BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012197
         (998 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273840.1| PREDICTED: shikimate kinase, chloroplastic [...   284   3e-74
ref|XP_004149836.1| PREDICTED: shikimate kinase, chloroplastic-l...   279   7e-73
ref|XP_003518273.1| PREDICTED: shikimate kinase, chloroplastic [...   275   1e-71
ref|XP_002512880.1| protein with unknown function [Ricinus commu...   274   3e-71
ref|NP_001239733.1| uncharacterized protein LOC100781076 [Glycin...   267   3e-69

>ref|XP_002273840.1| PREDICTED: shikimate kinase, chloroplastic [Vitis vinifera]
           gi|296082301|emb|CBI21306.3| unnamed protein product
           [Vitis vinifera]
          Length = 305

 Score =  284 bits (726), Expect = 3e-74
 Identities = 146/228 (64%), Positives = 182/228 (79%), Gaps = 5/228 (2%)
 Frame = +3

Query: 33  VVGQDHSVALKNKAAEISSQLKGTSIFLVGINNNIKAKLGNVLADMLRYYYFDSDSLVEQ 212
           VV  D S+A+K KA EIS  LKGTSIFLVG+N+ IK  +G +LAD LRYY+FDSDSLVE+
Sbjct: 78  VVDVDLSLAVKKKAMEISPVLKGTSIFLVGMNSTIKTNVGKLLADALRYYHFDSDSLVEE 137

Query: 213 AAGGEAAAKSFREKDDKGFLESETEVLRQLSSMGRLVICTGDGAVKSSTNLSFMRHGISI 392
           A GGE+AAKS +E+D+KGF +SETEVL+QLSSMGRLV+C GDG V+SSTNL+ +RHGISI
Sbjct: 138 ACGGESAAKSLKEQDEKGFHDSETEVLKQLSSMGRLVVCAGDGLVQSSTNLALLRHGISI 197

Query: 393 WIDVPIVVLAKEVKESGNQPPPDDV-----ILNSDPSKAVAKLTELFERMRGGYATADAT 557
           WIDVPI ++AK + E G Q P  ++        +  ++  A+L  ++E M+GGYATADA+
Sbjct: 198 WIDVPIEMVAKNMIEEGVQIPVTELSTAESYSETGDNQVFAQLAVVYEEMKGGYATADAS 257

Query: 558 ISLQKVASQLGYDDTDAVTIEDMAMEAFREIEKLTRVKKMMEAAARPF 701
           +SLQKVASQLGYDD DAVT EDMAME  +EI++LTR+KKMME AARPF
Sbjct: 258 VSLQKVASQLGYDDLDAVTTEDMAMEVLKEIQRLTRLKKMMEEAARPF 305


>ref|XP_004149836.1| PREDICTED: shikimate kinase, chloroplastic-like [Cucumis sativus]
           gi|449522321|ref|XP_004168175.1| PREDICTED: shikimate
           kinase, chloroplastic-like [Cucumis sativus]
          Length = 307

 Score =  279 bits (714), Expect = 7e-73
 Identities = 136/226 (60%), Positives = 184/226 (81%)
 Frame = +3

Query: 24  DKNVVGQDHSVALKNKAAEISSQLKGTSIFLVGINNNIKAKLGNVLADMLRYYYFDSDSL 203
           +  V   D S+ +K KA +++ +LKGTSIFLVGIN++IK KLG +LAD+LRYYYFDSDSL
Sbjct: 82  EAKVTVDDLSLEVKKKAMDVAPELKGTSIFLVGINSSIKTKLGKLLADVLRYYYFDSDSL 141

Query: 204 VEQAAGGEAAAKSFREKDDKGFLESETEVLRQLSSMGRLVICTGDGAVKSSTNLSFMRHG 383
           V + +GGEAAAK +++ D+KGF   ETEVL+QLSSMGRLV+C G+GAV+SSTNL+ +RHG
Sbjct: 142 VVEVSGGEAAAKLYKQSDEKGFQAFETEVLKQLSSMGRLVVCAGNGAVQSSTNLALLRHG 201

Query: 384 ISIWIDVPIVVLAKEVKESGNQPPPDDVILNSDPSKAVAKLTELFERMRGGYATADATIS 563
           I++WID+P+ ++A+E  E  +Q P  D+  +   S+ + ++T L+++++ GYATADA IS
Sbjct: 202 ITLWIDLPLQMIAEEFAEDRSQHPVFDISTSGSYSEVLGQITSLYQKVKDGYATADALIS 261

Query: 564 LQKVASQLGYDDTDAVTIEDMAMEAFREIEKLTRVKKMMEAAARPF 701
           LQK+AS+LGYDD +AVT EDMAMEA +EIEKLTRVKKM+EAAA+PF
Sbjct: 262 LQKLASKLGYDDFNAVTTEDMAMEALKEIEKLTRVKKMIEAAAKPF 307


>ref|XP_003518273.1| PREDICTED: shikimate kinase, chloroplastic [Glycine max]
          Length = 280

 Score =  275 bits (703), Expect = 1e-71
 Identities = 138/219 (63%), Positives = 174/219 (79%)
 Frame = +3

Query: 45  DHSVALKNKAAEISSQLKGTSIFLVGINNNIKAKLGNVLADMLRYYYFDSDSLVEQAAGG 224
           D S+A+K KAAE+SS+LKGTSIFLVG+ +++K  LG +LAD LRYYYFDSDSLVE+A GG
Sbjct: 62  DSSLAVKKKAAEVSSELKGTSIFLVGLKSSLKTSLGKLLADALRYYYFDSDSLVEEAVGG 121

