BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012172
         (1246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACJ02771.1| indole-3-glycerol phosphate lyase IGL1vs2 [Consol...   364   e-106
gb|ACJ02770.1| indole-3-glycerol phosphate lyase IGL1vs1 [Consol...   361   e-105
gb|AFK33699.1| unknown [Lotus japonicus]                              362   e-104
gb|AAM65526.1| tryptophan synthase alpha chain [Arabidopsis thal...   347   e-103
ref|NP_567004.1| tryptophan synthase alpha chain [Arabidopsis th...   347   e-103

>gb|ACJ02771.1| indole-3-glycerol phosphate lyase IGL1vs2 [Consolida orientalis]
          Length = 319

 Score =  364 bits (935), Expect(2) = e-106
 Identities = 186/249 (74%), Positives = 208/249 (83%)
 Frame = -1

Query: 964 VAFIPYITAGDPDLKTTAEALKVLDSCGSDIIELGVPYSDPLADGPVIQAAATRALAKGT 785
           VAFIP+ITAGDPDL TTAEALKVLDSCGSDIIELGVPYSDPLADGPVIQAAATR LA+GT
Sbjct: 71  VAFIPFITAGDPDLSTTAEALKVLDSCGSDIIELGVPYSDPLADGPVIQAAATRVLARGT 130

Query: 784 NLNAIFSMLKEIIPQMSCPIALFTYYNPILKRGIGNFMATIKDVGVHGLVVPDVPLEETE 605
           N +AI +ML+ ++PQ+SCP+ALF+YYNPILKRGIG FM TIKDVGVHGLVVPDVPLEET 
Sbjct: 131 NFDAILAMLEGVVPQLSCPLALFSYYNPILKRGIGKFMTTIKDVGVHGLVVPDVPLEETA 190

Query: 604 ILRKEALKNEIELVXXXXXXXXTDRMKAIVEASEGFVYLXXXXXXXXXXXXXXXXXXXXX 425
           +LR+EALKN+IEL+        TDRMKAIVEASEGFVYL                     
Sbjct: 191 MLREEALKNQIELILLTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGSRASVSSRVQSLL 250

Query: 424 QEIKEASNKPVAVGFGISAPDHVKQLVGWGADGVIVGSAMVKLLGDAKSPEEGLQELEAF 245
           QEIKEASNKPVAVGFGIS P+HVKQ+ GWGADGVIVGSAMV+LL  AK+PEEGL+ELEAF
Sbjct: 251 QEIKEASNKPVAVGFGISTPEHVKQIAGWGADGVIVGSAMVELLAHAKTPEEGLKELEAF 310

Query: 244 TRSLKAALP 218
           T+SL+AA+P
Sbjct: 311 TKSLRAAIP 319



 Score = 49.7 bits (117), Expect(2) = e-106
 Identities = 33/77 (42%), Positives = 41/77 (53%), Gaps = 14/77 (18%)
 Frame = -3

Query: 1214 MAVALKPTCFLPSSNRNFNNSLPRTLSLVPV----------MASLSVTTPV----VGLSQ 1077
            MA A K TCFL SSN   N  L  +   +            MASL+V  P     V LS+
Sbjct: 1    MAAAFKSTCFLQSSNPTNNLFLRSSTQKLKTSNISTKSRISMASLAVAPPTAATAVSLSE 60

Query: 1076 TFTTLRQQGKVAFIPYI 1026
            TF  L++QG+VAFIP+I
Sbjct: 61   TFIRLKEQGRVAFIPFI 77


>gb|ACJ02770.1| indole-3-glycerol phosphate lyase IGL1vs1 [Consolida orientalis]
          Length = 319

 Score =  361 bits (927), Expect(2) = e-105
 Identities = 185/249 (74%), Positives = 207/249 (83%)
 Frame = -1

Query: 964 VAFIPYITAGDPDLKTTAEALKVLDSCGSDIIELGVPYSDPLADGPVIQAAATRALAKGT 785
           VAFIP+ITAGDPDL TTAEALKVLDSCGSDIIELGVPYSDPLADGPVIQAAATRALA+GT
Sbjct: 71  VAFIPFITAGDPDLSTTAEALKVLDSCGSDIIELGVPYSDPLADGPVIQAAATRALARGT 130

