BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012150
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316601.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08
ref|XP_002449215.1| hypothetical protein SORBIDRAFT_05g006490 [S...    64   2e-08
ref|NP_567421.1| F-box/LRR-repeat protein [Arabidopsis thaliana]...    61   8e-08
emb|CAB10188.1| hypothetical protein [Arabidopsis thaliana] gi|7...    61   8e-08
ref|NP_001190724.1| F-box/LRR-repeat protein [Arabidopsis thalia...    60   2e-07

>ref|XP_002316601.1| predicted protein [Populus trichocarpa] gi|222859666|gb|EEE97213.1|
           predicted protein [Populus trichocarpa]
          Length = 420

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 36/78 (46%), Positives = 50/78 (64%)
 Frame = -2

Query: 275 PEGIRDHILSFLPMEDVVKTSILSRQWRHICYSLSDLEFNQREFENMEGKDRNALDFRNF 96
           P+ +  HILSFL  +D V+TSILSR+W H+  SLS+LEF+Q  F     K +  + F N 
Sbjct: 44  PDALLQHILSFLETKDAVRTSILSRKWEHLWKSLSNLEFHQCYF-----KAKRKI-FMNS 97

Query: 95  VDRLLISHDRSDIRSFKL 42
           V+R+L+  D S+I  F L
Sbjct: 98  VERVLLLRDSSNIEKFTL 115


>ref|XP_002449215.1| hypothetical protein SORBIDRAFT_05g006490 [Sorghum bicolor]
           gi|241935058|gb|EES08203.1| hypothetical protein
           SORBIDRAFT_05g006490 [Sorghum bicolor]
          Length = 425

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 33/77 (42%), Positives = 47/77 (61%)
 Frame = -2

Query: 275 PEGIRDHILSFLPMEDVVKTSILSRQWRHICYSLSDLEFNQREFENMEGKDRNALDFRNF 96
           PEGI  H+L FLP  + V+TS+LSR WR +  S++ L  +        G+  +A DF  F
Sbjct: 27  PEGILQHVLYFLPPHEAVRTSVLSRFWRDLWKSMTALRISD------YGRWSSAADFNTF 80

Query: 95  VDRLLISHDRSDIRSFK 45
           V+ LL+S DRS +R F+
Sbjct: 81  VNSLLLSRDRSPLREFE 97


>ref|NP_567421.1| F-box/LRR-repeat protein [Arabidopsis thaliana]
           gi|75249810|sp|Q94B46.1|FBL74_ARATH RecName:
           Full=F-box/LRR-repeat protein At4g14096
           gi|14596145|gb|AAK68800.1| Unknown protein [Arabidopsis
           thaliana] gi|22136112|gb|AAM91134.1| unknown protein
           [Arabidopsis thaliana] gi|332657971|gb|AEE83371.1|
           F-box/LRR-repeat protein [Arabidopsis thaliana]
          Length = 468

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 30/84 (35%), Positives = 49/84 (58%)
 Frame = -2

Query: 275 PEGIRDHILSFLPMEDVVKTSILSRQWRHICYSLSDLEFNQREFENMEGKDRNALDFRNF 96
           PE I  HILSFLP ++   TS+LS++WR++   + +L+ ++  + N E +   +  F +F
Sbjct: 14  PEAISCHILSFLPTKEAASTSVLSKKWRYLFAFVPNLDLDESVYLNPENETEVSSSFMDF 73

Query: 95  VDRLLISHDRSDIRSFKLIIDERV 24
           VDR+L     S +  F L I + V
Sbjct: 74  VDRVLALQGNSPLHKFSLKIGDGV 97


>emb|CAB10188.1| hypothetical protein [Arabidopsis thaliana]
           gi|7268114|emb|CAB78451.1| hypothetical protein
           [Arabidopsis thaliana]
          Length = 1047

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 30/84 (35%), Positives = 49/84 (58%)
 Frame = -2

Query: 275 PEGIRDHILSFLPMEDVVKTSILSRQWRHICYSLSDLEFNQREFENMEGKDRNALDFRNF 96
           PE I  HILSFLP ++   TS+LS++WR++   + +L+ ++  + N E +   +  F +F
Sbjct: 269 PEAISCHILSFLPTKEAASTSVLSKKWRYLFAFVPNLDLDESVYLNPENETEVSSSFMDF 328

Query: 95  VDRLLISHDRSDIRSFKLIIDERV 24
           VDR+L     S +  F L I + V
Sbjct: 329 VDRVLALQGNSPLHKFSLKIGDGV 352



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 24/65 (36%), Positives = 41/65 (63%)
 Frame = -2

Query: 275 PEGIRDHILSFLPMEDVVKTSILSRQWRHICYSLSDLEFNQREFENMEGKDRNALDFRNF 96
           P+ I  HILSFLP ++   TS+LS++WR++   + +L+ +   + N E +   +  F +F
Sbjct: 700 PDDISSHILSFLPTKEAASTSVLSKKWRYLFAFVPNLDLDDSVYLNPENETEISTSFMDF 759

Query: 95  VDRLL 81
           VDR+L
Sbjct: 760 VDRVL 764


>ref|NP_001190724.1| F-box/LRR-repeat protein [Arabidopsis thaliana]
           gi|332657973|gb|AEE83373.1| F-box/LRR-repeat protein
           [Arabidopsis thaliana]
          Length = 443

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 28/84 (33%), Positives = 48/84 (57%)
 Frame = -2

Query: 275 PEGIRDHILSFLPMEDVVKTSILSRQWRHICYSLSDLEFNQREFENMEGKDRNALDFRNF 96
           P+ I  HILSFLP ++   TS+LS++WR++   + +L+ +   + N E +   +  F +F
Sbjct: 14  PDDISSHILSFLPTKEAASTSVLSKKWRYLFAFVPNLDLDDSVYLNPENETEISTSFMDF 73

Query: 95  VDRLLISHDRSDIRSFKLIIDERV 24
           VDR+L     S +  F L I + +
Sbjct: 74  VDRVLALQGNSPLHKFSLKIGDGI 97