BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012248
         (1081 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004172929.1| PREDICTED: poly(rC)-binding protein 3-like [...   243   6e-62
ref|XP_004139248.1| PREDICTED: poly(rC)-binding protein 3-like [...   243   6e-62
ref|XP_003521747.1| PREDICTED: KH domain-containing protein At4g...   242   1e-61
emb|CBI35182.3| unnamed protein product [Vitis vinifera]              238   3e-60
ref|XP_002269249.1| PREDICTED: poly(rC)-binding protein 3-like [...   238   3e-60

>ref|XP_004172929.1| PREDICTED: poly(rC)-binding protein 3-like [Cucumis sativus]
          Length = 453

 Score =  243 bits (620), Expect = 6e-62
 Identities = 122/181 (67%), Positives = 149/181 (82%), Gaps = 3/181 (1%)
 Frame = +3

Query: 477  PRSSAFTLVLISAKDEPESSCPPAVDGLLRVHNRVVEGLEPDLSQATSNSGGTISSRLLV 656
            P  +A   V++SAKDEP+S+ PPAVDGLLRVH R+V+GLE D + A  N+G  +S+RLLV
Sbjct: 124  PPGTAERAVMVSAKDEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHAP-NAGSKVSTRLLV 182

Query: 657  GATQAGSLIGKLGSTIKSIQEASNCIIRVLGQDDLPLFALEDDRIVEVQGEPSGVQTAME 836
             A+QAGSLIGK G T+KSIQE SNCI+RVLG +DLP+FAL+DDR+VEV G+P+GV  A+E
Sbjct: 183  AASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVE 242

Query: 837  LIASHLRKFLVDRSVIGLFEMHMQNLHPQMDHNM--PPHQSWG-PQGFPHNAGGGPGFGP 1007
            LIASHLRKFLVDRS+I +FEM+MQ  +PQMD +M  PPHQ WG PQG P NAGGGPGFGP
Sbjct: 243  LIASHLRKFLVDRSIIPVFEMNMQMSNPQMDQHMPPPPHQPWGPPQGMPPNAGGGPGFGP 302

Query: 1008 H 1010
            +
Sbjct: 303  N 303



 Score =  119 bits (298), Expect = 1e-24
 Identities = 60/95 (63%), Positives = 70/95 (73%), Gaps = 1/95 (1%)
 Frame = +2

Query: 47  ADSVEDYSE-QEVILPDNSHVEQPERHVEDSAGENVEKRWPGWPGESVFRMLVPSHKVGG 223
           A  VE+  E Q   +P+    E  + H+ED      EK+WPGWPGESVFRMLVP+ KVG 
Sbjct: 39  AQEVENLHELQNEHIPETLESEPKQVHIEDPLTVVSEKKWPGWPGESVFRMLVPAQKVGS 98

Query: 224 IIGRKGEFIKKMCEETRARIKILEGPPGTQERAVL 328
           IIGRKGEFIKK+ EETRARIKIL+GPPGT ERAV+
Sbjct: 99  IIGRKGEFIKKIVEETRARIKILDGPPGTAERAVM 133


>ref|XP_004139248.1| PREDICTED: poly(rC)-binding protein 3-like [Cucumis sativus]
          Length = 483

 Score =  243 bits (620), Expect = 6e-62
 Identities = 122/181 (67%), Positives = 149/181 (82%), Gaps = 3/181 (1%)
 Frame = +3

Query: 477  PRSSAFTLVLISAKDEPESSCPPAVDGLLRVHNRVVEGLEPDLSQATSNSGGTISSRLLV 656
            P  +A   V++SAKDEP+S+ PPAVDGLLRVH R+V+GLE D + A  N+G  +S+RLLV
Sbjct: 124  PPGTAERAVMVSAKDEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHAP-NAGSKVSTRLLV 182

Query: 657  GATQAGSLIGKLGSTIKSIQEASNCIIRVLGQDDLPLFALEDDRIVEVQGEPSGVQTAME 836
             A+QAGSLIGK G T+KSIQE SNCI+RVLG +DLP+FAL+DDR+VEV G+P+GV  A+E
Sbjct: 183  AASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVE 242

