BLASTX nr result

ID: Coptis24_contig00012212 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012212
         (1298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301183.1| predicted protein [Populus trichocarpa] gi|2...   117   5e-24
emb|CBI19516.3| unnamed protein product [Vitis vinifera]              112   2e-22
emb|CAN75496.1| hypothetical protein VITISV_040890 [Vitis vinifera]   105   2e-20
ref|XP_002327142.1| predicted protein [Populus trichocarpa] gi|2...   103   1e-19
ref|XP_003550338.1| PREDICTED: uncharacterized protein LOC100814...    92   4e-16

>ref|XP_002301183.1| predicted protein [Populus trichocarpa] gi|222842909|gb|EEE80456.1|
            predicted protein [Populus trichocarpa]
          Length = 256

 Score =  117 bits (294), Expect = 5e-24
 Identities = 92/233 (39%), Positives = 123/233 (52%), Gaps = 11/233 (4%)
 Frame = -2

Query: 1273 SGMSGLCDQE--EVSSSVNRIEESLSTAWTDEKHSLYLDSMEASFVKQLYNHEYNAIDLL 1100
            S  SGL   E  E++   + + ES+S+ WTDEKH LYL SMEASFV QL    YN+IDLL
Sbjct: 16   SETSGLTGHESVELAQQDSPMIESMSSEWTDEKHKLYLKSMEASFVNQL----YNSIDLL 71

Query: 1099 GWRSRR-KNQPXXXXXXXXXXXXXSGQFKVLQIRSWKKINFGGAQHGLEFTKESHLNQEN 923
            GWRS++ +  P             SGQFKVL+   W+KINF   +  L   K+S     +
Sbjct: 72   GWRSQKGRPVPNLSGEVNCSTCRPSGQFKVLRRGGWQKINFRRHESQLSSAKDSRGYLTS 131

Query: 922  PRL-HLRSVKQLQEATMVNLSKSGAPCRKLSNAGRHSRL--PSESPAFP----SESC-QN 767
            P +      ++ + AT   L +     R ++   + + L  P+ +        S SC ++
Sbjct: 132  PWIQQFTPARKPEGATSPALQECAIQSRGINLKWKKAVLCCPATNSKLSHFGNSFSCHRD 191

Query: 766  FVFSYKEMSGQNFVDEAKEPEHSRRLCKTKRLKTLSEIASRKDQVVPVIISPV 608
            FV S  EMSGQNFVDE  E E +     +KRLKTL    S  DQVVP   +PV
Sbjct: 192  FVESNTEMSGQNFVDEDIESESASSSFSSKRLKTLKTDPSSSDQVVPHSKTPV 244


>emb|CBI19516.3| unnamed protein product [Vitis vinifera]
          Length = 255

 Score =  112 bits (280), Expect = 2e-22
 Identities = 81/220 (36%), Positives = 115/220 (52%), Gaps = 11/220 (5%)
 Frame = -2

Query: 1252 DQEEVSSSVNRIEESLSTAWTDEKHSLYLDSMEASFVKQLYNHEYNAIDLLGWRSRRKN- 1076
            DQEE SS  + + E +S  WTDEKHSLYL SMEASFV QL    YN++ LLGW S+++N 
Sbjct: 22   DQEETSSLDSPVTEPMSMEWTDEKHSLYLKSMEASFVDQL----YNSLGLLGWHSQKENP 77

Query: 1075 -QPXXXXXXXXXXXXXSGQFKVLQIRSWKKINFGGAQHGLEFTKESHLNQENPRL-HLRS 902
                            SGQFKVL+   W+KINF  A+  +     SH+   NP + H RS
Sbjct: 78   SDSKPSLQMLCKTRNSSGQFKVLRGGFWQKINFERARKQMVKADGSHVLLANPWIQHFRS 137

Query: 901  VKQLQEATMVNLSKSGAPCRK-LSNAGRHSR---LPSESPAFPSESC----QNFVFSYKE 746
              + +   +    ++G+  RK + + G+ +    L + S  FP   C    ++ + +  E
Sbjct: 138  ACRDETVVLPAPQENGSSTRKAVPSRGKKASPCGLATTSKQFPMYHCHLRQRDSLSTNTE 197

Query: 745  MSGQNFVDEAKEPEHSRRLCKTKRLKTLSEIASRKDQVVP 626
            +S QNF+D+  E      L   KR+KT+       DQVVP
Sbjct: 198  VSDQNFLDDDVEGGRENSLVSAKRMKTIVVDTCVNDQVVP 237


>emb|CAN75496.1| hypothetical protein VITISV_040890 [Vitis vinifera]
          Length = 467

 Score =  105 bits (263), Expect = 2e-20
 Identities = 79/220 (35%), Positives = 114/220 (51%), Gaps = 16/220 (7%)
 Frame = -2

Query: 1273 SGMSG-----LCDQEEVSSSVNRIEESLSTAWTDEKHSLYLDSMEASFVKQLYNHEYNAI 1109
            SG++G       DQEE SS  + + E +S  WTDEKHSLYL SMEASFV QL    YN+ 
Sbjct: 10   SGLTGGDSTXXVDQEETSSLDSPVTEPMSMEWTDEKHSLYLKSMEASFVDQL----YNSX 65