Query: 225 EAAAKSFREKDDKGFLESETEVLRQLSSMGRLVICTGDGAVKSSTNLSFMRHGISIWIDV 404
             AAKSFRE D+KGF ESETEVL+QLSSMGRLV+C G+G V SSTNL+ +RHGIS+WIDV
Sbjct: 122 ALAAKSFRESDEKGFYESETEVLKQLSSMGRLVVCAGNGTVTSSTNLALLRHGISLWIDV 181

Query: 405 PIVVLAKEVKESGNQPPPDDVILNSDPSKAVAKLTELFERMRGGYATADATISLQKVASQ 584
           P+  +A++V E  +Q  P ++ ++    +   +L  L+++ R GYATADA IS+QKV S+
Sbjct: 182 PLDFVARDVIEDKSQFAPSEISISGSYPEVQDELGALYDKYRVGYATADAIISVQKVVSR 241

Query: 585 LGYDDTDAVTIEDMAMEAFREIEKLTRVKKMMEAAARPF 701
           LG D+ D +T EDMA+EA REIEKLTRVKKM E AARPF
Sbjct: 242 LGCDNLDEITREDMALEALREIEKLTRVKKMQEEAARPF 280


>ref|XP_002512880.1| protein with unknown function [Ricinus communis]
           gi|223547891|gb|EEF49383.1| protein with unknown
           function [Ricinus communis]
          Length = 292

 Score =  274 bits (700), Expect = 3e-71
 Identities = 140/219 (63%), Positives = 173/219 (78%)
 Frame = +3

Query: 45  DHSVALKNKAAEISSQLKGTSIFLVGINNNIKAKLGNVLADMLRYYYFDSDSLVEQAAGG 224
           D S+ALK +AA+IS +LKGTSIFLVG+ +++K  LG +LAD LRYYYFDSDSLVE+ A G
Sbjct: 81  DSSLALKKRAADISPELKGTSIFLVGMRSSMKTSLGKLLADSLRYYYFDSDSLVEEVASG 140

Query: 225 EAAAKSFREKDDKGFLESETEVLRQLSSMGRLVICTGDGAVKSSTNLSFMRHGISIWIDV 404
            +AAKSF+E D+KGF ESETEVL+QLSSMGRLV+C GDGAV+S TNL+ +RHGIS+WIDV
Sbjct: 141 ASAAKSFKETDEKGFRESETEVLKQLSSMGRLVVCAGDGAVQSFTNLALLRHGISLWIDV 200

Query: 405 PIVVLAKEVKESGNQPPPDDVILNSDPSKAVAKLTELFERMRGGYATADATISLQKVASQ 584
           P+ ++A+ + E  +Q       L+   S+ + +L   FE MRGGYATADATISLQKVA  
Sbjct: 201 PLDMVAQAMSEESDQ-------LSGADSEELTELIATFEAMRGGYATADATISLQKVAVN 253

Query: 585 LGYDDTDAVTIEDMAMEAFREIEKLTRVKKMMEAAARPF 701
           LGYD  D+VT EDM +E  +EIEKLTRVKKM+E AARPF
Sbjct: 254 LGYDALDSVTAEDMTLEVLKEIEKLTRVKKMLEEAARPF 292


>ref|NP_001239733.1| uncharacterized protein LOC100781076 [Glycine max]
           gi|255640183|gb|ACU20382.1| unknown [Glycine max]
          Length = 289

 Score =  267 bits (683), Expect = 3e-69
 Identities = 138/217 (63%), Positives = 173/217 (79%)
 Frame = +3

Query: 51  SVALKNKAAEISSQLKGTSIFLVGINNNIKAKLGNVLADMLRYYYFDSDSLVEQAAGGEA 230
           S+A+K KAAE+SS+LKGTSIFLVG+ ++ K  LG +LAD LRYYYFDSD+LVE+A GG  
Sbjct: 75  SLAVKKKAAEVSSELKGTSIFLVGLKSSFKTSLGKLLADALRYYYFDSDNLVEEAVGGAL 134

Query: 231 AAKSFREKDDKGFLESETEVLRQLSSMGRLVICTGDGAVKSSTNLSFMRHGISIWIDVPI 410
           AAKSFRE D+KGF E ETEVL+QLSSMGRLV+C G+GAV SSTNL+ +RHGIS+WIDVP+
Sbjct: 135 AAKSFRESDEKGFYECETEVLKQLSSMGRLVVCAGNGAVTSSTNLALLRHGISLWIDVPL 194

Query: 411 VVLAKEVKESGNQPPPDDVILNSDPSKAVAKLTELFERMRGGYATADATISLQKVASQLG 590
             +A++V E  +Q  P ++ ++   S    +L  L++R R GYATADA IS+QKVAS+LG
Sbjct: 195 DFVARDVIEDQSQFAPSELSISG--SYPEDELGALYDRYRVGYATADAIISVQKVASRLG 252

Query: 591 YDDTDAVTIEDMAMEAFREIEKLTRVKKMMEAAARPF 701
            D+ D +T EDMA+EA  EIEKLTRVKKM+E AARPF
Sbjct: 253 CDNLDEITREDMALEALGEIEKLTRVKKMLEEAARPF 289