BLASTX nr result

ID: Coptis24_contig00012151 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012151
         (1182 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24880.3| unnamed protein product [Vitis vinifera]              157   4e-36
ref|XP_004161414.1| PREDICTED: LOW QUALITY PROTEIN: telomerase r...   147   4e-33
ref|XP_004149615.1| PREDICTED: telomerase reverse transcriptase-...   147   4e-33
gb|ACG63772.1| telomerase reverse transcriptase [Carica papaya]       132   1e-28
ref|XP_003532879.1| PREDICTED: telomerase reverse transcriptase-...   132   2e-28

>emb|CBI24880.3| unnamed protein product [Vitis vinifera]
          Length = 1108

 Score =  157 bits (398), Expect = 4e-36
 Identities = 84/160 (52%), Positives = 103/160 (64%)
 Frame = -2

Query: 1166 SYLLRRDDPSDYKKLLTESYAVVSDNAPPLSFFYSGCRWSQQQIVKRIIEMSKMTMHDVQ 987
            SYLLR  DP DY+KLL+E + VVS NAPPLS  Y   RWSQ QIV++ IEM    M +  
Sbjct: 58   SYLLRPQDPCDYRKLLSECFVVVSYNAPPLSTIYLDRRWSQLQIVRKTIEM---IMCEQP 114

Query: 986  VSPNAICSGYNKCSQSSKVVDLLTTSAWSLFQERIGDDVMVHLLKFVSIFLPVEHGDHHQ 807
             S N +C GY+KC+  S +V+LLT+SAW L  ER+GDD+MV+LLK  SIFLP+ H  H Q
Sbjct: 115  GSSNVLCGGYSKCNNLSSIVELLTSSAWGLLLERVGDDIMVYLLKHTSIFLPLPHKMHCQ 174

Query: 806  VSGFPISDFCSKFSKDINAPAFQHPLPDSSELSKKKRKND 687
            V+G PISD C   SK I+    Q P        KK  +ND
Sbjct: 175  VAGPPISDLCIGLSKHISDSKHQKPSLTDLGPQKKMERND 214


>ref|XP_004161414.1| PREDICTED: LOW QUALITY PROTEIN: telomerase reverse transcriptase-like
            [Cucumis sativus]
          Length = 1146

 Score =  147 bits (372), Expect = 4e-33
 Identities = 97/256 (37%), Positives = 138/256 (53%), Gaps = 1/256 (0%)
 Frame = -2

Query: 1163 YLLRRDDPSDYKKLLTESYAVVSDNAPPLSFFYSGCRWSQQQIVKRIIEMSKMTMHDVQV 984
            +LLR DDPS Y++LLT+ Y V+SD A P+S F +  RWSQ+QIV R I+M   T     V
Sbjct: 53   FLLRPDDPSHYRQLLTQCYVVISDKASPVSDFSNESRWSQRQIVVRCIQMLISTQ---PV 109

Query: 983  SPNAICSGYNKCSQSSKVVDLLTTSAWSLFQERIGDDVMVHLLKFVSIFLPVEHGDHHQV 804
              N IC G+N  + SS +VDLLT  AW L   R+ D++M++LL   SIFLP     HHQV
Sbjct: 110  DSNLICCGFNTLALSSPIVDLLTCPAWDLLLSRVRDEMMIYLLMNSSIFLPTSRKRHHQV 169

Query: 803  SGFPISDFCSKFSKDINAPAFQHPLPDSSELSKK-KRKNDEDKFNLDVEILTQPSLGYDG 627
            +G PI+D C+K S+     + Q  L   SEL KK KR   +   + +  +    +  + G
Sbjct: 170  AGLPINDLCNKLSEYSTGSSNQRNL---SELQKKRKRDGGQPSGSFNDPLPPVHARYFSG 226

Query: 626  SASYVNHHVGYNQRNDIGGWSLQMSTSVAIIPSTCSASDKKDISSESLQRIDKENTNSKK 447
              S       ++Q +     S  +S S++ +P+    S+    S +S Q +    T   K
Sbjct: 227  CESSYFQSSCWHQEDKQSHLSNIISQSIS-MPNPTRESNSNGQSEKSSQSV----TELGK 281

Query: 446  RTRLFSWQRRKRCRQL 399
            R R F WQR ++ R L
Sbjct: 282  RRRPFKWQRERKRRLL 297


>ref|XP_004149615.1| PREDICTED: telomerase reverse transcriptase-like [Cucumis sativus]
          Length = 1146

 Score =  147 bits (372), Expect = 4e-33
 Identities = 97/256 (37%), Positives = 138/256 (53%), Gaps = 1/256 (0%)
 Frame = -2

Query: 1163 YLLRRDDPSDYKKLLTESYAVVSDNAPPLSFFYSGCRWSQQQIVKRIIEMSKMTMHDVQV 984
            +LLR DDPS Y++LLT+ Y V+SD A P+S F +  RWSQ+QIV R I+M   T     V
Sbjct: 53   FLLRPDDPSHYRQLLTQCYVVISDKASPVSDFSNESRWSQRQIVVRCIQMLISTQ---PV 109