Query: 1108 DLLGWRSRRKN--QPXXXXXXXXXXXXXSGQFKVLQIRSWKKINFGGAQHGLEFTKESHL 935
             LLGW S+++N                 SGQFKVL+   W+KINF  A+  +     SH+
Sbjct: 66   GLLGWHSQKENPSDSKPSLQMLCKTRNSSGQFKVLRGGFWQKINFERARKQMVKADGSHV 125

Query: 934  NQENPRL-HLRSVKQLQEATMVNLSKSGAPCRK-LSNAGRHSR---LPSESPAFPSESC- 773
               NP + H RS  + +   +    ++G+  RK + + G+ +    L + S  FP   C 
Sbjct: 126  LLANPWIQHFRSACRDETVVLPAPQENGSSTRKAVPSRGKKASPCGLATTSKQFPMYHCH 185

Query: 772  ---QNFVFSYKEMSGQNFVDEAKEPEHSRRLCKTKRLKTL 662
               ++ + +  E+S QNF+D+  E      L   KR+KT+
Sbjct: 186  LRQRDSLSTNTEVSDQNFLDDDVEGGRENSLVSAKRMKTI 225


>ref|XP_002327142.1| predicted protein [Populus trichocarpa] gi|222835457|gb|EEE73892.1|
            predicted protein [Populus trichocarpa]
          Length = 254

 Score =  103 bits (257), Expect = 1e-19
 Identities = 75/217 (34%), Positives = 111/217 (51%), Gaps = 11/217 (5%)
 Frame = -2

Query: 1243 EVSSSVNRIEESLSTAWTDEKHSLYLDSMEASFVKQLYNHEYNAIDLLGWRSRRKNQ-PX 1067
            E++   + +  S+++ WTDEKH+LYL SMEASFV QL    +N++DLLGWRS ++   P 
Sbjct: 25   ELAQQDSPVIASMASEWTDEKHNLYLKSMEASFVNQL----HNSMDLLGWRSLKEGSVPN 80

Query: 1066 XXXXXXXXXXXXSGQFKVLQIRSWKKINFGGAQHGLEFTKESHLNQENPRL-HLRSVKQL 890
                        SG+FKV +  +W+KINF   +  +   KES     +P + H  S ++ 
Sbjct: 81   LSREVNCRTCTPSGEFKVHRRGNWQKINFRRPESQISSAKESRGFLTSPWIQHFTSARKP 140

Query: 889  QEATMVNLSKSGAPCRKLSNAGRHSRLPSESPAFPSESC---------QNFVFSYKEMSG 737
            ++     L +     R   + G+ + L    PA  S+            + V S  EMS 
Sbjct: 141  EDVASPTLQECANQSRATISNGKKAMLC--CPAISSKHYHLSNSFSYHHDLVDSNTEMSD 198

Query: 736  QNFVDEAKEPEHSRRLCKTKRLKTLSEIASRKDQVVP 626
            QNFVDE  + E +     +K++KTL   AS  DQVVP
Sbjct: 199  QNFVDEDIKGEKASSSLSSKKMKTLKTDASGSDQVVP 235


>ref|XP_003550338.1| PREDICTED: uncharacterized protein LOC100814610 [Glycine max]
          Length = 226

 Score = 91.7 bits (226), Expect = 4e-16
 Identities = 70/217 (32%), Positives = 104/217 (47%), Gaps = 8/217 (3%)
 Frame = -2

Query: 1252 DQEEVSSSVNRIEESLSTA---WTDEKHSLYLDSMEASFVKQLYNHEYNAIDLLGWRSRR 1082
            ++  +SS    I E+ ST    WTDEKHS+Y+ S+EASFV QLY+ +         + + 
Sbjct: 11   EKTRISSPTQGIRETESTMAPEWTDEKHSMYIKSIEASFVNQLYDSK---------QMKT 61

Query: 1081 KNQPXXXXXXXXXXXXXSGQFKVLQIRSWKKINFGGAQHGLEFTKESHLNQENPRL-HLR 905
               P              GQFKVL+   W+KINF           + H   ENP + H R
Sbjct: 62   SYDPATTS----------GQFKVLRGGCWQKINFERVNPQTSRINQCHDLTENPWIQHYR 111

Query: 904  SVKQLQEATMVNLSKSGAPCRKLSNAGRHSRLPSESPAF---PSESC-QNFVFSYKEMSG 737
            S  + +   + +L +S     K+ + G+   +PS S       S  C ++ ++S  EMS 
Sbjct: 112  SSSKQRSIAVSSLQESVTTTSKVVDLGQRKGVPSGSGHLHLCESRVCHKDMLYSDTEMSD 171

Query: 736  QNFVDEAKEPEHSRRLCKTKRLKTLSEIASRKDQVVP 626
            QNFVDE  + +   +  K KR ++L   A   DQ+VP
Sbjct: 172  QNFVDEEVKGKKQNKKSKVKRQRSLISDAQDNDQMVP 208


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