BLASTX nr result
ID: Coptis24_contig00012246
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00012246
(1492 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002511999.1| RNA binding protein, putative [Ricinus commu... 630 e-178
ref|XP_002318558.1| predicted protein [Populus trichocarpa] gi|2... 617 e-174
emb|CBI15390.3| unnamed protein product [Vitis vinifera] 609 e-172
ref|XP_002271556.1| PREDICTED: G patch domain-containing protein... 609 e-172
ref|XP_004138338.1| PREDICTED: G patch domain-containing protein... 604 e-170
>ref|XP_002511999.1| RNA binding protein, putative [Ricinus communis]
gi|223549179|gb|EEF50668.1| RNA binding protein, putative
[Ricinus communis]
Length = 1000
Score = 630 bits (1626), Expect = e-178
Identities = 319/499 (63%), Positives = 384/499 (76%), Gaps = 2/499 (0%)
Frame = +1
Query: 1 EEEDLVFYGTPIEREEDLTSRKKKSVAEAAGQLRAVVPWQQEVRDEEGRRRFHGAFTGGY 180
+EED VFYGTPIEREE++TSRKKK+VAEA+G LR +VPW+QEVRDEEGRRRFHGAFTGGY
Sbjct: 4 DEEDFVFYGTPIEREEEITSRKKKAVAEASGHLRTLVPWKQEVRDEEGRRRFHGAFTGGY 63
Query: 181 SAGYYNTVGSKEGWTPQTFTSSRKKRAETKEQSILNFLDDDEKAEMDGRSLATSALFDTF 360
SAGYYNTVGSKEGWTPQ+FTSSRK RAE K+Q+ILNFLDDDE+AE++ RSL TS+ FDTF
Sbjct: 64 SAGYYNTVGSKEGWTPQSFTSSRKNRAEVKQQNILNFLDDDERAELEDRSLGTSSQFDTF 123
Query: 361 GFTAADVAQKQAEKEQLKRPSAIPGPVPDEIVRPAANSIGMKLLLKMGWRHGHSIKDPRT 540
GFTAA+ A+KQAEKEQ +RPSAIPGPVPDE+V PA SIG+KLLLKMGWRHGHSI+ R
Sbjct: 124 GFTAAEYARKQAEKEQQQRPSAIPGPVPDELVLPATESIGVKLLLKMGWRHGHSIRGSRA 183
Query: 541 NLPYDARREARKAFLAFSSDDAKPSLARFEP--DDIASEGDNEQSTDDIASASKSTPVFV 714
N YDARREARKA LA SSDDA + EP DD+ S G S +D S+STPVFV
Sbjct: 184 NSLYDARREARKALLALSSDDANVHCIKSEPGEDDLGSLG---LSVNDDVQTSRSTPVFV 240
Query: 715 LNPKQDMHGLGFDPFKHAPEFRERKRLCVSGNQELGSRGVFPLKDDLFASKSGKIAPGFG 894
LNPKQD++GLG+DP+KHAPEFRE+KR VS N+E G+R ++D LF KSGK APGFG
Sbjct: 241 LNPKQDLYGLGYDPYKHAPEFREKKRSRVSDNREPGNRKALLMRDGLFGFKSGKAAPGFG 300
Query: 895 IGXXXXXXXXXXXVYASGYNFEETYVQDIEEPSTINRDIKLIKSKDEEGALPGFKFASSS 1074
IG +Y + Y+FEET V+++EEP+ I+ D K E+G LPGF+ AS+S
Sbjct: 301 IGALEEYDAEDEDLYGTAYDFEETCVEEVEEPARISTDHKQKLVWKEQGVLPGFRVASNS 360