Query: 983  SPNAICSGYNKCSQSSKVVDLLTTSAWSLFQERIGDDVMVHLLKFVSIFLPVEHGDHHQV 804
              N IC G+N  + SS +VDLLT  AW L   R+ D++M++LL   SIFLP     HHQV
Sbjct: 110  DSNLICCGFNTLALSSPIVDLLTCPAWDLLLSRVRDEMMIYLLMNSSIFLPTSRKRHHQV 169

Query: 803  SGFPISDFCSKFSKDINAPAFQHPLPDSSELSKK-KRKNDEDKFNLDVEILTQPSLGYDG 627
            +G PI+D C+K S+     + Q  L   SEL KK KR   +   + +  +    +  + G
Sbjct: 170  AGLPINDLCNKLSEYSTGSSNQRNL---SELQKKRKRDGGQPSGSFNDPLPPVHARYFSG 226

Query: 626  SASYVNHHVGYNQRNDIGGWSLQMSTSVAIIPSTCSASDKKDISSESLQRIDKENTNSKK 447
              S       ++Q +     S  +S S++ +P+    S+    S +S Q +    T   K
Sbjct: 227  CESSYFQSSCWHQEDKQSHLSNIISQSIS-MPNPTRESNSNGQSEKSSQSV----TELGK 281

Query: 446  RTRLFSWQRRKRCRQL 399
            R R F WQR ++ R L
Sbjct: 282  RRRPFKWQRERKRRLL 297


>gb|ACG63772.1| telomerase reverse transcriptase [Carica papaya]
          Length = 1204

 Score =  132 bits (333), Expect = 1e-28
 Identities = 71/151 (47%), Positives = 97/151 (64%), Gaps = 1/151 (0%)
 Frame = -2

Query: 1175 SSMSYLLRRDDPSDYKKLLTESYAVVSDNAPPLSFFYSGCRWSQQQIVKRIIEMSKMTMH 996
            +++S+L+R DDP  Y++LL   + V++DNA PL  FY     SQ +IV+RIIEM    + 
Sbjct: 55   NAISFLVRPDDPLHYRQLLNCCFVVINDNASPLIDFYPDSHCSQLEIVRRIIEM----LL 110

Query: 995  DVQVSPNAICSGYNKCSQSSKVVDLLTTSAWSLFQERIGDDVMVHLLKFVSIFLPVEHGD 816
                  N +CS YN+ ++SS VVD LT  AW L  +R+GDD+M +LLK  SIFLP+ H  
Sbjct: 111  PEGSKSNILCSDYNRHNRSSPVVDYLTCPAWDLLHKRVGDDLMAYLLKSTSIFLPLCHNK 170

Query: 815  HHQVSGFPISDFCSKFSKD-INAPAFQHPLP 726
            HHQVSG PI+D C K SK  ++   F H +P
Sbjct: 171  HHQVSGPPINDLCLKLSKQKLDYQVFLHFVP 201


>ref|XP_003532879.1| PREDICTED: telomerase reverse transcriptase-like [Glycine max]
          Length = 1097

 Score =  132 bits (332), Expect = 2e-28
 Identities = 100/310 (32%), Positives = 153/310 (49%), Gaps = 19/310 (6%)
 Frame = -2

Query: 1163 YLLRRDDPSDYKKLLTESYAVVSDNAP-PLSFFYS-GCRWSQQQIVKRIIEMSKMTMHDV 990
            +LLR +DPSDY++LL++ +  V  NAP PL FF     R SQ  IV+R IE   +  ++ 
Sbjct: 60   FLLRPEDPSDYRELLSKCFVAVPRNAPSPLPFFSPLSSRLSQYMIVRRTIEPMLLLRNE- 118

Query: 989  QVSPNAICSGYNKCSQSSKVVDLLTTSAWSLFQERIGDDVMVHLLKFVSIFLPVEHGDHH 810
              S N +CSGY+    SS +V+LL+ ++W L   R+GD  M +LL+  S+FLP  HG HH
Sbjct: 119  --SSNVLCSGYDPSKCSSPIVELLSCASWCLLLSRVGDYFMFYLLRNTSVFLPAPHGKHH 176

Query: 809  QVSGFPISDFCSKFSKDINAPAFQH------PLPDSSELSKKKRKNDED-------KFNL 669
            QV G PI+D C K  K  +   +Q+         D+ +L  KK+K            F++
Sbjct: 177  QVGGPPINDLCFKMLKGSSKFCYQNNGEQKRKRVDADDLPVKKQKCHNSYSTIGPLGFSI 236

Query: 668  DVEILTQPSLGYDGSASYVNHHVGYNQRNDIGGWSLQMSTSVAIIP-STCSASDKKDISS 492
            + ++ ++ S+        + HH   N              SV+ +P ST + +  + + S
Sbjct: 237  NCDLTSKYSM------QLIRHHGTRN-----------YDVSVSEVPKSTRTGTVLRKLES 279

Query: 491  ESLQRIDKENTNSKKRTRLFSWQRR--KRCRQLNFGEVSQRNHVGQC-SGQGITSDTNFP 321
            E  Q  +       KR+R F WQRR  K  +QLN  E S   H     + +     T+ P
Sbjct: 280  EGKQGSNCITPRLGKRSRPFKWQRRSCKMQKQLNLEENSLNTHCNVLPTNKDCMRATSLP 339

Query: 320  STCIANIRSK 291
            +T   +  +K
Sbjct: 340  NTTSLSYHAK 349


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