BLASTX nr result
ID: Coptis24_contig00012218
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00012218 (1895 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI23263.3| unnamed protein product [Vitis vinifera] 756 0.0 ref|XP_002274688.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 756 0.0 emb|CAN76636.1| hypothetical protein VITISV_010658 [Vitis vinifera] 756 0.0 gb|EEC70450.1| hypothetical protein OsI_01481 [Oryza sativa Indi... 724 0.0 ref|NP_001059424.1| Os07g0301200 [Oryza sativa Japonica Group] g... 722 0.0 >emb|CBI23263.3| unnamed protein product [Vitis vinifera] Length = 628 Score = 756 bits (1951), Expect = 0.0 Identities = 378/471 (80%), Positives = 417/471 (88%), Gaps = 3/471 (0%) Frame = -1 Query: 1691 TEAANLKRKLKIDDPEEDDAIKKKKSGEDDVEIGGGKEVFVSGNDVKEVKYTALSSFDEA 1512 TEA K++ + + +E + ++ EDD E G V V+G D KE KY A SF E+ Sbjct: 157 TEAKKKKKEKEKKEKKEKEGEEEGLKDEDDKESRGAC-VAVTGKDAKESKYAAFKSFAES 215 Query: 1511 KLPEEVLECCKGFNKPSPIQSHAWPFLLDGRDFIGIAATGSGKTLAFGVPALMHI---RR 1341 KLP++VLECC+ F++PSPIQSHAWPFLLD RDFIGIAATGSGKTLAFGVPA+MH+ R+ Sbjct: 216 KLPDDVLECCRNFSQPSPIQSHAWPFLLDHRDFIGIAATGSGKTLAFGVPAMMHVLSKRK 275 Query: 1340 TGRKKRLNPLCLVLSPTRELAQQIADVLCEAGKSCGVSSVCVYGGTSKGPQISSLKAGVD 1161 + K +NPLCLVLSPTRELAQQI+DVLCEAGK CGV SVC+YGGTSKGPQISSLK+GVD Sbjct: 276 SKTSKGVNPLCLVLSPTRELAQQISDVLCEAGKHCGVKSVCLYGGTSKGPQISSLKSGVD 335 Query: 1160 VVIGTPGRLKDLIEMGFCCLKEVSYVVLDEADRMLDMGFEPEVRSILSQTCSIRQMVMFS 981 +VIGTPGRLKDLIEMG CCL EVS+VVLDEADRMLDMGFEPEVRSILSQTC RQMVMFS Sbjct: 336 IVIGTPGRLKDLIEMGVCCLTEVSFVVLDEADRMLDMGFEPEVRSILSQTCPARQMVMFS 395 Query: 980 ATWPPSVHQLAQEFMDPNPVKVVVGSEDLAANHDVMQIVEVLDDRSRDARLVTLLEKYHK 801 ATWP VHQLAQEFMDPNPVKVV+GSEDLAANHDVMQIVEVLDDRSRD RL+TLL KYHK Sbjct: 396 ATWPLPVHQLAQEFMDPNPVKVVIGSEDLAANHDVMQIVEVLDDRSRDERLLTLLGKYHK 455 Query: 800 SQKNRVLVFVLYKKEAARVENMLQKRGWKAVSVHGDKAQRDRTNALSLFKDGICPLMVAT 621 SQ+NRVLVFVLYKKEAARVENMLQ+RGW VS+HGDKAQ+ RT ALSLFK G CPLM+AT Sbjct: 456 SQRNRVLVFVLYKKEAARVENMLQRRGWNVVSIHGDKAQQARTAALSLFKKGSCPLMIAT 515 Query: 620 DVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFMQENKGLAGELVN 441 DVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFMQENKGLAGELVN Sbjct: 516 DVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFMQENKGLAGELVN 575 Query: 440 VLRESGQLVPTDLMKFGTHVKKKESKLYGAHFKEISADAPKSKKITFNDSD 288 VL+E+GQ+VP DL+KFGTHVKKKESKLYGAHF+EI+ADAPKSKKITF+DSD Sbjct: 576 VLKEAGQIVPADLLKFGTHVKKKESKLYGAHFREIAADAPKSKKITFDDSD 626 >ref|XP_002274688.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 5 [Vitis vinifera] Length = 549 Score = 756 bits (1951), Expect = 0.0 Identities = 378/471 (80%), Positives = 417/471 (88%), Gaps = 3/471 (0%) Frame = -1 Query: 1691 TEAANLKRKLKIDDPEEDDAIKKKKSGEDDVEIGGGKEVFVSGNDVKEVKYTALSSFDEA 1512 TEA K++ + + +E + ++ EDD E G V V+G D KE KY A SF E+ Sbjct: 78 TEAKKKKKEKEKKEKKEKEGEEEGLKDEDDKESRGAC-VAVTGKDAKESKYAAFKSFAES 136 Query: 1511 KLPEEVLECCKGFNKPSPIQSHAWPFLLDGRDFIGIAATGSGKTLAFGVPALMHI---RR 1341 KLP++VLECC+ F++PSPIQSHAWPFLLD RDFIGIAATGSGKTLAFGVPA+MH+ R+ Sbjct: 137 KLPDDVLECCRNFSQPSPIQSHAWPFLLDHRDFIGIAATGSGKTLAFGVPAMMHVLSKRK 196 Query: 1340 TGRKKRLNPLCLVLSPTRELAQQIADVLCEAGKSCGVSSVCVYGGTSKGPQISSLKAGVD 1161 + K +NPLCLVLSPTRELAQQI+DVLCEAGK CGV SVC+YGGTSKGPQISSLK+GVD Sbjct: 197 SKTSKGVNPLCLVLSPTRELAQQISDVLCEAGKHCGVKSVCLYGGTSKGPQISSLKSGVD 256 Query: 1160 VVIGTPGRLKDLIEMGFCCLKEVSYVVLDEADRMLDMGFEPEVRSILSQTCSIRQMVMFS 981 +VIGTPGRLKDLIEMG CCL EVS+VVLDEADRMLDMGFEPEVRSILSQTC RQMVMFS Sbjct: 257 IVIGTPGRLKDLIEMGVCCLTEVSFVVLDEADRMLDMGFEPEVRSILSQTCPARQMVMFS 316 Query: 980 ATWPPSVHQLAQEFMDPNPVKVVVGSEDLAANHDVMQIVEVLDDRSRDARLVTLLEKYHK 801 ATWP VHQLAQEFMDPNPVKVV+GSEDLAANHDVMQIVEVLDDRSRD RL+TLL KYHK Sbjct: 317 ATWPLPVHQLAQEFMDPNPVKVVIGSEDLAANHDVMQIVEVLDDRSRDERLLTLLGKYHK 376 Query: 800 SQKNRVLVFVLYKKEAARVENMLQKRGWKAVSVHGDKAQRDRTNALSLFKDGICPLMVAT 621 SQ+NRVLVFVLYKKEAARVENMLQ+RGW VS+HGDKAQ+ RT ALSLFK G CPLM+AT Sbjct: 377 SQRNRVLVFVLYKKEAARVENMLQRRGWNVVSIHGDKAQQARTAALSLFKKGSCPLMIAT 436 Query: 620 DVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFMQENKGLAGELVN 441 DVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFMQENKGLAGELVN Sbjct: 437 DVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFMQENKGLAGELVN 496 Query: 440 VLRESGQLVPTDLMKFGTHVKKKESKLYGAHFKEISADAPKSKKITFNDSD 288 VL+E+GQ+VP DL+KFGTHVKKKESKLYGAHF+EI+ADAPKSKKITF+DSD Sbjct: 497 VLKEAGQIVPADLLKFGTHVKKKESKLYGAHFREIAADAPKSKKITFDDSD 547 >emb|CAN76636.1| hypothetical protein VITISV_010658 [Vitis vinifera] Length = 539 Score = 756 bits (1951), Expect = 0.0 Identities = 378/471 (80%), Positives = 417/471 (88%), Gaps = 3/471 (0%) Frame = -1 Query: 1691 TEAANLKRKLKIDDPEEDDAIKKKKSGEDDVEIGGGKEVFVSGNDVKEVKYTALSSFDEA 1512 TEA K++ + + +E + ++ EDD E G V V+G D KE KY A SF E+ Sbjct: 68 TEAKKKKKEKEKKEKKEKEGEEEGLKDEDDKESRGAC-VAVTGKDAKESKYAAFKSFAES 126 Query: 1511 KLPEEVLECCKGFNKPSPIQSHAWPFLLDGRDFIGIAATGSGKTLAFGVPALMHI---RR 1341 KLP++VLECC+ F++PSPIQSHAWPFLLD RDFIGIAATGSGKTLAFGVPA+MH+ R+ Sbjct: 127 KLPDDVLECCRNFSQPSPIQSHAWPFLLDHRDFIGIAATGSGKTLAFGVPAMMHVLSKRK 186 Query: 1340 TGRKKRLNPLCLVLSPTRELAQQIADVLCEAGKSCGVSSVCVYGGTSKGPQISSLKAGVD 1161 + K +NPLCLVLSPTRELAQQI+DVLCEAGK CGV SVC+YGGTSKGPQISSLK+GVD Sbjct: 187 SKTSKGVNPLCLVLSPTRELAQQISDVLCEAGKHCGVKSVCLYGGTSKGPQISSLKSGVD 246 Query: 1160 VVIGTPGRLKDLIEMGFCCLKEVSYVVLDEADRMLDMGFEPEVRSILSQTCSIRQMVMFS 981 +VIGTPGRLKDLIEMG CCL EVS+VVLDEADRMLDMGFEPEVRSILSQTC RQMVMFS Sbjct: 247 IVIGTPGRLKDLIEMGVCCLTEVSFVVLDEADRMLDMGFEPEVRSILSQTCPARQMVMFS 306 Query: 980 ATWPPSVHQLAQEFMDPNPVKVVVGSEDLAANHDVMQIVEVLDDRSRDARLVTLLEKYHK 801 ATWP VHQLAQEFMDPNPVKVV+GSEDLAANHDVMQIVEVLDDRSRD RL+TLL KYHK Sbjct: 307 ATWPLPVHQLAQEFMDPNPVKVVIGSEDLAANHDVMQIVEVLDDRSRDERLLTLLGKYHK 366 Query: 800 SQKNRVLVFVLYKKEAARVENMLQKRGWKAVSVHGDKAQRDRTNALSLFKDGICPLMVAT 621 SQ+NRVLVFVLYKKEAARVENMLQ+RGW VS+HGDKAQ+ RT ALSLFK G CPLM+AT Sbjct: 367 SQRNRVLVFVLYKKEAARVENMLQRRGWNVVSIHGDKAQQARTAALSLFKKGSCPLMIAT 426 Query: 620 DVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFMQENKGLAGELVN 441 DVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFMQENKGLAGELVN Sbjct: 427 DVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFMQENKGLAGELVN 486 Query: 440 