Query: 1075 DFQLERFNPPVIPNDFKPLHKFSAALEIGKKLAGPPPPEVSPPRDKDRKLLIDGFAALVN 1254
D+QLERF+PPVIP DF P HKF +L+ K PPPPEV PP D + KLLI+G A LV
Sbjct: 361 DYQLERFDPPVIPKDFVPHHKFPGSLQADDKHTIPPPPEVPPPDDNNLKLLIEGVATLVA 420
Query: 1255 RCGKLFEELSREKNKTNPLFSFLSGGDGHDYYARRLWEEXXXXXXXXXXXVDMESVPSLQ 1434
RCGKLFE+LSR+KN++NPLFSFL+GG+GH+YYAR+LWEE D + + +L
Sbjct: 421 RCGKLFEDLSRDKNQSNPLFSFLNGGNGHEYYARKLWEECQKCN-------DQKHL-ALD 472
Query: 1435 KESVPSLQKMTAESRGRIL 1491
+S S+Q+MTAESR +L
Sbjct: 473 GKSSSSVQRMTAESRANLL 491
>ref|XP_002318558.1| predicted protein [Populus trichocarpa] gi|222859231|gb|EEE96778.1|
predicted protein [Populus trichocarpa]
Length = 965
Score = 617 bits (1590), Expect = e-174
Identities = 314/501 (62%), Positives = 377/501 (75%), Gaps = 4/501 (0%)
Frame = +1
Query: 1 EEEDLVFYGTPIEREEDLTSRKKKSVAEAAGQLRAVVPWQQEVRDEEGRRRFHGAFTGGY 180
+E+D VFYGTPIEREE+L SRKKK+VAEA+G LR + W+QEVRDEEGRRRFHGAFTGG+
Sbjct: 4 DEDDFVFYGTPIEREEELNSRKKKAVAEASGHLRTLPSWKQEVRDEEGRRRFHGAFTGGF 63
Query: 181 SAGYYNTVGSKEGWTPQTFTSSRKKRAETKEQSILNFLDDDEKAEMDGRSLATSALFDTF 360
SAGYYNT GSKEGWTPQ+FTSSRK RAE K+QS+LNFLD+DEK E++GRSL T++ FDTF
Sbjct: 64 SAGYYNTAGSKEGWTPQSFTSSRKNRAEFKQQSMLNFLDEDEKEELEGRSLGTASQFDTF 123
Query: 361 GFTAADVAQKQAEKEQLKRPSAIPGPVPDEIVRPAANSIGMKLLLKMGWRHGHSIKDPRT 540
GFTAA++A+KQAEKEQ +RPSA+PGP PDEIV PA SIG+KLLLKMGWRHGHSIKD
Sbjct: 124 GFTAAEIARKQAEKEQQQRPSAVPGPAPDEIVLPATESIGVKLLLKMGWRHGHSIKDSHA 183
Query: 541 NLPYDARREARKAFLAFSSDDAKPSLARFEP--DDIASEGDNEQSTDDIASASKSTPVFV 714
N Y ARREARKAFLAFSSDDAK EP +D S D+ Q DD +S+STPV++
Sbjct: 184 NSLYKARREARKAFLAFSSDDAKSQPEDSEPGEEDHKSILDH-QPIDDGFPSSQSTPVYI 242
Query: 715 LNPKQDMHGLGFDPFKHAPEFRERKRLCVSGNQELGSRGVFPLKDDLFASKSGKIAPGFG 894
LNPK+D HGLG+DP+KHAPEFRE+KR VSG + G++ +KD LF KSG+ APGFG
Sbjct: 243 LNPKEDTHGLGYDPYKHAPEFREKKRTRVSGKRGSGNKQALSIKDSLFGLKSGRAAPGFG 302
Query: 895 IGXXXXXXXXXXXVYASGYNFEETYVQDIEEPSTINRDIKLIKSKDEEGALPGFKFASSS 1074
IG VYA+ Y+ E+TY+Q+ EEP N + K E+G LPGFK AS+S
Sbjct: 303 IGALEDYDAEDEDVYATAYDIEDTYIQEDEEPLRSNTENKPKLVWKEQGVLPGFKVASNS 362
Query: 1075 DFQLERFNPPVIPNDFKPLHKFSAALEIGKKLA--GPPPPEVSPPRDKDRKLLIDGFAAL 1248
D+QLERF+PPVIP DF P HKF LE KK A PPPPEV PP D + K+LI+G A L