Query: 784 NLNAIFSMLKEIIPQMSCPIALFTYYNPILKRGIGNFMATIKDVGVHGLVVPDVPLEETE 605
           N +AI +ML+ ++PQ+SCP+ALF+YYNPILKRGIG FM TIKDVGVHGLVVPDVPLEET 
Sbjct: 131 NFDAILAMLEGVVPQLSCPLALFSYYNPILKRGIGKFMTTIKDVGVHGLVVPDVPLEETA 190

Query: 604 ILRKEALKNEIELVXXXXXXXXTDRMKAIVEASEGFVYLXXXXXXXXXXXXXXXXXXXXX 425
           +LR+EALKN+IEL+        TDRMKAIVEASEGFVYL                     
Sbjct: 191 MLREEALKNQIELILLTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGSRASVSSRVQSLL 250

Query: 424 QEIKEASNKPVAVGFGISAPDHVKQLVGWGADGVIVGSAMVKLLGDAKSPEEGLQELEAF 245
           QEIKE SNKPVAVGFGIS P+ VKQ+ GWGADGVIVGSAMV+LL  AK+PEEGL+ELEAF
Sbjct: 251 QEIKETSNKPVAVGFGISTPEQVKQIAGWGADGVIVGSAMVELLAHAKTPEEGLKELEAF 310

Query: 244 TRSLKAALP 218
           T+SL+AA+P
Sbjct: 311 TKSLRAAIP 319



 Score = 49.7 bits (117), Expect(2) = e-105
 Identities = 33/77 (42%), Positives = 41/77 (53%), Gaps = 14/77 (18%)
 Frame = -3

Query: 1214 MAVALKPTCFLPSSNRNFNNSLPRTLSLVPV----------MASLSVTTPV----VGLSQ 1077
            MA A K TCFL SSN   N  L  +   +            MASL+V  P     V LS+
Sbjct: 1    MAAAFKSTCFLQSSNPTNNLFLRSSTQKLKTSNISTKSRISMASLAVAPPTAATAVSLSE 60

Query: 1076 TFTTLRQQGKVAFIPYI 1026
            TF  L++QG+VAFIP+I
Sbjct: 61   TFIRLKEQGRVAFIPFI 77


>gb|AFK33699.1| unknown [Lotus japonicus]
          Length = 311

 Score =  362 bits (928), Expect(2) = e-104
 Identities = 186/249 (74%), Positives = 205/249 (82%)
 Frame = -1

Query: 964 VAFIPYITAGDPDLKTTAEALKVLDSCGSDIIELGVPYSDPLADGPVIQAAATRALAKGT 785
           VAFIPYITAGDPDL TTAEALKVLDSCGSDIIELGVPYSDPLADGPVIQAAATR+LA+GT
Sbjct: 63  VAFIPYITAGDPDLSTTAEALKVLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGT 122

Query: 784 NLNAIFSMLKEIIPQMSCPIALFTYYNPILKRGIGNFMATIKDVGVHGLVVPDVPLEETE 605
           N NAI SMLKE+ PQ+SCP+ALF+YYNPILKRG   FM+TI+D GVHGLVVPDVPLEETE
Sbjct: 123 NFNAIISMLKEVTPQLSCPVALFSYYNPILKRGTDKFMSTIRDSGVHGLVVPDVPLEETE 182

Query: 604 ILRKEALKNEIELVXXXXXXXXTDRMKAIVEASEGFVYLXXXXXXXXXXXXXXXXXXXXX 425
           ILR EA KN IELV         DRMKAIV+A+EGFVYL                     
Sbjct: 183 ILRTEAKKNGIELVLLTTPTTPIDRMKAIVDAAEGFVYLVSSVGVTGARASVSDKVQALL 242

