BLASTX nr result

ID: Coptis24_contig00012211 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012211
         (1249 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273261.1| PREDICTED: myb-like protein H [Vitis vinifera]    257   4e-66
emb|CBI28292.3| unnamed protein product [Vitis vinifera]              256   8e-66
ref|XP_002523835.1| DNA binding protein, putative [Ricinus commu...   244   4e-62
ref|NP_001237360.1| syringolide-induced protein 1-3-1A [Glycine ...   242   2e-61
ref|XP_004140910.1| PREDICTED: transcription factor DIVARICATA-l...   240   5e-61

>ref|XP_002273261.1| PREDICTED: myb-like protein H [Vitis vinifera]
          Length = 224

 Score =  257 bits (657), Expect = 4e-66
 Identities = 125/190 (65%), Positives = 153/190 (80%), Gaps = 4/190 (2%)
 Frame = -3

Query: 989 MLQGSLWMI----ANSSSCTTPWSREQDKLFEQALVIFPEETGNRWQRIADAVPGKTAWE 822
           M     WM+    + S S ++ WSR QDKLFE+ALV+ PEET +RW +IA  VPGK++ E
Sbjct: 1   MFPNDSWMMMVNQSPSPSSSSSWSRHQDKLFERALVVIPEETPDRWDKIAAQVPGKSSSE 60

Query: 821 VKQHYEELVHDVSEIDSGRVELPCYADDSLEMSWESESSKREISFGSGSKSKQTESERKK 642
           V++HYE+LVHDV+EIDSGRVELP Y D+S    W S+S   ++SF    + +Q+ESERKK
Sbjct: 61  VRRHYEDLVHDVAEIDSGRVELPLYEDESCGSPWASDSRAGQVSFSP--RPRQSESERKK 118

Query: 641 GTPWTEDEHKLFLIGLQKYGKGDWRSISRNAVVSRTPTQVASHAQKYYLRLNSGKKDKRR 462
           G PWTE+EH+LFLIGLQ+YGKGDWRSISRNAVVSRTPTQVASHAQKY++RL SGKKDK+R
Sbjct: 119 GVPWTEEEHRLFLIGLQRYGKGDWRSISRNAVVSRTPTQVASHAQKYFMRLTSGKKDKKR 178

Query: 461 SSIHDITTVE 432
           SSIHDITTV+
Sbjct: 179 SSIHDITTVD 188


>emb|CBI28292.3| unnamed protein product [Vitis vinifera]
          Length = 225

 Score =  256 bits (654), Expect = 8e-66
 Identities = 122/175 (69%), Positives = 148/175 (84%)
 Frame = -3

Query: 956 SSSCTTPWSREQDKLFEQALVIFPEETGNRWQRIADAVPGKTAWEVKQHYEELVHDVSEI 777
           S S ++ WSR QDKLFE+ALV+ PEET +RW +IA  VPGK++ EV++HYE+LVHDV+EI
Sbjct: 9   SPSSSSSWSRHQDKLFERALVVIPEETPDRWDKIAAQVPGKSSSEVRRHYEDLVHDVAEI 68

Query: 776 DSGRVELPCYADDSLEMSWESESSKREISFGSGSKSKQTESERKKGTPWTEDEHKLFLIG 597
           DSGRVELP Y D+S    W S+S   ++SF    + +Q+ESERKKG PWTE+EH+LFLIG
Sbjct: 69  DSGRVELPLYEDESCGSPWASDSRAGQVSFSP--RPRQSESERKKGVPWTEEEHRLFLIG 126

Query: 596 LQKYGKGDWRSISRNAVVSRTPTQVASHAQKYYLRLNSGKKDKRRSSIHDITTVE 432
           LQ+YGKGDWRSISRNAVVSRTPTQVASHAQKY++RL SGKKDK+RSSIHDITTV+
Sbjct: 127 LQRYGKGDWRSISRNAVVSRTPTQVASHAQKYFMRLTSGKKDKKRSSIHDITTVD 181


>ref|XP_002523835.1| DNA binding protein, putative [Ricinus communis]
           gi|223536923|gb|EEF38561.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 214

 Score =  244 bits (622), Expect = 4e-62
 Identities = 128/218 (58%), Positives = 157/218 (72%), Gaps = 1/218 (0%)
 Frame = -3

Query: 953 SSCTTPWSREQDKLFEQALVIFPEETGNRWQRIADAVPGKTAWEVKQHYEELVHDVSEID 774
           +S ++ WSR +DKLFE+ALV+FPEET +RW++IA  VPGK+ ++VK+HYE+LV+DV EID
Sbjct: 4   ASPSSSWSRLEDKLFERALVVFPEETPDRWEKIASHVPGKSRFDVKEHYEDLVYDVKEID 63

Query: 773 SGRVELPCYADDSLEMSW-ESESSKREISFGSGSKSKQTESERKKGTPWTEDEHKLFLIG 597
           SGRVELP Y D    + W  +ES   ++ FGS  K K+T SER+KG PWTE+EH+LFLIG
Sbjct: 64  SGRVELPSYGDQ-FGLGWGAAESGTSQVWFGSKGKEKET-SERRKGVPWTEEEHRLFLIG 121

