BLASTX nr result

ID: Coptis24_contig00012180 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012180
         (252 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634616.1| PREDICTED: uncharacterized protein LOC100852...    89   4e-16
emb|CBI39364.3| unnamed protein product [Vitis vinifera]               89   4e-16
emb|CAN64641.1| hypothetical protein VITISV_033933 [Vitis vinifera]    82   4e-14
ref|XP_004165431.1| PREDICTED: uncharacterized protein LOC101230...    72   5e-11
ref|XP_004149525.1| PREDICTED: UPF0586 protein C9orf41 homolog [...    72   5e-11

>ref|XP_003634616.1| PREDICTED: uncharacterized protein LOC100852521 [Vitis vinifera]
          Length = 611

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 47/75 (62%), Positives = 56/75 (74%), Gaps = 1/75 (1%)
 Frame = -3

Query: 250 KCQQLRRCISVNSFFIQNMLEAFDPPLDMSQDIVIYEHEELENVPKNCL-SGERNFCSGQ 74
           K Q+LRRCISVNSFFI NML+AF+PPLDMSQD  + E+  LEN   + L SGERN C  +
Sbjct: 71  KFQRLRRCISVNSFFIFNMLQAFEPPLDMSQDTDMCENPHLENALDDHLDSGERNICPCE 130

Query: 73  SASTSGRTCFSEGDQ 29
           +ASTSGR  F + DQ
Sbjct: 131 AASTSGRISFPQSDQ 145


>emb|CBI39364.3| unnamed protein product [Vitis vinifera]
          Length = 498

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 47/75 (62%), Positives = 56/75 (74%), Gaps = 1/75 (1%)
 Frame = -3

Query: 250 KCQQLRRCISVNSFFIQNMLEAFDPPLDMSQDIVIYEHEELENVPKNCL-SGERNFCSGQ 74
           K Q+LRRCISVNSFFI NML+AF+PPLDMSQD  + E+  LEN   + L SGERN C  +
Sbjct: 71  KFQRLRRCISVNSFFIFNMLQAFEPPLDMSQDTDMCENPHLENALDDHLDSGERNICPCE 130

Query: 73  SASTSGRTCFSEGDQ 29
           +ASTSGR  F + DQ
Sbjct: 131 AASTSGRISFPQSDQ 145


>emb|CAN64641.1| hypothetical protein VITISV_033933 [Vitis vinifera]
          Length = 739

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 43/69 (62%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
 Frame = -3

Query: 232 RCISVNSFFIQNMLEAFDPPLDMSQDIVIYEHEELENVPKNCL-SGERNFCSGQSASTSG 56
           RCISVNSFFI NML+AF+PPLDMSQD  + E+  LEN   + L SGERN C  ++ASTSG
Sbjct: 213 RCISVNSFFIFNMLQAFEPPLDMSQDTDMCENPHLENALDDHLDSGERNICPCEAASTSG 272

Query: 55  RTCFSEGDQ 29
           R  F + DQ
Sbjct: 273 RISFPQSDQ 281


>ref|XP_004165431.1| PREDICTED: uncharacterized protein LOC101230370 [Cucumis sativus]
          Length = 229

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 41/87 (47%), Positives = 50/87 (57%), Gaps = 13/87 (14%)
 Frame = -3

Query: 250 KCQQLRRCISVNSFFIQNMLEAFDPPLDMSQDIVI-------YEHEEL------ENVPKN 110
           K ++LRRCIS NS+FI NML+AF+PPLDMSQD          + H++        N   N
Sbjct: 69  KFERLRRCISTNSYFIFNMLQAFEPPLDMSQDTDCCDGSYPDHAHDDQFCCRGERNANGN 128

Query: 109 CLSGERNFCSGQSASTSGRTCFSEGDQ 29
             S E N CSG+  STSGR C  E  Q
Sbjct: 129 LCSRESNVCSGEPTSTSGRMCSLESKQ 155


>ref|XP_004149525.1| PREDICTED: UPF0586 protein C9orf41 homolog [Cucumis sativus]
          Length = 492

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 41/87 (47%), Positives = 50/87 (57%), Gaps = 13/87 (14%)
 Frame = -3

Query: 250 KCQQLRRCISVNSFFIQNMLEAFDPPLDMSQDIVI-------YEHEEL------ENVPKN 110
           K ++LRRCIS NS+FI NML+AF+PPLDMSQD          + H++        N   N
Sbjct: 69  KFERLRRCISTNSYFIFNMLQAFEPPLDMSQDTDCCDGSYPDHAHDDQFCCRGERNANGN 128

Query: 109 CLSGERNFCSGQSASTSGRTCFSEGDQ 29
             S E N CSG+  STSGR C  E  Q
Sbjct: 129 LCSRESNVCSGEPTSTSGRMCSLESKQ 155


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