Query: 424 QEIKEASNKPVAVGFGISAPDHVKQLVGWGADGVIVGSAMVKLLGDAKSPEEGLQELEAF 245
           QEIKEA++KPVAVGFGIS P+HV+Q+ GWGADGVIVGSAMVK+LGDAKSP+EGL+ELE F
Sbjct: 243 QEIKEATSKPVAVGFGISKPEHVEQVAGWGADGVIVGSAMVKILGDAKSPQEGLKELENF 302

Query: 244 TRSLKAALP 218
           TRSLK+ALP
Sbjct: 303 TRSLKSALP 311



 Score = 45.1 bits (105), Expect(2) = e-104
 Identities = 31/71 (43%), Positives = 42/71 (59%), Gaps = 8/71 (11%)
 Frame = -3

Query: 1214 MAVALKPTCFL----PSSNRNFNNSLPRTLSLV----PVMASLSVTTPVVGLSQTFTTLR 1059
            MA+ALK +CF     P +      S  + +  V    PV A  ++ T  VGLS+TF+ L+
Sbjct: 1    MAIALKSSCFFQVKKPEAGFPVYFSSKKAIIWVKRNTPVAAIRTMET--VGLSETFSRLK 58

Query: 1058 QQGKVAFIPYI 1026
            +QGKVAFIPYI
Sbjct: 59   KQGKVAFIPYI 69


>gb|AAM65526.1| tryptophan synthase alpha chain [Arabidopsis thaliana]
          Length = 312

 Score =  347 bits (890), Expect(2) = e-103
 Identities = 176/248 (70%), Positives = 204/248 (82%)
 Frame = -1

Query: 964 VAFIPYITAGDPDLKTTAEALKVLDSCGSDIIELGVPYSDPLADGPVIQAAATRALAKGT 785
           VAFIPYITAGDPDL TTAEALKVLD+CGSDIIELGVPYSDPLADGPVIQAAATR+L +GT
Sbjct: 64  VAFIPYITAGDPDLSTTAEALKVLDACGSDIIELGVPYSDPLADGPVIQAAATRSLERGT 123

Query: 784 NLNAIFSMLKEIIPQMSCPIALFTYYNPILKRGIGNFMATIKDVGVHGLVVPDVPLEETE 605
           NL++I  ML +++PQ+SCPI+LFTYYNPILKRG+G FM++I+ VGV GLVVPDVPLEETE
Sbjct: 124 NLDSILEMLDKVVPQISCPISLFTYYNPILKRGLGKFMSSIRAVGVQGLVVPDVPLEETE 183

Query: 604 ILRKEALKNEIELVXXXXXXXXTDRMKAIVEASEGFVYLXXXXXXXXXXXXXXXXXXXXX 425
           +LRKEAL N+IELV        T+RMK IV+ASEGF+YL                     
Sbjct: 184 MLRKEALNNDIELVLLTTPTTPTERMKRIVDASEGFIYLVSSIGVTGARSSVSGKVQSLL 243

Query: 424 QEIKEASNKPVAVGFGISAPDHVKQLVGWGADGVIVGSAMVKLLGDAKSPEEGLQELEAF 245
           ++IKEA++KPVAVGFGIS P+HVKQ+ GWGADGVIVGSAMVKLLGDAKSP EGL+ELE  
Sbjct: 244 KDIKEATDKPVAVGFGISKPEHVKQIAGWGADGVIVGSAMVKLLGDAKSPTEGLKELEKL 303

Query: 244 TRSLKAAL 221
           T+SLK+AL
Sbjct: 304 TKSLKSAL 311



 Score = 55.8 bits (133), Expect(2) = e-103
 Identities = 34/70 (48%), Positives = 42/70 (60%), Gaps = 7/70 (10%)
 Frame = -3

Query: 1214 MAVALKPTCFL---PSSNRNFNNSLPRTLSL----VPVMASLSVTTPVVGLSQTFTTLRQ 1056
            MA+A K   F    P S   F +S P   SL       MASLS ++P +GL+ TFT L++
Sbjct: 1    MAIAFKSGVFFLQSPKSQIGFRHSSPPDSSLSFKRFTPMASLSTSSPTLGLADTFTQLKK 60