VLRESGQLVPTDLMKFGTHVKKKESKLYGAHFKEISADAPKSKKITFNDSD 288 VL+E+GQ+VP DL+KFGTHVKKKESKLYGAHF+EI+ADAPKSKKITF+DSD Sbjct: 487 VLKEAGQIVPADLLKFGTHVKKKESKLYGAHFREIAADAPKSKKITFDDSD 537 >gb|EEC70450.1| hypothetical protein OsI_01481 [Oryza sativa Indica Group] Length = 512 Score = 724 bits (1869), Expect = 0.0 Identities = 359/454 (79%), Positives = 402/454 (88%), Gaps = 7/454 (1%) Frame = -1 Query: 1628 KKKKSGE----DDVEIGGGKEVFVSGNDVKEVKYTALSSFDEAKLPEEVLECCKGFNKPS 1461 KK+ G+ ++ E GGGK V V+G + KY LSSF LP +VL+CCKGF +PS Sbjct: 57 KKRAKGDLGQGEEAENGGGKVVAVTGKGSADAKYAPLSSFAATALPPQVLDCCKGFERPS 116 Query: 1460 PIQSHAWPFLLDGRDFIGIAATGSGKTLAFGVPALMHIRRT-GRK--KRLNPLCLVLSPT 1290 PIQ++AWP+LLDGRDFIGIAATGSGKT+AFGVPALMH+RR G K K+ P LVLSPT Sbjct: 117 PIQAYAWPYLLDGRDFIGIAATGSGKTIAFGVPALMHVRRKMGEKSAKKGVPRVLVLSPT 176 Query: 1289 RELAQQIADVLCEAGKSCGVSSVCVYGGTSKGPQISSLKAGVDVVIGTPGRLKDLIEMGF 1110 RELAQQIADVLCEAG CG+SSVC+YGGTSKGPQIS+LK+GVD+VIGTPGR+KDLIEMG Sbjct: 177 RELAQQIADVLCEAGAPCGISSVCLYGGTSKGPQISALKSGVDIVIGTPGRMKDLIEMGI 236 Query: 1109 CCLKEVSYVVLDEADRMLDMGFEPEVRSILSQTCSIRQMVMFSATWPPSVHQLAQEFMDP 930 C L +VS+VVLDEADRMLDMGFEPEVR+ILSQT S+RQMVMFSATWPP+VHQLAQEFMDP Sbjct: 237 CRLNDVSFVVLDEADRMLDMGFEPEVRAILSQTASVRQMVMFSATWPPAVHQLAQEFMDP 296 Query: 929 NPVKVVVGSEDLAANHDVMQIVEVLDDRSRDARLVTLLEKYHKSQKNRVLVFVLYKKEAA 750 NP+KVV+GSEDLAANHDVMQIVEVLDDRSRD+RLV LL+KYHK+Q+NRVLVFVLYK+EA Sbjct: 297 NPIKVVIGSEDLAANHDVMQIVEVLDDRSRDSRLVALLDKYHKAQRNRVLVFVLYKREAT 356 Query: 749 RVENMLQKRGWKAVSVHGDKAQRDRTNALSLFKDGICPLMVATDVAARGLDIPDVEVVIN 570 RVE MLQ+RGW AVSVHGDKAQ DRT ALSLFK+G CPLM+ATDVA+RGLDIPDVEVVIN Sbjct: 357 RVETMLQRRGWSAVSVHGDKAQHDRTKALSLFKEGSCPLMIATDVASRGLDIPDVEVVIN 416 Query: 569 YSFPLTTEDYVHRIGRTGRAGKKGVAHTFFMQENKGLAGELVNVLRESGQLVPTDLMKFG 390 YS+PLTTEDYVHRIGRTGRAGKKGVAHTFF QENKGLAGELVNVLRE+GQ+VP L KFG Sbjct: 417 YSYPLTTEDYVHRIGRTGRAGKKGVAHTFFTQENKGLAGELVNVLREAGQVVPPALTKFG 476 Query: 389 THVKKKESKLYGAHFKEISADAPKSKKITFNDSD 288 THVKKKES++YG+HFKEI ADAPKS KITF DSD Sbjct: 477 THVKKKESQIYGSHFKEIKADAPKSTKITFGDSD 510 >ref|NP_001059424.1| Os07g0301200 [Oryza sativa Japonica Group] gi|75325214|sp|Q6YS30.1|RH5_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 5 gi|34394349|dbj|BAC84904.1| putative RNA helicase [Oryza sativa Japonica Group] gi|113610960|dbj|BAF21338.1| Os07g0301200 [Oryza sativa Japonica Group] Length = 512 Score = 722 bits (1863), Expect = 0.0 Identities = 358/454 (78%), Positives = 401/454 (88%), Gaps = 7/454 (1%) Frame = -1 Query: 1628 KKKKSGE----DDVEIGGGKEVFVSGNDVKEVKYTALSSFDEAKLPEEVLECCKGFNKPS 1461 KK+ G+ ++ E GGGK V V+G + KY LSSF LP +VL+CCKGF +PS Sbjct: 57 KKRAKGDLGQGEEAENGGGKVVAVTGKGSADAKYAPLSSFAATALPPQVLDCCKGFERPS 116 Query: 1460 PIQSHAWPFLLDGRDFIGIAATGSGKTLAFGVPALMHIRRT-GRK--KRLNPLCLVLSPT 1290 PIQ++AWP+LLDGRDFIGIAATGSGKT+AFGVPALMH+RR G K K+ P LVLSPT Sbjct: 117 PIQAYAWPYLLDGRDFIGIAATGSGKTIAFGVPALMHVRRKMGEKSAKKGVPRVLVLSPT 176 Query: 1289 RELAQQIADVLCEAGKSCGVSSVCVYGGTSKGPQISSLKAGVDVVIGTPGRLKDLIEMGF 1110 RELAQQIADVLCEAG CG+SSVC+YGGTSKGPQIS+LK+GVD+VIGTPGR+KDLIEMG Sbjct: 177 RELAQQIADVLCEAGAPCGISSVCLYGGTSKGPQISALKSGVDIVIGTPGRMKDLIEMGI 236 Query: 1109 CCLKEVSYVVLDEADRMLDMGFEPEVRSILSQTCSIRQMVMFSATWPPSVHQLAQEFMDP 930 C L +VS+VVLDEADRMLDMGFEPEVR+ILSQT S+RQ VMFSATWPP+VHQLAQEFMDP Sbjct: 237 CRLNDVSFVVLDEADRMLDMGFEPEVRAILSQTASVRQTVMFSATWPPAVHQLAQEFMDP 296 Query: 929 NPVKVVVGSEDLAANHDVMQIVEVLDDRSRDARLVTLLEKYHKSQKNRVLVFVLYKKEAA 750 NP+KVV+GSEDLAANHDVMQIVEVLDDRSRD+RLV LL+KYHK+Q+NRVLVFVLYK+EA Sbjct: 297 NPIKVVIGSEDLAANHDVMQIVEVLDDRSRDSRLVALLDKYHKAQRNRVLVFVLYKREAT 356 Query: 749 RVENMLQKRGWKAVSVHGDKAQRDRTNALSLFKDGICPLMVATDVAARGLDIPDVEVVIN 570 RVE MLQ+RGW AVSVHGDKAQ DRT ALSLFK+G CPLM+ATDVA+RGLDIPDVEVVIN Sbjct: 357 RVETMLQRRGWSAVSVHGDKAQHDRTKALSLFKEGSCPLMIATDVASRGLDIPDVEVVIN 416 Query: 569 YSFPLTTEDYVHRIGRTGRAGKKGVAHTFFMQENKGLAGELVNVLRESGQLVPTDLMKFG 390 YS+PLTTEDYVHRIGRTGRAGKKGVAHTFF QENKGLAGELVNVLRE+GQ+VP L KFG Sbjct: 417 YSYPLTTEDYVHRIGRTGRAGKKGVAHTFFTQENKGLAGELVNVLREAGQVVPPALTKFG 476 Query: 389 THVKKKESKLYGAHFKEISADAPKSKKITFNDSD 288 THVKKKES++YG+HFKEI ADAPKS KITF DSD Sbjct: 477 THVKKKESQIYGSHFKEIKADAPKSTKITFGDSD 510