Sbjct: 363 DYQLERFDPPVIPKDFLPHHKFPGPLEFDKKPATLSPPPPEVPPPEDDNSKVLIEGVATL 422
Query: 1249 VNRCGKLFEELSREKNKTNPLFSFLSGGDGHDYYARRLWEEXXXXXXXXXXXVDMESVPS 1428
V RCGKLFE+LSREKN++NPLFSFL+GG+GHDYY+R+LWEE + + +
Sbjct: 423 VARCGKLFEDLSREKNQSNPLFSFLTGGNGHDYYSRKLWEEQQKR--------NGQKKIA 474
Query: 1429 LQKESVPSLQKMTAESRGRIL 1491
L + S+ KMT ESRG+IL
Sbjct: 475 LDGKLSSSVDKMTVESRGKIL 495
>emb|CBI15390.3| unnamed protein product [Vitis vinifera]
Length = 944
Score = 609 bits (1571), Expect = e-172
Identities = 314/498 (63%), Positives = 375/498 (75%), Gaps = 1/498 (0%)
Frame = +1
Query: 1 EEEDLVFYGTPIEREEDLTSRKKKSVAEAAGQLRAVVPWQQEVRDEEGRRRFHGAFTGGY 180
+EED VFYGTPIEREE++TSRKKK+VAE++G LR++ PW+QEV DEEGRRRFHGAFTGG+
Sbjct: 4 DEEDYVFYGTPIEREEEMTSRKKKAVAESSGLLRSLPPWKQEVTDEEGRRRFHGAFTGGF 63
Query: 181 SAGYYNTVGSKEGWTPQTFTSSRKKRAETKEQSILNFLDDDEKAEMDGRSLATSALFDTF 360
SAG+YNTVGSKEGW PQ+FTSSRK RAE K+QSI +FLDDDE AEM+G SL TS FDTF
Sbjct: 64 SAGFYNTVGSKEGWAPQSFTSSRKNRAEVKKQSIFSFLDDDEIAEMEGHSLGTSLQFDTF 123
Query: 361 GFTAADVAQKQAEKEQLKRPSAIPGPVPDEIVRPAANSIGMKLLLKMGWRHGHSIKDPRT 540
GFTAA++A+KQAEKEQ +RPSAIPGP+PDEIV A SIG+KLLLKMGWR G+SIKD T
Sbjct: 124 GFTAAELARKQAEKEQQQRPSAIPGPLPDEIVLLATESIGVKLLLKMGWRRGNSIKDSHT 183
Query: 541 NLPYDARREARKAFLAFSSDDAKPSLARFEPDDIASEGDNEQSTDDIASASKSTPVFVLN 720
N YDARREARKAFLA SSDD LA E + E +D +S+STPV+VLN
Sbjct: 184 NSLYDARREARKAFLALSSDDVSTDLAVSEGVKSDLQNAIELPANDDLKSSESTPVYVLN 243
Query: 721 PKQDMHGLGFDPFKHAPEFRERKRLCVSGNQELGSRGVFPLKDDLFASKSGKIAPGFGIG 900
PKQD+HGLG+DPFKHAPEFRE+KRL +SG +ELG LK+DLFA KS K+APGFGIG
Sbjct: 244 PKQDLHGLGYDPFKHAPEFREKKRLRMSGKKELG------LKNDLFAFKSRKVAPGFGIG 297
Query: 901 XXXXXXXXXXXVYASGYNFEETYVQDIEEPSTINRDIKLIKSKDEEGALPGFKFASSSDF 1080
VYASGY+FE+ Y+Q++EEPS + + K E+G L GFK AS D+
Sbjct: 298 ALEELDVEDEDVYASGYDFEDNYIQEVEEPSGLVIESKQKLGSKEKGVLSGFKVASKLDY 357
Query: 1081 QLERFNPPVIPNDFKPLHKFSAALEIGKKLAG-PPPPEVSPPRDKDRKLLIDGFAALVNR 1257
QLERF+PPV+P +F P HKF A L+ K G PPPPE P D + KLLI+G A LV R
Sbjct: 358 QLERFDPPVVPKNFVPHHKFHAPLDDSNKHDGDPPPPEAIAPEDNNLKLLIEGVATLVAR 417
Query: 1258 CGKLFEELSREKNKTNPLFSFLSGGDGHDYYARRLWEEXXXXXXXXXXXVDMESVPSLQK 1437
