BLASTX nr result

ID: Coptis24_contig00012253 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012253
         (744 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274217.1| PREDICTED: uncharacterized protein LOC100258...   152   9e-35
gb|AFK41233.1| unknown [Lotus japonicus]                              137   2e-30
gb|AFK40698.1| unknown [Lotus japonicus]                              137   2e-30
ref|XP_002313489.1| predicted protein [Populus trichocarpa] gi|1...   134   3e-29
ref|NP_001238654.1| uncharacterized protein LOC100306681 precurs...   132   6e-29

>ref|XP_002274217.1| PREDICTED: uncharacterized protein LOC100258720 [Vitis vinifera]
           gi|147828169|emb|CAN68427.1| hypothetical protein
           VITISV_031997 [Vitis vinifera]
           gi|296084887|emb|CBI28296.3| unnamed protein product
           [Vitis vinifera]
          Length = 172

 Score =  152 bits (383), Expect = 9e-35
 Identities = 82/161 (50%), Positives = 103/161 (63%), Gaps = 4/161 (2%)
 Frame = -1

Query: 687 SIQSSTCHVVKGSVSCLDCTKNXXXXXXXXXXXXXXXKQFALATTEDDGSFEAELTADPS 508
           +I  STCHV+KGSV+CLDC ++               K+ A+ATTE DGSF+  L +D  
Sbjct: 18  TIDLSTCHVMKGSVTCLDCHRHHDFSGIKVLVKCDRVKKLAMATTEADGSFKTNLPSDTQ 77

Query: 507 ST----NCQAQLLGGPNQLCGYKKYLVSKIVKAQDSKSYTTSTPLAYGTSCSSRTKFPSS 340
           ++    NC A+LLGGPNQL  ++K  VSKIVKA+D  SYT STPL++ T+C      PSS
Sbjct: 78  TSSPPLNCLAKLLGGPNQLYAFRKNTVSKIVKARDDSSYTISTPLSFSTTC------PSS 131

Query: 339 PSNAKSGTAKPIYGSSKTVDLPLPREWGMPPTSYYFPILPI 217
              AK G     +GSSKTVDLPLP EWG+ P+SYY P  PI
Sbjct: 132 VKGAKYGE----FGSSKTVDLPLPPEWGLAPSSYYIPFFPI 168


>gb|AFK41233.1| unknown [Lotus japonicus]
          Length = 172

 Score =  137 bits (345), Expect = 2e-30
 Identities = 77/160 (48%), Positives = 99/160 (61%), Gaps = 4/160 (2%)
 Frame = -1

Query: 684 IQSSTCHVVKGSVSCLDCTKNXXXXXXXXXXXXXXXKQFALATTEDDGSFEAELTAD--- 514
           I  STC VV G VSC+DCT+N               K+ ALA+TED+G F+ +L +D   
Sbjct: 19  IDPSTCQVVNGKVSCVDCTQNHDLSDIKVLVKCEGVKKLALASTEDNGFFKVDLPSDKTK 78

Query: 513 PSST-NCQAQLLGGPNQLCGYKKYLVSKIVKAQDSKSYTTSTPLAYGTSCSSRTKFPSSP 337
           PSS  NC A+L+GGP QL   ++  VS+I+K+Q+  SYT STPL++  SC         P
Sbjct: 79  PSSAGNCLAKLVGGPVQLYATRQNQVSQIIKSQEPNSYTISTPLSFMKSC---------P 129

Query: 336 SNAKSGTAKPIYGSSKTVDLPLPREWGMPPTSYYFPILPI 217
            N     AKP+ GSSKTVDLPLP EWG+ P+SYY P +PI
Sbjct: 130 QNTNCKAAKPV-GSSKTVDLPLPPEWGLAPSSYYVPFIPI 168


>gb|AFK40698.1| unknown [Lotus japonicus]
          Length = 172

 Score =  137 bits (345), Expect = 2e-30
 Identities = 77/160 (48%), Positives = 99/160 (61%), Gaps = 4/160 (2%)
 Frame = -1