Query: 1055 QGKVAFIPYI 1026
            QGKVAFIPYI
Sbjct: 61   QGKVAFIPYI 70


>ref|NP_567004.1| tryptophan synthase alpha chain [Arabidopsis thaliana]
           gi|75102736|sp|Q42529.1|TRPA2_ARATH RecName:
           Full=Tryptophan synthase alpha chain, chloroplastic;
           AltName: Full=Indole-3-glycerol-phosphate lyase,
           chloroplastic; AltName: Full=Protein
           TRYPTOPHAN-REQUIRING 3; Flags: Precursor
           gi|619753|gb|AAC49117.1| tryptophan synthase alpha chain
           [Arabidopsis thaliana] gi|7258367|emb|CAB77584.1|
           tryptophan synthase alpha chain [Arabidopsis thaliana]
           gi|108385367|gb|ABF85777.1| At3g54640 [Arabidopsis
           thaliana] gi|332645739|gb|AEE79260.1| tryptophan
           synthase alpha chain [Arabidopsis thaliana]
           gi|1585768|prf||2201482A Trp synthase:SUBUNIT=alpha
          Length = 312

 Score =  347 bits (890), Expect(2) = e-103
 Identities = 176/248 (70%), Positives = 204/248 (82%)
 Frame = -1

Query: 964 VAFIPYITAGDPDLKTTAEALKVLDSCGSDIIELGVPYSDPLADGPVIQAAATRALAKGT 785
           VAFIPYITAGDPDL TTAEALKVLD+CGSDIIELGVPYSDPLADGPVIQAAATR+L +GT
Sbjct: 64  VAFIPYITAGDPDLSTTAEALKVLDACGSDIIELGVPYSDPLADGPVIQAAATRSLERGT 123

Query: 784 NLNAIFSMLKEIIPQMSCPIALFTYYNPILKRGIGNFMATIKDVGVHGLVVPDVPLEETE 605
           NL++I  ML +++PQ+SCPI+LFTYYNPILKRG+G FM++I+ VGV GLVVPDVPLEETE
Sbjct: 124 NLDSILEMLDKVVPQISCPISLFTYYNPILKRGLGKFMSSIRAVGVQGLVVPDVPLEETE 183

Query: 604 ILRKEALKNEIELVXXXXXXXXTDRMKAIVEASEGFVYLXXXXXXXXXXXXXXXXXXXXX 425
           +LRKEAL N+IELV        T+RMK IV+ASEGF+YL                     
Sbjct: 184 MLRKEALNNDIELVLLTTPTTPTERMKLIVDASEGFIYLVSSIGVTGARSSVSGKVQSLL 243

Query: 424 QEIKEASNKPVAVGFGISAPDHVKQLVGWGADGVIVGSAMVKLLGDAKSPEEGLQELEAF 245
           ++IKEA++KPVAVGFGIS P+HVKQ+ GWGADGVIVGSAMVKLLGDAKSP EGL+ELE  
Sbjct: 244 KDIKEATDKPVAVGFGISKPEHVKQIAGWGADGVIVGSAMVKLLGDAKSPTEGLKELEKL 303

Query: 244 TRSLKAAL 221
           T+SLK+AL
Sbjct: 304 TKSLKSAL 311



 Score = 55.8 bits (133), Expect(2) = e-103
 Identities = 34/70 (48%), Positives = 42/70 (60%), Gaps = 7/70 (10%)
 Frame = -3

Query: 1214 MAVALKPTCFL---PSSNRNFNNSLPRTLSL----VPVMASLSVTTPVVGLSQTFTTLRQ 1056
            MA+A K   F    P S   F +S P   SL       MASLS ++P +GL+ TFT L++
Sbjct: 1    MAIAFKSGVFFLQSPKSQIGFRHSSPPDSSLSFKRFTPMASLSTSSPTLGLADTFTQLKK 60

Query: 1055 QGKVAFIPYI 1026
            QGKVAFIPYI
Sbjct: 61   QGKVAFIPYI 70