BLASTX nr result

ID: Coptis24_contig00012229 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012229
         (565 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264856.1| PREDICTED: uncharacterized protein LOC100256...   132   3e-29
emb|CAN75300.1| hypothetical protein VITISV_008677 [Vitis vinifera]   130   1e-28
ref|XP_004152015.1| PREDICTED: uncharacterized protein LOC101207...   123   2e-26
ref|XP_002521134.1| conserved hypothetical protein [Ricinus comm...   122   4e-26
ref|XP_002303086.1| predicted protein [Populus trichocarpa] gi|1...   117   1e-24

>ref|XP_002264856.1| PREDICTED: uncharacterized protein LOC100256241 [Vitis vinifera]
           gi|297744291|emb|CBI37261.3| unnamed protein product
           [Vitis vinifera]
          Length = 175

 Score =  132 bits (333), Expect = 3e-29
 Identities = 74/133 (55%), Positives = 89/133 (66%), Gaps = 6/133 (4%)
 Frame = +2

Query: 179 QTQKRLKLQRHSRNAPVVVSAQFDILRVLQTAWKVGKDGIEAGTDLVPASIPRPLARXXX 358
           QTQK L++ R SR+ PVV ++Q + LRV+QT WK+GKDGIEAGT+LVP S+PRP+AR   
Sbjct: 45  QTQK-LRI-RKSRSRPVVCASQSNFLRVIQTVWKIGKDGIEAGTNLVPESVPRPIARISV 102

Query: 359 XXXXXXXXXXXXXXXXXTAFFVLGVMGLVYFVFIALNKDDGPR------XXXXXNVTTDD 520
                            TAFFVL +MGL+YF FIALNKDDGPR             +T+D
Sbjct: 103 TVVTLAVALFVFKSFLSTAFFVLAMMGLIYFTFIALNKDDGPRGGGGGGGVDGGTPSTED 162

Query: 521 SLEEARRIMEKYK 559
           SLEEARRIMEKYK
Sbjct: 163 SLEEARRIMEKYK 175


>emb|CAN75300.1| hypothetical protein VITISV_008677 [Vitis vinifera]
          Length = 221

 Score =  130 bits (328), Expect = 1e-28
 Identities = 73/130 (56%), Positives = 88/130 (67%), Gaps = 5/130 (3%)
 Frame = +2

Query: 179 QTQKRLKLQRHSRNAPVVVSAQFDILRVLQTAWKVGKDGIEAGTDLVPASIPRPLARXXX 358
           QTQK L++ R SR+ PVV ++Q + LRV+QT WK+GKDGIEAGT+LVP S+PRP+AR   
Sbjct: 45  QTQK-LRI-RKSRSRPVVCASQSNFLRVIQTVWKIGKDGIEAGTNLVPESVPRPIARISV 102

Query: 359 XXXXXXXXXXXXXXXXXTAFFVLGVMGLVYFVFIALNKDDGPRXXXXXNV-----TTDDS 523
                            TAFFVL +MGL+YF FIALNKDDGPR      V     +T+DS
Sbjct: 103 TVVTLAVALFVFKSFLSTAFFVLAMMGLIYFTFIALNKDDGPRGGGGGGVDGGTPSTEDS 162

Query: 524 LEEARRIMEK 553
           LEEARRIMEK
Sbjct: 163 LEEARRIMEK 172


>ref|XP_004152015.1| PREDICTED: uncharacterized protein LOC101207451 [Cucumis sativus]
           gi|449507470|ref|XP_004163041.1| PREDICTED:
           uncharacterized LOC101207451 [Cucumis sativus]
          Length = 177

 Score =  123 bits (308), Expect = 2e-26
 Identities = 64/121 (52%), Positives = 80/121 (66%), Gaps = 3/121 (2%)
 Frame = +2

Query: 206 RHSRNAPVVVSAQFDILRVLQTAWKVGKDGIEAGTDLVPASIPRPLARXXXXXXXXXXXX 385
           R S + P+V +AQ + LRV QT WK+GKDGIEAGTDLVP S+PRP+AR            
Sbjct: 57  RGSPSFPLVYAAQNNFLRVFQTVWKIGKDGIEAGTDLVPDSVPRPIARISVGIVALTIGL 116

Query: 386 XXXXXXXXTAFFVLGVMGLVYFVFIALNKDDGPRXXXXXN---VTTDDSLEEARRIMEKY 556
                   TA FVL +MG +YF+FIALNKD+GPR     +    +T+++LEEARRIMEKY
Sbjct: 117 FLFKSVLSTALFVLAMMGAIYFIFIALNKDEGPRGGGGSSSSPTSTEETLEEARRIMEKY 176

Query: 557 K 559
           K
Sbjct: 177 K 177


>ref|XP_002521134.1| conserved hypothetical protein [Ricinus communis]
           gi|223539703|gb|EEF41285.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 177

 Score =  122 bits (306), Expect = 4e-26
 Identities = 64/121 (52%), Positives = 79/121 (65%), Gaps = 1/121 (0%)
 Frame = +2

Query: 200 LQRHSRNAPVVVSAQFDILRVLQTAWKVGKDGIEAGTDLVPASIPRPLARXXXXXXXXXX 379
           + R+SR+ PV+ + Q + L+V+QTAWKVGKDGI+AGT LVP S+PRP+AR          
Sbjct: 57  ISRNSRSFPVIFAVQSNFLKVVQTAWKVGKDGIDAGTRLVPDSVPRPIARISVTIVALSV 116

Query: 380 XXXXXXXXXXTAFFVLGVMGLVYFVFIALNKDDGPRXXXXXNVT-TDDSLEEARRIMEKY 556
                     TAFF L  MG VYFVFIALNKD  P+     + T ++D LEEARRIMEKY
Sbjct: 117 SLFVLKSVLSTAFFALATMGFVYFVFIALNKDQRPKGGGTGSTTSSEDPLEEARRIMEKY 176

Query: 557 K 559
           K
Sbjct: 177 K 177


>ref|XP_002303086.1| predicted protein [Populus trichocarpa] gi|118489453|gb|ABK96529.1|
           unknown [Populus trichocarpa x Populus deltoides]
           gi|222844812|gb|EEE82359.1| predicted protein [Populus
           trichocarpa]
          Length = 172

 Score =  117 bits (293), Expect = 1e-24
 Identities = 64/119 (53%), Positives = 76/119 (63%), Gaps = 1/119 (0%)
 Frame = +2

Query: 206 RHSRNAPVVV-SAQFDILRVLQTAWKVGKDGIEAGTDLVPASIPRPLARXXXXXXXXXXX 382
           ++ R+APVVV +AQ + L+V+QT WKVGKDGIE GT+LVP S+PRP+AR           
Sbjct: 56  KNPRSAPVVVFAAQSNFLKVVQTVWKVGKDGIETGTNLVPNSVPRPIARVAVTFVVLAVS 115

Query: 383 XXXXXXXXXTAFFVLGVMGLVYFVFIALNKDDGPRXXXXXNVTTDDSLEEARRIMEKYK 559
                    T FF L  MGLVYF FIALNKD GP+       T +D  EEARRIMEKYK
Sbjct: 116 LFLLKSFLSTVFFALATMGLVYFTFIALNKDQGPK--GGGGTTLEDPEEEARRIMEKYK 172


Top