIA+G
Sbjct: 121 EVSAGLDSLVLGEGQILAQVKQVVKGGQGVVGFGRNISGLFKHAITVGKRVRTETNIAAG 180
Query: 1027 PIISVSSAAVELAIIKLPQNLSSTARVLVIGAGKMGRLVINHLVAKGWTKIVVVNRSEHR 848
+SVSSAAVELA++KLP++ ++AR+LVIGAGKMG+LVI HLVAKG TK+VVVNR+ R
Sbjct: 181 -AVSVSSAAVELALMKLPESSHASARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRTGDR 239
Query: 847 VDAIREDLSGVEIIYKPLTEMLTCAGESDVVFTSTASNIPLFMKDNVETLPPVGTMNGGS 668
V AIRE+L VEIIYKP +MLTCA E+DVVFTST+S PLF++D+V+ LPPVG+ GGS
Sbjct: 240 VAAIREELKDVEIIYKPFPDMLTCAAEADVVFTSTSSETPLFVRDDVKDLPPVGSEVGGS 299
Query: 667 RLFFDISVPRNVGSCVSDVENTQVYNVDDFKEVLAPKME-------EAQAIVAKNLDDFQ 509
RLF DISVPRNVGSCVSD+EN +VYNVDD KEV+A E EAQAI+ + F+
Sbjct: 300 RLFVDISVPRNVGSCVSDLENVRVYNVDDLKEVVAANKEDRLRKAMEAQAIINEESKQFE 359
Query: 508 DKMDSFETVPTIKNLRALVETIRITELERCLSKIKHDIPKKTRRAIEDLSRGMMNKVLHG 329
DS ETVPTIK LRA E IR+ ELE+CLSK+ DI KKTRRA++DLSRG++NK+LHG
Sbjct: 360 AWRDSLETVPTIKKLRAYAERIRLAELEKCLSKMGDDISKKTRRAVDDLSRGIVNKLLHG 419
Query: 328 PMEHLRCDESNSRPLSEILENMHALNRMFSLETDASILEQKIRAKMEQ 185
PM+HLRCD S+SR LSE LENMHALNRMFSLET+ ++LEQKIRAK Q
Sbjct: 420 PMQHLRCDGSDSRTLSETLENMHALNRMFSLETEVAVLEQKIRAKQSQ 467
>ref|XP_004148403.1| PREDICTED: glutamyl-tRNA reductase 1, chloroplastic-like [Cucumis
sativus] gi|2495155|sp|P93111.1|HEM11_CUCSA RecName:
Full=Glutamyl-tRNA reductase 1, chloroplastic;
Short=GluTR; Flags: Precursor gi|1694926|dbj|BAA08910.1|
glutamyl-tRNA reductase [Cucumis sativus]
Length = 552
Score = 619 bits (1597), Expect = e-175
Identities = 319/481 (66%), Positives = 390/481 (81%), Gaps = 7/481 (1%)
Frame = -2
Query: 1597 EEDSDSRGSSMSALERLKISGADRYTKEKSSIIVLGLSIHTAPVETREKLAIPEAEYPQA 1418
+E + S++SALE+LK S DRYTKE+SSI+V+GLSIHT PVE REKLAIPEAE+P+A
Sbjct: 73 DEIDPPKSSNLSALEQLKTSAVDRYTKERSSIVVIGLSIHTTPVEMREKLAIPEAEWPRA 132
Query: 1417 IRELCGFYHIEEAAVLSTCNRVEIYVVALSWHCGVRDVTEWMEKTSGVAASELRPHLFLL 1238
I ELCG HIEEAAVLSTCNR+EIYVVALS H GV++VTEWM KTSG+ SE+ H FLL
Sbjct: 133 IGELCGLNHIEEAAVLSTCNRMEIYVVALSQHRGVKEVTEWMSKTSGIPVSEICQHRFLL 192
Query: 1237 RGSDAINHLFEVSAGLDSLILGDEQILGRVKQVVNFGEGVTGFGRSLNGLFRYALRVGAD 1058
+DA H+FEVSAGLDSL+LG+ QIL +VKQVV G+GV GFGR+++GLF++A+ VG
Sbjct: 193 YNNDATQHIFEVSAGLDSLVLGEGQILAQVKQVVKVGQGVAGFGRNISGLFKHAITVGKR 252
Query: 1057 VLTKTNIASGPIISVSSAAVELAIIKLPQNLSSTARVLVIGAGKMGRLVINHLVAKGWTK 878
V T+TNIA+G +SVSSAAVELA++KLP+ +TAR+LVIGAGKMG+LVI HLVAKG TK
Sbjct: 253 VRTETNIAAG-AVSVSSAAVELALMKLPEPSHATARMLVIGAGKMGKLVIKHLVAKGCTK 311
Query: 877 IVVVNRSEHRVDAIREDLSGVEIIYKPLTEMLTCAGESDVVFTSTASNIPLFMKDNVETL 698
+VVVNRSE RV AIRE++ VEIIYKPLTEML+C E+DV+FTSTAS LF K+ V+ L
Sbjct: 312 MVVVNRSEERVTAIREEMKDVEIIYKPLTEMLSCTAEADVIFTSTASESLLFTKEQVKDL 371
