BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012149
         (398 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316601.1| predicted protein [Populus trichocarpa] gi|2...    86   4e-15
emb|CBI32919.3| unnamed protein product [Vitis vinifera]               83   3e-14
ref|XP_002520241.1| conserved hypothetical protein [Ricinus comm...    79   3e-13
ref|NP_001190724.1| F-box/LRR-repeat protein [Arabidopsis thalia...    71   1e-10
ref|NP_567422.1| F-box/LRR-repeat protein [Arabidopsis thaliana]...    71   1e-10

>ref|XP_002316601.1| predicted protein [Populus trichocarpa] gi|222859666|gb|EEE97213.1|
           predicted protein [Populus trichocarpa]
          Length = 420

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 55/137 (40%), Positives = 76/137 (55%), Gaps = 6/137 (4%)
 Frame = -2

Query: 397 PEGIRDHILSFLPMEDVVKTSILSRQWRHICYSLYDLEFNQQEFENMEGKDRNAVDFKNF 218
           P+ +  HILSFL  +D V+TSILSR+W H+  SL +LEF+Q  F     K +  + F N 
Sbjct: 44  PDALLQHILSFLETKDAVRTSILSRKWEHLWKSLSNLEFHQCYF-----KAKRKI-FMNS 97

Query: 217 VDRLLISHDMSDIRSFKLTIDELVDGRDAVLDDIQINAWVLFALKHNVRELKLVFI---- 50
           V+R+L+  D S+I  F L+          + D  +   WV  A+  NV+EL + F     
Sbjct: 98  VERVLLLRDSSNIEKFTLSC--------GIDDATRTRTWVSAAVNRNVKELCVNFYEGGE 149

Query: 49  --SEVLPLCIFTCHTLT 5
             S V PLC+FTC TLT
Sbjct: 150 SESFVSPLCLFTCATLT 166


>emb|CBI32919.3| unnamed protein product [Vitis vinifera]
          Length = 411

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 51/138 (36%), Positives = 79/138 (57%), Gaps = 6/138 (4%)
 Frame = -2

Query: 397 PEGIRDHILSFLPMEDVVKTSILSRQWRHICYSLYDLEFNQQ---EFENMEGKDRNAVDF 227
           P+ +  HI+SFLP +  V TS+LS++WR++  S+ +L+F+     + +   G    ++ F
Sbjct: 16  PDAVLCHIISFLPTKFAVGTSVLSKRWRYLWASIPNLDFDDDLLLDRDKPIGDSERSICF 75

Query: 226 KNFVDRLLISHDMSDIRSFKLTIDELVDGRDAVLDDIQINAWVLFALKHNVRELKLVFIS 47
           KNFVD++L+   +S IR F+L         D  LD   +N+W+  AL+ NV+EL L F +
Sbjct: 76  KNFVDKVLLHGSISCIRKFRLKCS------DHELDS-AVNSWICTALERNVQELDLYFDT 128

Query: 46  EV---LPLCIFTCHTLTV 2
           E    LP   F C TL V
Sbjct: 129 EYPIELPPKFFFCKTLVV 146


>ref|XP_002520241.1| conserved hypothetical protein [Ricinus communis]
           gi|223540587|gb|EEF42153.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 193

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 54/138 (39%), Positives = 69/138 (50%), Gaps = 6/138 (4%)
 Frame = -2

Query: 397 PEGIRDHILSFLPMEDVVKTSILSRQWRHICYSLYDLEFNQQEFENMEGKDRNAVDFKNF 218
           PE I  HILS L   D VK+SILSR WRH   S+ DL+ +     N   K       K+F
Sbjct: 19  PEPILCHILSSLDTVDAVKSSILSRIWRHNWTSVADLKIHDSLCPNRRSKRAKLAHMKSF 78

Query: 217 VD---RLLISHDMSDIRSFKLTIDELVDGRDAVLDDIQINAWVLFALKHNVRELKLVFIS 47
           VD   R+L+ H    I    LT++      D       IN+W+L A+ HNV EL L   +
Sbjct: 79  VDLLNRVLMLHKHPYIERLSLTLNNAYSTSD-------INSWILVAVTHNVEELALSIRN 131

Query: 46  EV---LPLCIFTCHTLTV 2
           E    LP  +FTC +L V
Sbjct: 132 ECTLQLPKILFTCESLKV 149


>ref|NP_001190724.1| F-box/LRR-repeat protein [Arabidopsis thaliana]
           gi|332657973|gb|AEE83373.1| F-box/LRR-repeat protein
           [Arabidopsis thaliana]
          Length = 443

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 43/133 (32%), Positives = 70/133 (52%), Gaps = 3/133 (2%)
 Frame = -2

Query: 397 PEGIRDHILSFLPMEDVVKTSILSRQWRHICYSLYDLEFNQQEFENMEGKDRNAVDFKNF 218
           P+ I  HILSFLP ++   TS+LS++WR++   + +L+ +   + N E +   +  F +F
Sbjct: 14  PDDISSHILSFLPTKEAASTSVLSKKWRYLFAFVPNLDLDDSVYLNPENETEISTSFMDF 73

Query: 217 VDRLLISHDMSDIRSFKLTIDELVDGRDAVLDDIQINAWVLFALKHNVRELKLVFISE-- 44
           VDR+L     S +  F L I    DG    +D ++I  W+   L+  V +L L    E  
Sbjct: 74  VDRVLALQGNSPLHKFSLKIG---DG----IDPVRIIPWINNVLERGVSDLDLHLNLESE 126

Query: 43  -VLPLCIFTCHTL 8
            +LP  ++ C TL
Sbjct: 127 FLLPSQVYLCKTL 139


>ref|NP_567422.1| F-box/LRR-repeat protein [Arabidopsis thaliana]
           gi|75245750|sp|Q8L7H1.1|FBL75_ARATH RecName:
           Full=F-box/LRR-repeat protein At4g14103
           gi|22136642|gb|AAM91640.1| unknown protein [Arabidopsis
           thaliana] gi|332657972|gb|AEE83372.1| F-box/LRR-repeat
           protein [Arabidopsis thaliana]
          Length = 381

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 43/133 (32%), Positives = 70/133 (52%), Gaps = 3/133 (2%)
 Frame = -2

Query: 397 PEGIRDHILSFLPMEDVVKTSILSRQWRHICYSLYDLEFNQQEFENMEGKDRNAVDFKNF 218
           P+ I  HILSFLP ++   TS+LS++WR++   + +L+ +   + N E +   +  F +F
Sbjct: 14  PDDISSHILSFLPTKEAASTSVLSKKWRYLFAFVPNLDLDDSVYLNPENETEISTSFMDF 73

Query: 217 VDRLLISHDMSDIRSFKLTIDELVDGRDAVLDDIQINAWVLFALKHNVRELKLVFISE-- 44
           VDR+L     S +  F L I    DG    +D ++I  W+   L+  V +L L    E  
Sbjct: 74  VDRVLALQGNSPLHKFSLKIG---DG----IDPVRIIPWINNVLERGVSDLDLHLNLESE 126

Query: 43  -VLPLCIFTCHTL 8
            +LP  ++ C TL
Sbjct: 127 FLLPSQVYLCKTL 139