BLASTX nr result

ID: Coptis24_contig00012199 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012199
         (1398 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327390.1| predicted protein [Populus trichocarpa] gi|2...   514   e-143
ref|XP_002325506.1| predicted protein [Populus trichocarpa] gi|2...   511   e-142
emb|CBI31250.3| unnamed protein product [Vitis vinifera]              508   e-141
ref|XP_002271525.1| PREDICTED: bifunctional aspartokinase/homose...   508   e-141
emb|CAN82421.1| hypothetical protein VITISV_034964 [Vitis vinifera]   508   e-141

>ref|XP_002327390.1| predicted protein [Populus trichocarpa] gi|222835760|gb|EEE74195.1|
            predicted protein [Populus trichocarpa]
          Length = 843

 Score =  514 bits (1324), Expect = e-143
 Identities = 271/375 (72%), Positives = 310/375 (82%), Gaps = 7/375 (1%)
 Frame = -2

Query: 1106 GGKTQRLVN---RIENVALFNVQGTG---VPGITGVIFAAVENSGANVILISKASSEHTV 945
            G K + LV     I+NVAL NV+GTG   VPG    IF AV++ GANVI+IS+ASSEH+V
Sbjct: 318  GQKLESLVKGFATIDNVALVNVEGTGMAGVPGTASAIFGAVKDVGANVIVISQASSEHSV 377

Query: 944  CFAVHEKDVTAVAEALDSGNHQDLPAGGLTKVQIILSCSILK-IGQKMEHSTGVGVSLLS 768
            CFAV EK+V AVAEAL S  H+ L AG L++V +I +CSIL  +GQKM  + GV  +L +
Sbjct: 378  CFAVPEKEVAAVAEALKSRFHEALNAGRLSQVAVIPNCSILAAVGQKMASTHGVSATLFN 437

Query: 767  ALEKDNINVLAIAQGYSEYDISVVLKEEDCTRALSAFYSRCFLSKTIMAMGIVGPGLIGA 588
            AL K NINV AIAQG SEY+I+VV+K  DC RAL A +SR +LSKT +AMGI+GPGLIGA
Sbjct: 438  ALAKANINVRAIAQGCSEYNITVVIKRGDCIRALRAVHSRFYLSKTTIAMGIIGPGLIGA 497

Query: 587  TLLDQLRDQAAILKEDFNIDLRVMGITSSRTMVLCDQGIDLSGWRELQKETGEMADLEKF 408
            TLLDQLRDQAA+LKEDFNIDLRVMGIT SRTM+L D GIDLS WREL K+ GE+ADLEKF
Sbjct: 498  TLLDQLRDQAAVLKEDFNIDLRVMGITGSRTMLLNDVGIDLSRWRELVKDKGEVADLEKF 557

Query: 407  TQHLHENQLSSNMVMVDCTADSNVASRYYDWLHKGIHVITPNKKANSGPLDKYLKLRSLQ 228
             QH+H N    N V+VDCTADSNVAS Y+DWL +GIHVITPNKKANSGPLD+YLKLR+LQ
Sbjct: 558  RQHVHGNHFLPNTVLVDCTADSNVASCYHDWLRRGIHVITPNKKANSGPLDQYLKLRALQ 617

Query: 227  RQSHTHYFYEATVGAGLPIINTLRGLQETGDKILRIEGVFSGTLSYIFNSFKGERAFSEV 48
            RQS+THYFYEATVGAGLPII+TLRGL ETGDKILRIEG+FSGTLSYIFN+FKG RAFS V
Sbjct: 618  RQSYTHYFYEATVGAGLPIISTLRGLLETGDKILRIEGIFSGTLSYIFNNFKGTRAFSNV 677

Query: 47   VAEAKQAGYTEPDPR 3
            VAEAKQAGYTEPDPR
Sbjct: 678  VAEAKQAGYTEPDPR 692


>ref|XP_002325506.1| predicted protein [Populus trichocarpa] gi|222862381|gb|EEE99887.1|
            predicted protein [Populus trichocarpa]
          Length = 829

