BLASTX nr result

ID: Coptis24_contig00012224 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012224
         (334 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319808.1| predicted protein [Populus trichocarpa] gi|2...    58   9e-07
ref|XP_002332238.1| predicted protein [Populus trichocarpa] gi|2...    58   9e-07
ref|XP_002324798.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06
ref|XP_003551192.1| PREDICTED: uncharacterized protein LOC100784...    56   3e-06
ref|XP_003615596.1| Zinc finger MYM-type protein [Medicago trunc...    56   3e-06

>ref|XP_002319808.1| predicted protein [Populus trichocarpa] gi|222858184|gb|EEE95731.1|
           predicted protein [Populus trichocarpa]
          Length = 788

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 23/37 (62%), Positives = 31/37 (83%)
 Frame = -3

Query: 290 NRMVDEWLNDYLIIYIEKEVFDSIDTELILQRFQKMK 180
           NRM D+W+ND L++YIEK++FD ID E I++RFQ MK
Sbjct: 746 NRMGDKWMNDSLVVYIEKDIFDKIDNEAIMKRFQNMK 782


>ref|XP_002332238.1| predicted protein [Populus trichocarpa] gi|222831851|gb|EEE70328.1|
           predicted protein [Populus trichocarpa]
          Length = 120

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 23/37 (62%), Positives = 31/37 (83%)
 Frame = -3

Query: 290 NRMVDEWLNDYLIIYIEKEVFDSIDTELILQRFQKMK 180
           NRM D+W+ND L++YIEK++FD ID E I++RFQ MK
Sbjct: 78  NRMGDKWMNDSLVVYIEKDIFDKIDNETIMKRFQNMK 114


>ref|XP_002324798.1| predicted protein [Populus trichocarpa] gi|222866232|gb|EEF03363.1|
           predicted protein [Populus trichocarpa]
          Length = 120

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 23/37 (62%), Positives = 31/37 (83%)
 Frame = -3

Query: 290 NRMVDEWLNDYLIIYIEKEVFDSIDTELILQRFQKMK 180
           NRM D+W+ND LI+YIEK +FD ID E+I++RFQ +K
Sbjct: 78  NRMGDKWMNDSLIVYIEKNIFDEIDNEVIVKRFQNIK 114


>ref|XP_003551192.1| PREDICTED: uncharacterized protein LOC100784329 [Glycine max]
          Length = 428

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 24/37 (64%), Positives = 30/37 (81%)
 Frame = -3

Query: 290 NRMVDEWLNDYLIIYIEKEVFDSIDTELILQRFQKMK 180
           NRM D W+ND L+ YIEK+VF+ ID ELI+Q+FQ MK
Sbjct: 386 NRMGDAWMNDCLVTYIEKDVFNKIDNELIIQQFQNMK 422


>ref|XP_003615596.1| Zinc finger MYM-type protein [Medicago truncatula]
           gi|355516931|gb|AES98554.1| Zinc finger MYM-type protein
           [Medicago truncatula]
          Length = 892

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 24/36 (66%), Positives = 30/36 (83%)
 Frame = -3

Query: 290 NRMVDEWLNDYLIIYIEKEVFDSIDTELILQRFQKM 183
           NRM D+W+ND L+ YIE++V D ID ELI+QRFQKM
Sbjct: 850 NRMGDDWMNDCLVTYIERDVADKIDDELIIQRFQKM 885


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