CGKLFE+LSREKN++NPLFSFL+GG+G DYYAR+LWEE +D+
Sbjct: 418 CGKLFEDLSREKNQSNPLFSFLTGGNGCDYYARKLWEERQKHNDKSKQLLDV-------- 469
Query: 1438 ESVPSLQKMTAESRGRIL 1491
+S P++QKMTAESRG+IL
Sbjct: 470 KSSPTVQKMTAESRGKIL 487
>ref|XP_002271556.1| PREDICTED: G patch domain-containing protein 1-like [Vitis vinifera]
Length = 997
Score = 609 bits (1571), Expect = e-172
Identities = 314/498 (63%), Positives = 375/498 (75%), Gaps = 1/498 (0%)
Frame = +1
Query: 1 EEEDLVFYGTPIEREEDLTSRKKKSVAEAAGQLRAVVPWQQEVRDEEGRRRFHGAFTGGY 180
+EED VFYGTPIEREE++TSRKKK+VAE++G LR++ PW+QEV DEEGRRRFHGAFTGG+
Sbjct: 4 DEEDYVFYGTPIEREEEMTSRKKKAVAESSGLLRSLPPWKQEVTDEEGRRRFHGAFTGGF 63
Query: 181 SAGYYNTVGSKEGWTPQTFTSSRKKRAETKEQSILNFLDDDEKAEMDGRSLATSALFDTF 360
SAG+YNTVGSKEGW PQ+FTSSRK RAE K+QSI +FLDDDE AEM+G SL TS FDTF
Sbjct: 64 SAGFYNTVGSKEGWAPQSFTSSRKNRAEVKKQSIFSFLDDDEIAEMEGHSLGTSLQFDTF 123
Query: 361 GFTAADVAQKQAEKEQLKRPSAIPGPVPDEIVRPAANSIGMKLLLKMGWRHGHSIKDPRT 540
GFTAA++A+KQAEKEQ +RPSAIPGP+PDEIV A SIG+KLLLKMGWR G+SIKD T
Sbjct: 124 GFTAAELARKQAEKEQQQRPSAIPGPLPDEIVLLATESIGVKLLLKMGWRRGNSIKDSHT 183
Query: 541 NLPYDARREARKAFLAFSSDDAKPSLARFEPDDIASEGDNEQSTDDIASASKSTPVFVLN 720
N YDARREARKAFLA SSDD LA E + E +D +S+STPV+VLN
Sbjct: 184 NSLYDARREARKAFLALSSDDVSTDLAVSEGVKSDLQNAIELPANDDLKSSESTPVYVLN 243
Query: 721 PKQDMHGLGFDPFKHAPEFRERKRLCVSGNQELGSRGVFPLKDDLFASKSGKIAPGFGIG 900
PKQD+HGLG+DPFKHAPEFRE+KRL +SG +ELG LK+DLFA KS K+APGFGIG
Sbjct: 244 PKQDLHGLGYDPFKHAPEFREKKRLRMSGKKELG------LKNDLFAFKSRKVAPGFGIG 297
Query: 901 XXXXXXXXXXXVYASGYNFEETYVQDIEEPSTINRDIKLIKSKDEEGALPGFKFASSSDF 1080
VYASGY+FE+ Y+Q++EEPS + + K E+G L GFK AS D+
Sbjct: 298 ALEELDVEDEDVYASGYDFEDNYIQEVEEPSGLVIESKQKLGSKEKGVLSGFKVASKLDY 357
Query: 1081 QLERFNPPVIPNDFKPLHKFSAALEIGKKLAG-PPPPEVSPPRDKDRKLLIDGFAALVNR 1257
QLERF+PPV+P +F P HKF A L+ K G PPPPE P D + KLLI+G A LV R
Sbjct: 358 QLERFDPPVVPKNFVPHHKFHAPLDDSNKHDGDPPPPEAIAPEDNNLKLLIEGVATLVAR 417
Query: 1258 CGKLFEELSREKNKTNPLFSFLSGGDGHDYYARRLWEEXXXXXXXXXXXVDMESVPSLQK 1437
CGKLFE+LSREKN++NPLFSFL+GG+G DYYAR+LWEE +D+
Sbjct: 418 CGKLFEDLSREKNQSNPLFSFLTGGNGCDYYARKLWEERQKHNDKSKQLLDV-------- 469
