BLASTX nr result

ID: Coptis24_contig00012174 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012174
         (317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004146780.1| PREDICTED: uncharacterized protein LOC101215...    60   2e-07
ref|XP_002306600.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06
ref|XP_002284315.2| PREDICTED: uncharacterized protein LOC100249...    56   4e-06

>ref|XP_004146780.1| PREDICTED: uncharacterized protein LOC101215134 [Cucumis sativus]
           gi|449520817|ref|XP_004167429.1| PREDICTED:
           uncharacterized LOC101215134 [Cucumis sativus]
          Length = 119

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 35/76 (46%), Positives = 42/76 (55%)
 Frame = -1

Query: 257 YWDYVMXXXXXXXXXXXXXLSLILLAWCLAWKLVLVHVPLVQEILXXXXXXXXXXXXPTR 78
           +WDY+               SLI L W LAWKLVLVHVPLVQEI             PTR
Sbjct: 17  HWDYLNLYILRPILAILFTFSLISLGWFLAWKLVLVHVPLVQEIF-GLRKKPAKSKPPTR 75

Query: 77  RLSRFYNSIDANKLAS 30
           RLS+FY+S+++   AS
Sbjct: 76  RLSKFYDSLNSQTSAS 91


>ref|XP_002306600.1| predicted protein [Populus trichocarpa] gi|222856049|gb|EEE93596.1|
           predicted protein [Populus trichocarpa]
          Length = 91

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 32/70 (45%), Positives = 36/70 (51%)
 Frame = -1

Query: 254 WDYVMXXXXXXXXXXXXXLSLILLAWCLAWKLVLVHVPLVQEILXXXXXXXXXXXXPTRR 75
           WDY+               S I + W LAWKLVLVHVPLVQEI              TRR
Sbjct: 16  WDYLGLLILRPALAILFVTSFISIGWFLAWKLVLVHVPLVQEIF-GLRKKLTKPKPLTRR 74

Query: 74  LSRFYNSIDA 45
           +SR YN+IDA
Sbjct: 75  ISRIYNTIDA 84


>ref|XP_002284315.2| PREDICTED: uncharacterized protein LOC100249007 [Vitis vinifera]
          Length = 96

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 32/56 (57%), Positives = 35/56 (62%)
 Frame = -1

Query: 197 SLILLAWCLAWKLVLVHVPLVQEILXXXXXXXXXXXXPTRRLSRFYNSIDANKLAS 30
           S ILL W LAWKLVLVHVPLVQEI              T RLSRFY++I+A   AS
Sbjct: 41  SFILLGWLLAWKLVLVHVPLVQEIF-GLRNKSRKPKPQTGRLSRFYSNINARDRAS 95


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