Query: 837  LIASHLRKFLVDRSVIGLFEMHMQNLHPQMDHNM--PPHQSWG-PQGFPHNAGGGPGFGP 1007
            LIASHLRKFLVDRS+I +FEM+MQ  +PQMD +M  PPHQ WG PQG P NAGGGPGFGP
Sbjct: 243  LIASHLRKFLVDRSIIPVFEMNMQMSNPQMDQHMPPPPHQPWGPPQGMPPNAGGGPGFGP 302

Query: 1008 H 1010
            +
Sbjct: 303  N 303



 Score =  119 bits (298), Expect = 1e-24
 Identities = 60/95 (63%), Positives = 70/95 (73%), Gaps = 1/95 (1%)
 Frame = +2

Query: 47  ADSVEDYSE-QEVILPDNSHVEQPERHVEDSAGENVEKRWPGWPGESVFRMLVPSHKVGG 223
           A  VE+  E Q   +P+    E  + H+ED      EK+WPGWPGESVFRMLVP+ KVG 
Sbjct: 39  AQEVENLHELQNEHIPETLESEPKQVHIEDPLTVVSEKKWPGWPGESVFRMLVPAQKVGS 98

Query: 224 IIGRKGEFIKKMCEETRARIKILEGPPGTQERAVL 328
           IIGRKGEFIKK+ EETRARIKIL+GPPGT ERAV+
Sbjct: 99  IIGRKGEFIKKIVEETRARIKILDGPPGTAERAVM 133


>ref|XP_003521747.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine max]
          Length = 443

 Score =  242 bits (617), Expect = 1e-61
 Identities = 117/178 (65%), Positives = 142/178 (79%), Gaps = 1/178 (0%)
 Frame = +3

Query: 477  PRSSAFTLVLISAKDEPESSCPPAVDGLLRVHNRVVEGLEPDLSQATSNSGGTISSRLLV 656
            P  +    V+ISAK+EP SS PPAVDGLLR+H R+++GLE D + A S   G +S++LLV
Sbjct: 83   PPGTVQRAVMISAKEEPGSSVPPAVDGLLRIHKRIIDGLESDFTHAPSGVAGKVSTKLLV 142

Query: 657  GATQAGSLIGKLGSTIKSIQEASNCIIRVLGQDDLPLFALEDDRIVEVQGEPSGVQTAME 836
             A+QAGSLIGK G T+KSIQEASNCI+RVLG +DLP+FAL+DDR+VEV G+P+GV  A+E
Sbjct: 143  PASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPIFALQDDRVVEVVGDPAGVHKALE 202

Query: 837  LIASHLRKFLVDRSVIGLFEMHMQNLHPQMDHNMPPHQSWGP-QGFPHNAGGGPGFGP 1007
            LIASHLRKFLVDR VI +FEM+MQ  +P    +MPPHQSWGP QG P N GGGPGFGP
Sbjct: 203  LIASHLRKFLVDRGVIPIFEMNMQTANPHHAEHMPPHQSWGPSQGLPPNVGGGPGFGP 260



 Score =  110 bits (275), Expect = 6e-22
 Identities = 54/77 (70%), Positives = 61/77 (79%), Gaps = 3/77 (3%)
 Frame = +2

Query: 107 EQPERHVEDSAGENV---EKRWPGWPGESVFRMLVPSHKVGGIIGRKGEFIKKMCEETRA 277
           E  E   E   GE     EK+WPGWPGESVFRMLVP+ KVGGIIGRKGEFIKK+ EETRA
Sbjct: 16  ETIEIEAEVHGGEEAVVAEKKWPGWPGESVFRMLVPAQKVGGIIGRKGEFIKKIVEETRA 75

Query: 278 RIKILEGPPGTQERAVL 328
           R+KIL+GPPGT +RAV+
Sbjct: 76  RVKILDGPPGTVQRAVM 92


>emb|CBI35182.3| unnamed protein product [Vitis vinifera]
          Length = 511

 Score =  238 bits (606), Expect = 3e-60
 Identities = 121/179 (67%), Positives = 144/179 (80%), Gaps = 1/179 (0%)
 Frame = +3

Query: 477  PRSSAFTLVLISAKDEPESSCPPAVDGLLRVHNRVVEGLEPDLSQATSNSGGTISSRLLV 656
            P  +A   V++SAK+EP+SS PPA+DGLL+VH R+V+GLE D S      GG +S+RLLV
Sbjct: 156  PPGTAERAVMVSAKEEPDSSLPPAMDGLLKVHKRIVDGLEGDSSHMPP--GGKVSTRLLV 213

