BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012188
         (381 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002536345.1| conserved hypothetical protein [Ricinus comm...   120   1e-35
ref|XP_003588351.1| Maturase [Medicago truncatula] gi|355477399|...    81   2e-22
emb|CBI39408.3| unnamed protein product [Vitis vinifera]               78   9e-13
ref|XP_002489092.1| hypothetical protein SORBIDRAFT_0088s002240 ...    66   3e-09

>ref|XP_002536345.1| conserved hypothetical protein [Ricinus communis]
           gi|223520024|gb|EEF26037.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 99

 Score =  120 bits (301), Expect(2) = 1e-35
 Identities = 56/60 (93%), Positives = 56/60 (93%)
 Frame = +3

Query: 201 KWPCCTSLPSSMGSALSFLGEYANMILMRCGALHLTFVGLPSSGACVPAFLCNKPLRPKT 380
           KWPCCTSL SSMGSAL FLGEYANMILMRCGALHLTFVGLPSSGACVPAFLCNKP R KT
Sbjct: 28  KWPCCTSLSSSMGSALFFLGEYANMILMRCGALHLTFVGLPSSGACVPAFLCNKPFRLKT 87



 Score = 54.3 bits (129), Expect(2) = 1e-35
 Identities = 24/25 (96%), Positives = 24/25 (96%)
 Frame = +2

Query: 125 RKANCLLAGSCMSGNVHVRLREKGG 199
           RKANCLLAGSCMSGNVHVR REKGG
Sbjct: 1   RKANCLLAGSCMSGNVHVRFREKGG 25


>ref|XP_003588351.1| Maturase [Medicago truncatula] gi|355477399|gb|AES58602.1| Maturase
           [Medicago truncatula]
          Length = 996

 Score = 81.3 bits (199), Expect(2) = 2e-22
 Identities = 37/39 (94%), Positives = 37/39 (94%)
 Frame = +3

Query: 201 KWPCCTSLPSSMGSALSFLGEYANMILMRCGALHLTFVG 317
           KWPCCTSL SSMGSAL FLGEYANMILMRCGALHLTFVG
Sbjct: 51  KWPCCTSLSSSMGSALFFLGEYANMILMRCGALHLTFVG 89



 Score = 49.7 bits (117), Expect(2) = 2e-22
 Identities = 22/25 (88%), Positives = 24/25 (96%)
 Frame = +2

Query: 125 RKANCLLAGSCMSGNVHVRLREKGG 199
           R+A+CL AGSCMSGNVHVRLREKGG
Sbjct: 24  READCLPAGSCMSGNVHVRLREKGG 48


>emb|CBI39408.3| unnamed protein product [Vitis vinifera]
          Length = 147

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 37/55 (67%), Positives = 43/55 (78%)
 Frame = +3

Query: 216 TSLPSSMGSALSFLGEYANMILMRCGALHLTFVGLPSSGACVPAFLCNKPLRPKT 380
           T + + + S   F  EYANMILMRCGALHLTF+GLPS GACV AFLCNKPL+ +T
Sbjct: 23  TPIFNGVCSIFIFFWEYANMILMRCGALHLTFIGLPSLGACVLAFLCNKPLQSET 77



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 27/33 (81%), Positives = 28/33 (84%), Gaps = 1/33 (3%)
 Frame = +2

Query: 158 MSGNVHVRLREKG-GEMALLYLTPVFNGVCSFF 253
           MSGNVHVRLREKG G   LLYLTP+FNGVCS F
Sbjct: 1   MSGNVHVRLREKGDGIKTLLYLTPIFNGVCSIF 33


>ref|XP_002489092.1| hypothetical protein SORBIDRAFT_0088s002240 [Sorghum bicolor]
           gi|241947412|gb|EES20557.1| hypothetical protein
           SORBIDRAFT_0088s002240 [Sorghum bicolor]
          Length = 58

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 30/35 (85%), Positives = 32/35 (91%)
 Frame = -3

Query: 193 LLAEPYVDVTAHTAPSQQAVSLPLQGMEVWMNRHQ 89
           LL EPYVDVTAHTAPSQQAVS PL+ MEVW+NRHQ
Sbjct: 10  LLTEPYVDVTAHTAPSQQAVSFPLEVMEVWINRHQ 44