BLASTX nr result
ID: Coptis24_contig00012214
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00012214 (220 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003546338.1| PREDICTED: importin subunit alpha-1-like [Gl... 105 3e-21 ref|XP_003533220.1| PREDICTED: importin subunit alpha-1-like [Gl... 105 3e-21 ref|XP_003529543.1| PREDICTED: LOW QUALITY PROTEIN: importin sub... 104 7e-21 ref|XP_002275593.1| PREDICTED: importin subunit alpha-1 [Vitis v... 104 9e-21 ref|XP_002334234.1| predicted protein [Populus trichocarpa] gi|2... 103 1e-20 >ref|XP_003546338.1| PREDICTED: importin subunit alpha-1-like [Glycine max] Length = 531 Score = 105 bits (263), Expect = 3e-21 Identities = 57/82 (69%), Positives = 63/82 (76%), Gaps = 9/82 (10%) Frame = +2 Query: 2 HGALILLLAQLNEHAKLSILRNATWTISNFC--------HSLRSNRQSLHSLLLS-DEEV 154 HGALI LLAQLNEHAKLS+LRNATWT+SNFC +R+ +L L+ S DEEV Sbjct: 201 HGALIPLLAQLNEHAKLSMLRNATWTLSNFCRGKPQPPFEQVRAALPALERLVFSNDEEV 260 Query: 155 LTDACWALSYLFDGTNDKIQAV 220 LTDACWALSYL DGTNDKIQAV Sbjct: 261 LTDACWALSYLSDGTNDKIQAV 282 >ref|XP_003533220.1| PREDICTED: importin subunit alpha-1-like [Glycine max] Length = 531 Score = 105 bits (263), Expect = 3e-21 Identities = 57/82 (69%), Positives = 63/82 (76%), Gaps = 9/82 (10%) Frame = +2 Query: 2 HGALILLLAQLNEHAKLSILRNATWTISNFC--------HSLRSNRQSLHSLLLS-DEEV 154 HGALI LLAQLNEHAKLS+LRNATWT+SNFC +R+ +L L+ S DEEV Sbjct: 201 HGALIPLLAQLNEHAKLSMLRNATWTLSNFCRGKPQPPFEQVRAALPALERLVFSNDEEV 260 Query: 155 LTDACWALSYLFDGTNDKIQAV 220 LTDACWALSYL DGTNDKIQAV Sbjct: 261 LTDACWALSYLSDGTNDKIQAV 282 >ref|XP_003529543.1| PREDICTED: LOW QUALITY PROTEIN: importin subunit alpha-1-like [Glycine max] Length = 530 Score = 104 bits (260), Expect = 7e-21 Identities = 56/82 (68%), Positives = 62/82 (75%), Gaps = 9/82 (10%) Frame = +2 Query: 2 HGALILLLAQLNEHAKLSILRNATWTISNFC--------HSLRSNRQSLHSLLLS-DEEV 154 HGAL+ LLAQLNEHAKLS+LRNATWT+SNFC +R +L L+ S DEEV Sbjct: 200 HGALVPLLAQLNEHAKLSMLRNATWTLSNFCRGKPQPPFEQVRPALPALERLVFSNDEEV 259 Query: 155 LTDACWALSYLFDGTNDKIQAV 220 LTDACWALSYL DGTNDKIQAV Sbjct: 260 LTDACWALSYLSDGTNDKIQAV 281 >ref|XP_002275593.1| PREDICTED: importin subunit alpha-1 [Vitis vinifera] gi|296083287|emb|CBI22923.3| unnamed protein product [Vitis vinifera] Length = 529 Score = 104 bits (259), Expect = 9e-21 Identities = 57/85 (67%), Positives = 63/85 (74%), Gaps = 12/85 (14%) Frame = +2 Query: 2 HGALILLLAQLNEHAKLSILRNATWTISNFCH------------SLRSNRQSLHSLLLSD 145 HGALI LLAQLNEHAKLS+LRNATWT+SNFC +L + + +HS SD Sbjct: 199 HGALIPLLAQLNEHAKLSMLRNATWTLSNFCRGKPQPPFDQVKPALPALERLVHS---SD 255 Query: 146 EEVLTDACWALSYLFDGTNDKIQAV 220 EEVLTDACWALSYL DGTNDKIQAV Sbjct: 256 EEVLTDACWALSYLSDGTNDKIQAV 280 >ref|XP_002334234.1| predicted protein [Populus trichocarpa] gi|222870218|gb|EEF07349.1| predicted protein [Populus trichocarpa] Length = 383 Score = 103 bits (258), Expect = 1e-20 Identities = 57/82 (69%), Positives = 62/82 (75%), Gaps = 9/82 (10%) Frame = +2 Query: 2 HGALILLLAQLNEHAKLSILRNATWTISNFC--------HSLRSNRQSLHSLLLS-DEEV 154 HGALI LLAQLNEHAKLS+LRNATWT+SNFC +R +L L+ S DEEV Sbjct: 200 HGALIPLLAQLNEHAKLSMLRNATWTLSNFCRGKPQPLFEKVRPALPALERLVHSTDEEV 259 Query: 155 LTDACWALSYLFDGTNDKIQAV 220 LTDACWALSYL DGTNDKIQAV Sbjct: 260 LTDACWALSYLSDGTNDKIQAV 281