Query: 657  GATQAGSLIGKLGSTIKSIQEASNCIIRVLGQDDLPLFALEDDRIVEVQGEPSGVQTAME 836
             A+QAGSLIGK G T+KSIQEASNCI+RVLG +DLP+FAL+DDR+VEV GEP GV  A+E
Sbjct: 214  AASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPIFALQDDRVVEVVGEPIGVHKAVE 273

Query: 837  LIASHLRKFLVDRSVIGLFEMHMQNLHPQMDHNMPPHQSWG-PQGFPHNAGGGPGFGPH 1010
            LIASHLRKFLVDRSVI LFEM MQ  +P ++H MPPHQ WG PQG P NA GGPGFGP+
Sbjct: 274  LIASHLRKFLVDRSVIPLFEMQMQMSNPPIEH-MPPHQPWGPPQGLPPNASGGPGFGPN 331



 Score =  123 bits (308), Expect = 9e-26
 Identities = 62/96 (64%), Positives = 75/96 (78%), Gaps = 1/96 (1%)
 Frame = +2

Query: 44  MADSVEDYSEQEVI-LPDNSHVEQPERHVEDSAGENVEKRWPGWPGESVFRMLVPSHKVG 220
           MA+  E++ E ++  LP++S  +Q     +DSA    EKRWPGWPGESVFRMLVP+ KVG
Sbjct: 70  MAEVEENFGEPDMDQLPEDSQPQQKRGRDDDSAIGGGEKRWPGWPGESVFRMLVPAQKVG 129

Query: 221 GIIGRKGEFIKKMCEETRARIKILEGPPGTQERAVL 328
            IIGRKGEFIKK+ EETRARIKIL+GPPGT ERAV+
Sbjct: 130 SIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVM 165


>ref|XP_002269249.1| PREDICTED: poly(rC)-binding protein 3-like [Vitis vinifera]
          Length = 442

 Score =  238 bits (606), Expect = 3e-60
 Identities = 121/179 (67%), Positives = 144/179 (80%), Gaps = 1/179 (0%)
 Frame = +3

Query: 477  PRSSAFTLVLISAKDEPESSCPPAVDGLLRVHNRVVEGLEPDLSQATSNSGGTISSRLLV 656
            P  +A   V++SAK+EP+SS PPA+DGLL+VH R+V+GLE D S      GG +S+RLLV
Sbjct: 87   PPGTAERAVMVSAKEEPDSSLPPAMDGLLKVHKRIVDGLEGDSSHMPP--GGKVSTRLLV 144

Query: 657  GATQAGSLIGKLGSTIKSIQEASNCIIRVLGQDDLPLFALEDDRIVEVQGEPSGVQTAME 836
             A+QAGSLIGK G T+KSIQEASNCI+RVLG +DLP+FAL+DDR+VEV GEP GV  A+E
Sbjct: 145  AASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPIFALQDDRVVEVVGEPIGVHKAVE 204

Query: 837  LIASHLRKFLVDRSVIGLFEMHMQNLHPQMDHNMPPHQSWG-PQGFPHNAGGGPGFGPH 1010
            LIASHLRKFLVDRSVI LFEM MQ  +P ++H MPPHQ WG PQG P NA GGPGFGP+
Sbjct: 205  LIASHLRKFLVDRSVIPLFEMQMQMSNPPIEH-MPPHQPWGPPQGLPPNASGGPGFGPN 262



 Score =  123 bits (308), Expect = 9e-26
 Identities = 62/96 (64%), Positives = 75/96 (78%), Gaps = 1/96 (1%)
 Frame = +2

Query: 44  MADSVEDYSEQEVI-LPDNSHVEQPERHVEDSAGENVEKRWPGWPGESVFRMLVPSHKVG 220
           MA+  E++ E ++  LP++S  +Q     +DSA    EKRWPGWPGESVFRMLVP+ KVG
Sbjct: 1   MAEVEENFGEPDMDQLPEDSQPQQKRGRDDDSAIGGGEKRWPGWPGESVFRMLVPAQKVG 60

Query: 221 GIIGRKGEFIKKMCEETRARIKILEGPPGTQERAVL 328
            IIGRKGEFIKK+ EETRARIKIL+GPPGT ERAV+
Sbjct: 61  SIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVM 96