Query: 697 PPVGTMNGGSRLFFDISVPRNVGSCVSDVENTQVYNVDDFKEVLAPKME-------EAQA 539
PPVG GG RLF DISVPRNVG+C++++E+ +VYNVDD KEV+A E EAQ+
Sbjct: 372 PPVGHDVGGLRLFIDISVPRNVGACINNLEDVRVYNVDDLKEVVAANKEDRLRKAMEAQS 431
Query: 538 IVAKNLDDFQDKMDSFETVPTIKNLRALVETIRITELERCLSKIKHDIPKKTRRAIEDLS 359
I+ + F+ DS ETVPTIK LRA E IR ELE+CLSK+ DIPKKTRRA++DLS
Sbjct: 432 IITEESKQFEAWRDSLETVPTIKKLRAYAERIRTAELEKCLSKMGDDIPKKTRRAVDDLS 491
Query: 358 RGMMNKVLHGPMEHLRCDESNSRPLSEILENMHALNRMFSLETDASILEQKIRAKMEQSR 179
RG++NK+LHGPM+HLRCD S+SR LSE LENMHALNRMFSLET+ ++LEQKIRAK+EQ++
Sbjct: 492 RGIVNKLLHGPMQHLRCDGSDSRTLSETLENMHALNRMFSLETEIAVLEQKIRAKVEQNQ 551
Query: 178 K 176
K
Sbjct: 552 K 552
>ref|XP_003522737.1| PREDICTED: glutamyl-tRNA reductase 1, chloroplastic-like [Glycine
max]
Length = 539
Score = 617 bits (1592), Expect = e-174
Identities = 321/490 (65%), Positives = 390/490 (79%), Gaps = 10/490 (2%)
Frame = -2
Query: 1615 RCGGMPEEDSD---SRGSSMSALERLKISGADRYTKEKSSIIVLGLSIHTAPVETREKLA 1445
RC P + S + +++SALE+LK S ADRYTKE+SSII +GLS+HTAPVE REKLA
Sbjct: 51 RCDAQPSDASSVAPNNATALSALEQLKTSAADRYTKERSSIIAIGLSVHTAPVEMREKLA 110
Query: 1444 IPEAEYPQAIRELCGFYHIEEAAVLSTCNRVEIYVVALSWHCGVRDVTEWMEKTSGVAAS 1265
IPEAE+P+AI ELC HIEEAAVLSTCNR+EIYV+ALS H GV++V EWM KTS V S
Sbjct: 111 IPEAEWPRAIAELCSLNHIEEAAVLSTCNRMEIYVLALSQHRGVKEVMEWMSKTSSVPVS 170
Query: 1264 ELRPHLFLLRGSDAINHLFEVSAGLDSLILGDEQILGRVKQVVNFGEGVTGFGRSLNGLF 1085
EL H FLL +DA HLFEVSAGLDSL+LG+ QIL +VKQVV G+GV GFGR+++GLF
Sbjct: 171 ELSQHRFLLYNNDATQHLFEVSAGLDSLVLGEGQILSQVKQVVKVGQGVNGFGRNISGLF 230
Query: 1084 RYALRVGADVLTKTNIASGPIISVSSAAVELAIIKLPQNLSSTARVLVIGAGKMGRLVIN 905
++A+ VG V T+TNIASG +SVSSAAVELA +KLP+ AR+LVIGAGKMG+LVI
Sbjct: 231 KHAITVGKRVRTETNIASG-AVSVSSAAVELAYMKLPEASHDNARMLVIGAGKMGKLVIK 289
Query: 904 HLVAKGWTKIVVVNRSEHRVDAIREDLSGVEIIYKPLTEMLTCAGESDVVFTSTASNIPL 725
HLVAKG K+VVVNR+E RV AIRE+L +EIIYKPL+EMLTCAGE+D+VFTSTAS PL
Sbjct: 290 HLVAKGCKKMVVVNRTEERVAAIREELKDIEIIYKPLSEMLTCAGEADLVFTSTASENPL 349
Query: 724 FMKDNVETLPPVGTMNGGSRLFFDISVPRNVGSCVSDVENTQVYNVDDFKEVLAPKME-- 551
F+K++V+ LPP GG R F DISVPRNVGSCVSD+E+ +VYNVDD KEV+A E
Sbjct: 350 FLKEHVKDLPPASQEVGGRRFFIDISVPRNVGSCVSDLESVRVYNVDDLKEVVAANKEDR 409
Query: 550 -----EAQAIVAKNLDDFQDKMDSFETVPTIKNLRALVETIRITELERCLSKIKHDIPKK 386
EAQAI+A+ F+ DS ETVPTIK LRA E IR+ ELE+CL K+ DIPKK
Sbjct: 410 LRKAMEAQAIIAEESKQFEAWRDSLETVPTIKKLRAYAERIRLAELEKCLGKMGDDIPKK 469
Query: 385 TRRAIEDLSRGMMNKVLHGPMEHLRCDESNSRPLSEILENMHALNRMFSLETDASILEQK 206
TRRA++DLSRG++NK+LHGPM+HLRCD ++SR LSE LENM+ALNRMF+LET+ S+LE+K
Sbjct: 470 TRRAVDDLSRGIVNKLLHGPMQHLRCDGNDSRTLSETLENMNALNRMFNLETEISVLEEK 529
Query: 205 IRAKMEQSRK 176
IRAK+EQ++K
Sbjct: 530 IRAKVEQNQK 539