Query: 596 LQKYGKGDWRSISRNAVVSRTPTQVASHAQKYYLRLNSGKKDKRRSSIHDITTVEDDSVE 417
           LQ+YGKGDWRSISRNAVVSRTPTQVASHAQKY+LRLNS KK+K+R SIHDITT       
Sbjct: 122 LQRYGKGDWRSISRNAVVSRTPTQVASHAQKYFLRLNSVKKEKKRPSIHDITT-----SA 176

Query: 416 NLVAPFNIPQTTQTVRATSWFPSSPGSSGYQQEFGFPV 303
           N V P +             +P     S     FGFPV
Sbjct: 177 NSVPPQSNDHNWADYMDPKPYPDHGSPSSAFHGFGFPV 214


>ref|NP_001237360.1| syringolide-induced protein 1-3-1A [Glycine max]
           gi|19911577|dbj|BAB86892.1| syringolide-induced protein
           1-3-1A [Glycine max]
          Length = 233

 Score =  242 bits (617), Expect = 2e-61
 Identities = 127/218 (58%), Positives = 159/218 (72%), Gaps = 9/218 (4%)
 Frame = -3

Query: 941 TPWSREQDKLFEQALVIFPEETGNRWQRIADAVPGKTAWEVKQHYEELVHDVSEIDSGRV 762
           T W+R  DKLFE+AL++ PE+  +RW++IAD VPGK+A EV++HYE LVHDV EIDSGRV
Sbjct: 12  TQWTRYHDKLFERALLVVPEDLPDRWEKIADQVPGKSAVEVREHYEALVHDVFEIDSGRV 71

Query: 761 ELPCYADDSLEM---------SWESESSKREISFGSGSKSKQTESERKKGTPWTEDEHKL 609
           E+P Y DDS+ M         +W++ +   +ISFGS  K +Q E+ERKKGTPWTE+EH+L
Sbjct: 72  EVPSYVDDSVAMPPSGGAGISTWDNAN---QISFGSKLK-QQGENERKKGTPWTEEEHRL 127

Query: 608 FLIGLQKYGKGDWRSISRNAVVSRTPTQVASHAQKYYLRLNSGKKDKRRSSIHDITTVED 429
           FLIGL K+GKGDWRSISRN VV+RTPTQVASHAQKY+LR NS KK+++RSSIHDITTV+ 
Sbjct: 128 FLIGLSKFGKGDWRSISRNVVVTRTPTQVASHAQKYFLRQNSVKKERKRSSIHDITTVDS 187

Query: 428 DSVENLVAPFNIPQTTQTVRATSWFPSSPGSSGYQQEF 315
           +S     AP  I QT        W P   GS    Q++
Sbjct: 188 NS-----APMPIDQT--------WVPPPGGSLQQSQQY 212


>ref|XP_004140910.1| PREDICTED: transcription factor DIVARICATA-like [Cucumis sativus]
           gi|449524322|ref|XP_004169172.1| PREDICTED:
           transcription factor DIVARICATA-like [Cucumis sativus]
          Length = 233

 Score =  240 bits (613), Expect = 5e-61
 Identities = 131/238 (55%), Positives = 167/238 (70%), Gaps = 9/238 (3%)
 Frame = -3

Query: 989 MLQGSLWMIANSSSCTTPWSREQDKLFEQALVIFPEETGNRWQRIADAVPGKTAWEVKQH 810
           M   + W     SS  T W+R +DKLFE+ALV+ P    +RWQR+AD VPGK+  EVK H
Sbjct: 1   MFHHTRWTTMTQSS--THWTRSEDKLFEEALVVVPANLPDRWQRVADHVPGKSPREVKDH 58

Query: 809 YEELVHDVSEIDSGRVELPCYADDSLEMSWESESSKREISFGSGSKSKQTESERKKGTPW 630
           Y+ LVHDV EIDSGRVELP YAD+S     E +SS  +ISFGS +K    ++ERKKGTPW
Sbjct: 59  YDALVHDVLEIDSGRVELPSYADESAVGLPEWDSSG-QISFGSKAKHGG-DNERKKGTPW 116

Query: 629 TEDEHKLFLIGLQKYGKGDWRSISRNAVVSRTPTQVASHAQKYYLRLNSGKKDKRRSSIH 450
           TE+EH+LFL+GL+K+GKGDWRSISRN V++RTPTQVASHAQKY+LR  SGKK+++RSSIH
Sbjct: 117 TEEEHRLFLLGLKKFGKGDWRSISRNVVITRTPTQVASHAQKYFLRQTSGKKERKRSSIH 176

Query: 449 DITTVEDDSV-----ENLVAPF----NIPQTTQTVRATSWFPSSPGSSGYQQEFGFPV 303
           DITTV+++S+      N ++P      I  T Q +  TS       S G+ Q + FP+
Sbjct: 177 DITTVDNNSIPMPIDPNWISPAPNNPTIQSTMQQLSPTSHGQDQGASLGF-QNYRFPM 233


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