 Score =  511 bits (1317), Expect = e-142
 Identities = 266/362 (73%), Positives = 305/362 (84%), Gaps = 4/362 (1%)
 Frame = -2

Query: 1076 IENVALFNVQGTG---VPGITGVIFAAVENSGANVILISKASSEHTVCFAVHEKDVTAVA 906
            I+NVAL NV+GTG   VPG    IF AV++ GANVI+IS+ASSEH+VCFAV EK+VTAVA
Sbjct: 317  IDNVALVNVEGTGMAGVPGTASAIFGAVKDVGANVIMISQASSEHSVCFAVPEKEVTAVA 376

Query: 905  EALDSGNHQDLPAGGLTKVQIILSCSILK-IGQKMEHSTGVGVSLLSALEKDNINVLAIA 729
            EAL S  H+ L AG L++V +I +CSIL  +GQKM  + GV  +L +AL K NINV AIA
Sbjct: 377  EALKSRFHEALNAGRLSQVAVIRNCSILAAVGQKMASTPGVSATLFNALAKANINVRAIA 436

Query: 728  QGYSEYDISVVLKEEDCTRALSAFYSRCFLSKTIMAMGIVGPGLIGATLLDQLRDQAAIL 549
            QG SEY+I+VV+K EDC RAL A +SR +LSKT +AMGI+GPGLIGATLLDQLRDQAA L
Sbjct: 437  QGCSEYNITVVIKREDCIRALRAVHSRFYLSKTTIAMGIIGPGLIGATLLDQLRDQAAFL 496

Query: 548  KEDFNIDLRVMGITSSRTMVLCDQGIDLSGWRELQKETGEMADLEKFTQHLHENQLSSNM 369
            KEDFNIDLRVMGIT SRTM+L D  IDLS WREL K+ GE+ADLEKFTQH+H N    N 
Sbjct: 497  KEDFNIDLRVMGITGSRTMLLSDVEIDLSKWRELVKDKGEVADLEKFTQHVHGNNFIPNT 556

Query: 368  VMVDCTADSNVASRYYDWLHKGIHVITPNKKANSGPLDKYLKLRSLQRQSHTHYFYEATV 189
            V+VDCTADS+VAS Y+DWL +GIHVITPNKKANSGPLD+Y KLR+LQRQS+THYFYEATV
Sbjct: 557  VLVDCTADSSVASCYHDWLRRGIHVITPNKKANSGPLDQYSKLRALQRQSYTHYFYEATV 616

Query: 188  GAGLPIINTLRGLQETGDKILRIEGVFSGTLSYIFNSFKGERAFSEVVAEAKQAGYTEPD 9
            GAGLPII+TLRGL ETGDKILRIEG+FSGTLSYIFN+F G RAFS+VVAEAKQAGYTEPD
Sbjct: 617  GAGLPIISTLRGLLETGDKILRIEGIFSGTLSYIFNNFIGTRAFSDVVAEAKQAGYTEPD 676

Query: 8    PR 3
            PR
Sbjct: 677  PR 678


>emb|CBI31250.3| unnamed protein product [Vitis vinifera]
          Length = 871

 Score =  508 bits (1307), Expect = e-141
 Identities = 260/362 (71%), Positives = 300/362 (82%), Gaps = 4/362 (1%)
 Frame = -2

Query: 1076 IENVALFNVQGTG---VPGITGVIFAAVENSGANVILISKASSEHTVCFAVHEKDVTAVA 906
            I+NVAL NV+GTG   VPG    IF+AV++ GANVI+IS+ASSEH+VCFAV EK+V AVA
Sbjct: 359  IDNVALINVEGTGMAGVPGTASAIFSAVKDVGANVIMISQASSEHSVCFAVPEKEVEAVA 418

Query: 905  EALDSGNHQDLPAGGLTKVQIILSCSILK-IGQKMEHSTGVGVSLLSALEKDNINVLAIA 729
            EAL S   Q L AG L++V ++ +CSIL  +GQ+M  + GV  SL SAL K NIN+ AIA
Sbjct: 419  EALQSRFRQALDAGRLSQVAVVPNCSILATVGQRMASTPGVSASLFSALAKANINIRAIA 478

