BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012226
         (714 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_004849354.1| NADH dehydrogenase subunit 4 [Cucumis sativu...    96   7e-18
gb|ABA42867.1| NADH dehydrogenase subunit 4 [Secale cereale]           96   1e-17
ref|YP_762351.1| NADH dehydrogenase subunit 4 [Sorghum bicolor] ...    96   1e-17
ref|YP_588294.1| NADH dehydrogenase subunit 4 [Zea mays subsp. m...    96   1e-17
ref|YP_002608215.2| NADH dehydrogenase subunit 4 [Carica papaya]...    94   2e-17

>ref|YP_004849354.1| NADH dehydrogenase subunit 4 [Cucumis sativus]
           gi|325305613|gb|ADZ10782.1| NADH dehydrogenase subunit 4
           [Cucumis sativus]
          Length = 495

 Score = 95.9 bits (237), Expect = 7e-18
 Identities = 45/48 (93%), Positives = 45/48 (93%)
 Frame = -1

Query: 552 MLEHFSGCYFDLSGPILCPVLGSITPLFIPNSRIRPIRLIGLCASLIT 409
           MLEHF  CYF LSGPILCPVLGSITPLFIPNSRIRPIRLIGLCASLIT
Sbjct: 1   MLEHFCSCYFSLSGPILCPVLGSITPLFIPNSRIRPIRLIGLCASLIT 48


>gb|ABA42867.1| NADH dehydrogenase subunit 4 [Secale cereale]
          Length = 139

 Score = 95.5 bits (236), Expect = 1e-17
 Identities = 45/48 (93%), Positives = 45/48 (93%)
 Frame = -1

Query: 552 MLEHFSGCYFDLSGPILCPVLGSITPLFIPNSRIRPIRLIGLCASLIT 409
           MLEHFS CYFDLSGPILCPVLGSITPLFIPNS IRPIRLIGLC SLIT
Sbjct: 1   MLEHFSECYFDLSGPILCPVLGSITPLFIPNSSIRPIRLIGLCVSLIT 48


>ref|YP_762351.1| NADH dehydrogenase subunit 4 [Sorghum bicolor]
           gi|114309665|gb|ABI60882.1| NADH dehydrogenase subunit 4
           (mitochondrion) [Sorghum bicolor]
          Length = 495

 Score = 95.5 bits (236), Expect = 1e-17
 Identities = 45/48 (93%), Positives = 45/48 (93%)
 Frame = -1

Query: 552 MLEHFSGCYFDLSGPILCPVLGSITPLFIPNSRIRPIRLIGLCASLIT 409
           MLEHFS CYFDLSGPILCPVLGSITPLFIPNS IRPIRLIGLC SLIT
Sbjct: 1   MLEHFSECYFDLSGPILCPVLGSITPLFIPNSSIRPIRLIGLCVSLIT 48


>ref|YP_588294.1| NADH dehydrogenase subunit 4 [Zea mays subsp. mays]
           gi|114151576|ref|YP_740373.1| NADH dehydrogenase subunit
           4 [Zea perennis] gi|114151608|ref|YP_740452.1| NADH
           dehydrogenase subunit 4 [Zea luxurians]
           gi|114151642|ref|YP_740400.1| NADH dehydrogenase subunit
           4 [Zea mays subsp. parviglumis]
           gi|115278614|ref|YP_762511.1| NADH dehydrogenase subunit
           4 [Tripsacum dactyloides] gi|40795152|gb|AAR91196.1|
           NADH dehydrogenase subunit 4 (mitochondrion) [Zea mays]
           gi|93116050|gb|ABE98683.1| NADH dehydrogenase subunit 4
           (mitochondrion) [Zea mays subsp. mays]
           gi|93116094|gb|ABE98726.1| NADH dehydrogenase subunit 4
           (mitochondrion) [Zea mays subsp. mays]
           gi|93116141|gb|ABE98772.1| NADH dehydrogenase subunit 4
           [Zea mays subsp. mays] gi|102567910|gb|ABF70827.1| NADH
           dehydrogenase subunit 4 (mitochondrion) [Zea perennis]
           gi|102567975|gb|ABF70859.1| NADH dehydrogenase subunit 4
           (mitochondrion) [Zea mays subsp. parviglumis]
           gi|102579643|gb|ABF70923.1| NADH dehydrogenase subunit 4
           (mitochondrion) [Zea mays subsp. mays]
           gi|110287604|gb|ABG65650.1| NADH dehydrogenase subunit 4
           (mitochondrion) [Zea luxurians]
           gi|114432105|gb|ABI74654.1| NADH dehydrogenase subunit 4
           (mitochondrion) [Tripsacum dactyloides]
          Length = 495

 Score = 95.5 bits (236), Expect = 1e-17
 Identities = 45/48 (93%), Positives = 45/48 (93%)
 Frame = -1

Query: 552 MLEHFSGCYFDLSGPILCPVLGSITPLFIPNSRIRPIRLIGLCASLIT 409
           MLEHFS CYFDLSGPILCPVLGSITPLFIPNS IRPIRLIGLC SLIT
Sbjct: 1   MLEHFSECYFDLSGPILCPVLGSITPLFIPNSSIRPIRLIGLCVSLIT 48


>ref|YP_002608215.2| NADH dehydrogenase subunit 4 [Carica papaya]
           gi|256535772|gb|ACB20504.2| NADH dehydrogenase subunit 4
           (mitochondrion) [Carica papaya]
          Length = 495

 Score = 94.4 bits (233), Expect = 2e-17
 Identities = 45/48 (93%), Positives = 45/48 (93%)
 Frame = -1

Query: 552 MLEHFSGCYFDLSGPILCPVLGSITPLFIPNSRIRPIRLIGLCASLIT 409
           MLEHF  CY DLSGPILCPVLGSITPLFIPNSRIRPIRLIGLCASLIT
Sbjct: 1   MLEHFCECYSDLSGPILCPVLGSITPLFIPNSRIRPIRLIGLCASLIT 48