Query: 684 IQSSTCHVVKGSVSCLDCTKNXXXXXXXXXXXXXXXKQFALATTEDDGSFEAELTAD--- 514
           I  STC VV G VSC+DCT+N               K+ ALA+TED+G F+ +L +D   
Sbjct: 19  IDPSTCQVVNGKVSCVDCTQNHDLSDIKVLVKCEGVKKLALASTEDNGFFKVDLPSDKTK 78

Query: 513 PSST-NCQAQLLGGPNQLCGYKKYLVSKIVKAQDSKSYTTSTPLAYGTSCSSRTKFPSSP 337
           PSS  NC A+L+GGP QL   ++  VS+I+K+Q+  SYT STPL++  SC         P
Sbjct: 79  PSSAGNCLAKLVGGPVQLYATRQNQVSQIIKSQEPNSYTISTPLSFMKSC---------P 129

Query: 336 SNAKSGTAKPIYGSSKTVDLPLPREWGMPPTSYYFPILPI 217
            N     AKP+ GSSKTVDLPLP EWG+ P+SYY P +PI
Sbjct: 130 QNTNCKAAKPV-GSSKTVDLPLPPEWGLAPSSYYVPFIPI 168


>ref|XP_002313489.1| predicted protein [Populus trichocarpa] gi|118488493|gb|ABK96060.1|
           unknown [Populus trichocarpa]
           gi|222849897|gb|EEE87444.1| predicted protein [Populus
           trichocarpa]
          Length = 173

 Score =  134 bits (336), Expect = 3e-29
 Identities = 74/160 (46%), Positives = 96/160 (60%), Gaps = 4/160 (2%)
 Frame = -1

Query: 684 IQSSTCHVVKGSVSCLDCTKNXXXXXXXXXXXXXXXKQFALATTEDDGSFEAELTADPSS 505
           IQ STC V+KG VSCLDC  +               ++ A  TT+ DGSFE +L    S+
Sbjct: 19  IQLSTCQVLKGKVSCLDCGGHYDYSEIKVGVKCDKVRKLATTTTQSDGSFEVKLPPGTST 78

Query: 504 TN----CQAQLLGGPNQLCGYKKYLVSKIVKAQDSKSYTTSTPLAYGTSCSSRTKFPSSP 337
                 C A+LLGGP+QL   ++ +VSKIV+  DS SYT STPLA+ ++CS+        
Sbjct: 79  AATPLICLAKLLGGPSQLYVSRQNMVSKIVQTHDSNSYTISTPLAFSSTCSA-------- 130

Query: 336 SNAKSGTAKPIYGSSKTVDLPLPREWGMPPTSYYFPILPI 217
              K G +   +GSSKTVDLPLPREWG+ P+SYY P +PI
Sbjct: 131 GGGKCGVSNQ-FGSSKTVDLPLPREWGLAPSSYYVPFIPI 169


>ref|NP_001238654.1| uncharacterized protein LOC100306681 precursor [Glycine max]
           gi|255629265|gb|ACU14977.1| unknown [Glycine max]
          Length = 173

 Score =  132 bits (333), Expect = 6e-29
 Identities = 79/161 (49%), Positives = 96/161 (59%), Gaps = 5/161 (3%)
 Frame = -1

Query: 684 IQSSTCHVVKGSVSCLDCTKNXXXXXXXXXXXXXXXKQFALATTEDDGSFEAELTAD--- 514
           I  STC VV+G VSC+DCT N               K+ ALATTE+DGSF+ +L  D   
Sbjct: 19  IYPSTCQVVQGKVSCVDCTHNYDLSDIKVSVRCDGVKKLALATTENDGSFKVDLPLDHTK 78

Query: 513 PSST--NCQAQLLGGPNQLCGYKKYLVSKIVKAQDSKSYTTSTPLAYGTSCSSRTKFPSS 340
           PSS+  NC A+LLGGP QL   ++  VS+I+K +D  SYT ST L++ TSC   TK    
Sbjct: 79  PSSSVNNCLAKLLGGPVQLYVSRENQVSQIIKGKDQNSYTISTSLSFRTSCPLTTK---- 134

Query: 339 PSNAKSGTAKPIYGSSKTVDLPLPREWGMPPTSYYFPILPI 217
               K G      GSSKTVDLPLP EWG+ P+SYY P  PI
Sbjct: 135 ---CKGGKQ---VGSSKTVDLPLPPEWGLAPSSYYVPFFPI 169


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