Query: 728  QGYSEYDISVVLKEEDCTRALSAFYSRCFLSKTIMAMGIVGPGLIGATLLDQLRDQAAIL 549
            QG SEY+I+VV+K EDC RAL A +SR +LS+T +AMGI+GPGLIG TLLDQLRDQAA+L
Sbjct: 479  QGCSEYNITVVVKREDCIRALKAVHSRFYLSRTTIAMGIIGPGLIGGTLLDQLRDQAAVL 538

Query: 548  KEDFNIDLRVMGITSSRTMVLCDQGIDLSGWRELQKETGEMADLEKFTQHLHENQLSSNM 369
            KEDFNIDLRVMGIT SRTM+L D GIDLS WREL KE GE+ D+ KF  H+H N    N 
Sbjct: 539  KEDFNIDLRVMGITGSRTMLLSDSGIDLSRWRELIKEKGEVGDMHKFVNHVHGNHFIPNT 598

Query: 368  VMVDCTADSNVASRYYDWLHKGIHVITPNKKANSGPLDKYLKLRSLQRQSHTHYFYEATV 189
             +VDCTADSNVAS Y++WL KGIHVITPNKKANSGPLD+YLKLR+LQRQS+THYFYEATV
Sbjct: 599  ALVDCTADSNVASHYHEWLRKGIHVITPNKKANSGPLDQYLKLRALQRQSYTHYFYEATV 658

Query: 188  GAGLPIINTLRGLQETGDKILRIEGVFSGTLSYIFNSFKGERAFSEVVAEAKQAGYTEPD 9
            GAGLPII+TLRGL ETGDKILRIEG+FSGTLSYIFN+FKG R FSEVV EAKQAGYTEPD
Sbjct: 659  GAGLPIISTLRGLLETGDKILRIEGIFSGTLSYIFNNFKGTRRFSEVVMEAKQAGYTEPD 718

Query: 8    PR 3
            PR
Sbjct: 719  PR 720


>ref|XP_002271525.1| PREDICTED: bifunctional aspartokinase/homoserine dehydrogenase,
            chloroplastic-like [Vitis vinifera]
          Length = 918

 Score =  508 bits (1307), Expect = e-141
 Identities = 260/362 (71%), Positives = 300/362 (82%), Gaps = 4/362 (1%)
 Frame = -2

Query: 1076 IENVALFNVQGTG---VPGITGVIFAAVENSGANVILISKASSEHTVCFAVHEKDVTAVA 906
            I+NVAL NV+GTG   VPG    IF+AV++ GANVI+IS+ASSEH+VCFAV EK+V AVA
Sbjct: 406  IDNVALINVEGTGMAGVPGTASAIFSAVKDVGANVIMISQASSEHSVCFAVPEKEVEAVA 465

Query: 905  EALDSGNHQDLPAGGLTKVQIILSCSILK-IGQKMEHSTGVGVSLLSALEKDNINVLAIA 729
            EAL S   Q L AG L++V ++ +CSIL  +GQ+M  + GV  SL SAL K NIN+ AIA
Sbjct: 466  EALQSRFRQALDAGRLSQVAVVPNCSILATVGQRMASTPGVSASLFSALAKANINIRAIA 525

Query: 728  QGYSEYDISVVLKEEDCTRALSAFYSRCFLSKTIMAMGIVGPGLIGATLLDQLRDQAAIL 549
            QG SEY+I+VV+K EDC RAL A +SR +LS+T +AMGI+GPGLIG TLLDQLRDQAA+L
Sbjct: 526  QGCSEYNITVVVKREDCIRALKAVHSRFYLSRTTIAMGIIGPGLIGGTLLDQLRDQAAVL 585

Query: 548  KEDFNIDLRVMGITSSRTMVLCDQGIDLSGWRELQKETGEMADLEKFTQHLHENQLSSNM 369
            KEDFNIDLRVMGIT SRTM+L D GIDLS WREL KE GE+ D+ KF  H+H N    N 
Sbjct: 586  KEDFNIDLRVMGITGSRTMLLSDSGIDLSRWRELIKEKGEVGDMHKFVNHVHGNHFIPNT 645

