BLASTX nr result

ID: Coptis24_contig00012162 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012162
         (606 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326022.1| predicted protein [Populus trichocarpa] gi|2...    92   5e-17
ref|XP_004140113.1| PREDICTED: uncharacterized protein LOC101206...    91   1e-16
emb|CBI30660.3| unnamed protein product [Vitis vinifera]               87   3e-15
gb|AFK36827.1| unknown [Medicago truncatula]                           86   7e-15
ref|XP_002279581.1| PREDICTED: uncharacterized protein LOC100260...    86   7e-15

>ref|XP_002326022.1| predicted protein [Populus trichocarpa] gi|222862897|gb|EEF00404.1|
           predicted protein [Populus trichocarpa]
          Length = 77

 Score = 92.4 bits (228), Expect = 5e-17
 Identities = 42/77 (54%), Positives = 48/77 (62%)
 Frame = -2

Query: 404 MCCGEGDCRXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTLSCICPCCLCVTILVELALEL 225
           MCCG+GDCR                            L LSC+CPCCLCVT++VELALEL
Sbjct: 1   MCCGDGDCRPLGFLLGLPFAFLSLIISAVGVVIWIVGLLLSCVCPCCLCVTVIVELALEL 60

Query: 224 IKAPIHVMQWFTSKIPC 174
           IKAPIHVM+WFTS+IPC
Sbjct: 61  IKAPIHVMEWFTSQIPC 77


>ref|XP_004140113.1| PREDICTED: uncharacterized protein LOC101206994 isoform 1 [Cucumis
           sativus] gi|449444705|ref|XP_004140114.1| PREDICTED:
           uncharacterized protein LOC101206994 isoform 2 [Cucumis
           sativus] gi|449516321|ref|XP_004165195.1| PREDICTED:
           uncharacterized protein LOC101231760 [Cucumis sativus]
          Length = 77

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 41/77 (53%), Positives = 48/77 (62%)
 Frame = -2

Query: 404 MCCGEGDCRXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTLSCICPCCLCVTILVELALEL 225
           MCCG+GDCR                            LTL+CICPCCLC+T++VELALEL
Sbjct: 1   MCCGDGDCRPLGFLLGLPFAFVSLILSIIGVIIWIVGLTLTCICPCCLCLTVIVELALEL 60

Query: 224 IKAPIHVMQWFTSKIPC 174
           IKAP HVM+WFTS+IPC
Sbjct: 61  IKAPFHVMEWFTSQIPC 77


>emb|CBI30660.3| unnamed protein product [Vitis vinifera]
          Length = 598

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 44/89 (49%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
 Frame = -2

Query: 437 QKTFKTRKKENMCCGEG-DCRXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTLSCICPCCL 261
           +K  K +K E MCCG+  +CR                            L L+CICPCCL
Sbjct: 510 KKKKKKKKAEAMCCGDDCECRPLGFLLGLPFAFLSLLLSIIGVIIWIIGLALTCICPCCL 569

Query: 260 CVTILVELALELIKAPIHVMQWFTSKIPC 174
           CVTI+VELAL LIKAPIHVM+WFT+KIPC
Sbjct: 570 CVTIIVELALGLIKAPIHVMKWFTTKIPC 598


>gb|AFK36827.1| unknown [Medicago truncatula]
          Length = 77

 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 39/77 (50%), Positives = 46/77 (59%)
 Frame = -2

Query: 404 MCCGEGDCRXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTLSCICPCCLCVTILVELALEL 225
           MC   GDCR                            LTL+CICPCCLC+T++VELALEL
Sbjct: 1   MCNSNGDCRPLGFLLGLPFAFLCLLISIIGLIVWIVGLTLTCICPCCLCLTVIVELALEL 60

Query: 224 IKAPIHVMQWFTSKIPC 174
           +KAP+HVM+WFTSKIPC
Sbjct: 61  VKAPLHVMEWFTSKIPC 77


>ref|XP_002279581.1| PREDICTED: uncharacterized protein LOC100260766 [Vitis vinifera]
           gi|302143391|emb|CBI21952.3| unnamed protein product
           [Vitis vinifera]
          Length = 76

 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 42/77 (54%), Positives = 47/77 (61%)
 Frame = -2

Query: 404 MCCGEGDCRXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTLSCICPCCLCVTILVELALEL 225
           MCC +GDCR                            L L+CICPCCLCVT+LVELALEL
Sbjct: 1   MCC-DGDCRPLGFLLGLPFAFLSLLISIIGVVIWIVGLLLTCICPCCLCVTVLVELALEL 59

Query: 224 IKAPIHVMQWFTSKIPC 174
           IKAPIHVM+WFTS+IPC
Sbjct: 60  IKAPIHVMEWFTSQIPC 76


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