Query: 1438 ESVPSLQKMTAESRGRIL 1491
+S P++QKMTAESRG+IL
Sbjct: 470 KSSPTVQKMTAESRGKIL 487
>ref|XP_004138338.1| PREDICTED: G patch domain-containing protein 1-like [Cucumis sativus]
Length = 1001
Score = 604 bits (1557), Expect = e-170
Identities = 311/503 (61%), Positives = 377/503 (74%), Gaps = 6/503 (1%)
Frame = +1
Query: 1 EEEDLVFYGTPIEREEDLTSRKKKSVAEAAGQLRAVVPWQQEVRDEEGRRRFHGAFTGGY 180
+EED VFYGTPIEREE++ SRK+KSVA+A+G +R + W+QEVRDEEGRRRFHGAFTGG+
Sbjct: 4 DEEDFVFYGTPIEREEEINSRKRKSVADASGTMRTLPHWKQEVRDEEGRRRFHGAFTGGF 63
Query: 181 SAGYYNTVGSKEGWTPQTFTSSRKKRAETKEQSILNFLDDDEKAEMDGRSLATSALFDTF 360
SAG+YNTVGSKEGWTPQ+FTSSRK RAE K+Q+ILNFLD+DEKAE++GR L TSA FDTF
Sbjct: 64 SAGHYNTVGSKEGWTPQSFTSSRKNRAEVKQQNILNFLDEDEKAELEGRGLGTSAQFDTF 123
Query: 361 GFTAADVAQKQAEKEQLKRPSAIPGPVPDEIVRPAANSIGMKLLLKMGWRHGHSIKDPRT 540
GFTA ++A+KQA+KEQ +RPSAIPGPVPDE++ PAA SIG+KLLLKMGWRHG +IKD R
Sbjct: 124 GFTAVELARKQADKEQQQRPSAIPGPVPDELIVPAAESIGVKLLLKMGWRHGRAIKDSRA 183
Query: 541 NLPYDARREARKAFLAFSSDDAKPSLARFEP----DDIASEGDNEQSTDDIASASKSTPV 708
N YDARR+ARKAFLAFS+ D K + EP DDI S Q S+S+STPV
Sbjct: 184 NSRYDARRDARKAFLAFSTGDVKSEIPNSEPFQEDDDIVS----PQLAKGDVSSSQSTPV 239
Query: 709 FVLNPKQDMHGLGFDPFKHAPEFRERKRLCVSGNQELGSRGVFPLKDDLFASKSGKIAPG 888
+V+NPKQD+HGLGFDP+KHAPEF E+KR +GNQE G + VF K++LF ++ +IA G
Sbjct: 240 YVINPKQDLHGLGFDPYKHAPEFMEKKRARTAGNQE-GYKKVFSTKNNLFGFRTERIASG 298
Query: 889 FGIGXXXXXXXXXXXVYASGYNFEETYVQDIEEPST--INRDIKLIKSKDEEGALPGFKF 1062
FGIG VY SGY FEETYVQ+ +EP + I + + + EG L GF+
Sbjct: 299 FGIGALEELDVEDEDVYTSGYEFEETYVQEEDEPPSKMITDGKQKLIGRKVEGVLLGFRI 358
Query: 1063 ASSSDFQLERFNPPVIPNDFKPLHKFSAALEIGKKLAGPPPPEVSPPRDKDRKLLIDGFA 1242
AS SD+Q+ERF+PPVIP DF P HKF+ L G KLA PP EV PP D + KLLI+G A
Sbjct: 359 ASKSDYQMERFDPPVIPKDFIPHHKFAGPLIGGYKLADTPPVEVPPPEDNNLKLLIEGVA 418
Query: 1243 ALVNRCGKLFEELSREKNKTNPLFSFLSGGDGHDYYARRLWEEXXXXXXXXXXXVDMESV 1422
LV RCGKLFE+LSREKNK+NPLFSFL+GG G +YY+R+LWEE VD +
Sbjct: 419 TLVARCGKLFEDLSREKNKSNPLFSFLNGGTGQEYYSRKLWEE-------QLKRVD-QPK 470
Query: 1423 PSLQKESVPSLQKMTAESRGRIL 1491
P + PSL+KMTAESRG+IL
Sbjct: 471 PQFDDKLSPSLKKMTAESRGKIL 493