Query: 368  VMVDCTADSNVASRYYDWLHKGIHVITPNKKANSGPLDKYLKLRSLQRQSHTHYFYEATV 189
             +VDCTADSNVAS Y++WL KGIHVITPNKKANSGPLD+YLKLR+LQRQS+THYFYEATV
Sbjct: 646  ALVDCTADSNVASHYHEWLRKGIHVITPNKKANSGPLDQYLKLRALQRQSYTHYFYEATV 705

Query: 188  GAGLPIINTLRGLQETGDKILRIEGVFSGTLSYIFNSFKGERAFSEVVAEAKQAGYTEPD 9
            GAGLPII+TLRGL ETGDKILRIEG+FSGTLSYIFN+FKG R FSEVV EAKQAGYTEPD
Sbjct: 706  GAGLPIISTLRGLLETGDKILRIEGIFSGTLSYIFNNFKGTRRFSEVVMEAKQAGYTEPD 765

Query: 8    PR 3
            PR
Sbjct: 766  PR 767


>emb|CAN82421.1| hypothetical protein VITISV_034964 [Vitis vinifera]
          Length = 841

 Score =  508 bits (1307), Expect = e-141
 Identities = 260/362 (71%), Positives = 300/362 (82%), Gaps = 4/362 (1%)
 Frame = -2

Query: 1076 IENVALFNVQGTG---VPGITGVIFAAVENSGANVILISKASSEHTVCFAVHEKDVTAVA 906
            I+NVAL NV+GTG   VPG    IF+AV++ GANVI+IS+ASSEH+VCFAV EK+V AVA
Sbjct: 329  IDNVALINVEGTGMAGVPGTASAIFSAVKDVGANVIMISQASSEHSVCFAVPEKEVEAVA 388

Query: 905  EALDSGNHQDLPAGGLTKVQIILSCSILK-IGQKMEHSTGVGVSLLSALEKDNINVLAIA 729
            EAL S   Q L AG L++V ++ +CSIL  +GQ+M  + GV  SL SAL K NIN+ AIA
Sbjct: 389  EALQSRFRQALDAGRLSQVAVVPNCSILATVGQRMASTPGVSASLFSALAKANINIRAIA 448

Query: 728  QGYSEYDISVVLKEEDCTRALSAFYSRCFLSKTIMAMGIVGPGLIGATLLDQLRDQAAIL 549
            QG SEY+I+VV+K EDC RAL A +SR +LS+T +AMGI+GPGLIG TLLDQLRDQAA+L
Sbjct: 449  QGCSEYNITVVVKREDCIRALKAVHSRFYLSRTTIAMGIIGPGLIGGTLLDQLRDQAAVL 508

Query: 548  KEDFNIDLRVMGITSSRTMVLCDQGIDLSGWRELQKETGEMADLEKFTQHLHENQLSSNM 369
            KEDFNIDLRVMGIT SRTM+L D GIDLS WREL KE GE+ D+ KF  H+H N    N 
Sbjct: 509  KEDFNIDLRVMGITGSRTMLLSDSGIDLSRWRELIKEKGEVGDMHKFVNHVHGNHFIPNT 568

Query: 368  VMVDCTADSNVASRYYDWLHKGIHVITPNKKANSGPLDKYLKLRSLQRQSHTHYFYEATV 189
             +VDCTADSNVAS Y++WL KGIHVITPNKKANSGPLD+YLKLR+LQRQS+THYFYEATV
Sbjct: 569  ALVDCTADSNVASHYHEWLRKGIHVITPNKKANSGPLDQYLKLRALQRQSYTHYFYEATV 628

Query: 188  GAGLPIINTLRGLQETGDKILRIEGVFSGTLSYIFNSFKGERAFSEVVAEAKQAGYTEPD 9
            GAGLPII+TLRGL ETGDKILRIEG+FSGTLSYIFN+FKG R FSEVV EAKQAGYTEPD
Sbjct: 629  GAGLPIISTLRGLLETGDKILRIEGIFSGTLSYIFNNFKGTRRFSEVVMEAKQAGYTEPD 688

Query: 8    PR 3
            PR
Sbjct: 689  PR 690


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