BLASTX nr result

ID: Coptis24_contig00012209 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012209
         (524 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282888.1| PREDICTED: parafibromin-like [Vitis vinifera]     149   4e-40
emb|CBI26279.3| unnamed protein product [Vitis vinifera]              149   4e-40
ref|XP_004134132.1| PREDICTED: parafibromin-like [Cucumis sativu...   138   4e-37
ref|XP_003537641.1| PREDICTED: parafibromin-like [Glycine max]        117   4e-29
ref|XP_002517109.1| conserved hypothetical protein [Ricinus comm...   117   6e-29

>ref|XP_002282888.1| PREDICTED: parafibromin-like [Vitis vinifera]
          Length = 413

 Score =  149 bits (376), Expect(2) = 4e-40
 Identities = 70/80 (87%), Positives = 74/80 (92%)
 Frame = +3

Query: 285 DEFRFGSDYIFPCSAETAYRSKQGNLYTLETLVYYVNNHSVKHTEYLQNARLQKLPAVTL 464
           DEFRFGSDY FPCSAETAYRSKQGNLYTLETLVYYV NH +KHTEYLQ+AR Q++PAVTL
Sbjct: 24  DEFRFGSDYTFPCSAETAYRSKQGNLYTLETLVYYVKNHHIKHTEYLQSARTQRIPAVTL 83

Query: 465 PDRKPLLEYLQGKVLSNDAI 524
           PDRKPLLEYLQGKV S DAI
Sbjct: 84  PDRKPLLEYLQGKVASTDAI 103



 Score = 40.8 bits (94), Expect(2) = 4e-40
 Identities = 18/21 (85%), Positives = 20/21 (95%)
 Frame = +1

Query: 148 MDPLSALRDLTIRGELDKIVK 210
           MDPLSALRD T+RGELDKIV+
Sbjct: 1   MDPLSALRDFTVRGELDKIVR 21


>emb|CBI26279.3| unnamed protein product [Vitis vinifera]
          Length = 312

 Score =  149 bits (376), Expect(2) = 4e-40
 Identities = 70/80 (87%), Positives = 74/80 (92%)
 Frame = +3

Query: 285 DEFRFGSDYIFPCSAETAYRSKQGNLYTLETLVYYVNNHSVKHTEYLQNARLQKLPAVTL 464
           DEFRFGSDY FPCSAETAYRSKQGNLYTLETLVYYV NH +KHTEYLQ+AR Q++PAVTL
Sbjct: 24  DEFRFGSDYTFPCSAETAYRSKQGNLYTLETLVYYVKNHHIKHTEYLQSARTQRIPAVTL 83

Query: 465 PDRKPLLEYLQGKVLSNDAI 524
           PDRKPLLEYLQGKV S DAI
Sbjct: 84  PDRKPLLEYLQGKVASTDAI 103



 Score = 40.8 bits (94), Expect(2) = 4e-40
 Identities = 18/21 (85%), Positives = 20/21 (95%)
 Frame = +1

Query: 148 MDPLSALRDLTIRGELDKIVK 210
           MDPLSALRD T+RGELDKIV+
Sbjct: 1   MDPLSALRDFTVRGELDKIVR 21


>ref|XP_004134132.1| PREDICTED: parafibromin-like [Cucumis sativus]
           gi|449513423|ref|XP_004164322.1| PREDICTED:
           parafibromin-like [Cucumis sativus]
          Length = 407

 Score =  138 bits (348), Expect(2) = 4e-37
 Identities = 65/81 (80%), Positives = 70/81 (86%)
 Frame = +3

Query: 282 NDEFRFGSDYIFPCSAETAYRSKQGNLYTLETLVYYVNNHSVKHTEYLQNARLQKLPAVT 461
           NDEFRF SDY FPCS ETAYRSKQGNLYTLETLVYY+ NH VKHTEYLQNAR Q + +VT
Sbjct: 23  NDEFRFASDYSFPCSVETAYRSKQGNLYTLETLVYYIKNHHVKHTEYLQNARTQGITSVT 82

Query: 462 LPDRKPLLEYLQGKVLSNDAI 524
            PDRKPLL+YL GKV S+DAI
Sbjct: 83  FPDRKPLLDYLTGKVSSSDAI 103



 Score = 41.2 bits (95), Expect(2) = 4e-37
 Identities = 19/21 (90%), Positives = 20/21 (95%)
 Frame = +1

Query: 148 MDPLSALRDLTIRGELDKIVK 210
           MDPLSALRD TIRGELDKIV+
Sbjct: 1   MDPLSALRDFTIRGELDKIVR 21


>ref|XP_003537641.1| PREDICTED: parafibromin-like [Glycine max]
          Length = 389

 Score =  117 bits (293), Expect(2) = 4e-29
 Identities = 53/81 (65%), Positives = 65/81 (80%)
 Frame = +3

Query: 282 NDEFRFGSDYIFPCSAETAYRSKQGNLYTLETLVYYVNNHSVKHTEYLQNARLQKLPAVT 461
           N EFRFG +Y FPC  ETAYRS +GN YTLETLV+Y+ NH +KHTEY+QN     +P+VT
Sbjct: 23  NAEFRFGEEYTFPCWVETAYRSTKGNRYTLETLVHYIQNHHLKHTEYIQNTFAVGIPSVT 82

Query: 462 LPDRKPLLEYLQGKVLSNDAI 524
           LPDRKPLL+YLQG + S+D+I
Sbjct: 83  LPDRKPLLQYLQGTLSSSDSI 103



 Score = 35.8 bits (81), Expect(2) = 4e-29
 Identities = 15/21 (71%), Positives = 20/21 (95%)
 Frame = +1

Query: 148 MDPLSALRDLTIRGELDKIVK 210
           MDPLSALR+ T+RGE++KIV+
Sbjct: 1   MDPLSALREFTMRGEVEKIVR 21


>ref|XP_002517109.1| conserved hypothetical protein [Ricinus communis]
           gi|223543744|gb|EEF45272.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 409

 Score =  117 bits (292), Expect(2) = 6e-29
 Identities = 54/81 (66%), Positives = 65/81 (80%)
 Frame = +3

Query: 282 NDEFRFGSDYIFPCSAETAYRSKQGNLYTLETLVYYVNNHSVKHTEYLQNARLQKLPAVT 461
           NDEFRF ++Y FPC+ +TAYRSKQGNLYTLETLVYY+ N  +K T+YLQ+AR   LPA+T
Sbjct: 23  NDEFRFSNEYTFPCNIKTAYRSKQGNLYTLETLVYYIQNSHLKFTDYLQHARAAGLPAIT 82

Query: 462 LPDRKPLLEYLQGKVLSNDAI 524
             DRKPL +YL GKV S D+I
Sbjct: 83  FIDRKPLYDYLTGKVSSTDSI 103



 Score = 35.4 bits (80), Expect(2) = 6e-29
 Identities = 15/21 (71%), Positives = 19/21 (90%)
 Frame = +1

Query: 148 MDPLSALRDLTIRGELDKIVK 210
           MDPLSALRD T+R ++DKIV+
Sbjct: 1   MDPLSALRDFTMRNDVDKIVR 21


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