BLASTX nr result
ID: Coptis24_contig00012149
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00012149 (398 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002316601.1| predicted protein [Populus trichocarpa] gi|2... 86 4e-15 emb|CBI32919.3| unnamed protein product [Vitis vinifera] 83 3e-14 ref|XP_002520241.1| conserved hypothetical protein [Ricinus comm... 79 3e-13 ref|NP_001190724.1| F-box/LRR-repeat protein [Arabidopsis thalia... 71 1e-10 ref|NP_567422.1| F-box/LRR-repeat protein [Arabidopsis thaliana]... 71 1e-10 >ref|XP_002316601.1| predicted protein [Populus trichocarpa] gi|222859666|gb|EEE97213.1| predicted protein [Populus trichocarpa] Length = 420 Score = 85.5 bits (210), Expect = 4e-15 Identities = 55/137 (40%), Positives = 76/137 (55%), Gaps = 6/137 (4%) Frame = -2 Query: 397 PEGIRDHILSFLPMEDVVKTSILSRQWRHICYSLYDLEFNQQEFENMEGKDRNAVDFKNF 218 P+ + HILSFL +D V+TSILSR+W H+ SL +LEF+Q F K + + F N Sbjct: 44 PDALLQHILSFLETKDAVRTSILSRKWEHLWKSLSNLEFHQCYF-----KAKRKI-FMNS 97 Query: 217 VDRLLISHDMSDIRSFKLTIDELVDGRDAVLDDIQINAWVLFALKHNVRELKLVFI---- 50 V+R+L+ D S+I F L+ + D + WV A+ NV+EL + F Sbjct: 98 VERVLLLRDSSNIEKFTLSC--------GIDDATRTRTWVSAAVNRNVKELCVNFYEGGE 149 Query: 49 --SEVLPLCIFTCHTLT 5 S V PLC+FTC TLT Sbjct: 150 SESFVSPLCLFTCATLT 166 >emb|CBI32919.3| unnamed protein product [Vitis vinifera] Length = 411 Score = 82.8 bits (203), Expect = 3e-14 Identities = 51/138 (36%), Positives = 79/138 (57%), Gaps = 6/138 (4%) Frame = -2 Query: 397 PEGIRDHILSFLPMEDVVKTSILSRQWRHICYSLYDLEFNQQ---EFENMEGKDRNAVDF 227 P+ + HI+SFLP + V TS+LS++WR++ S+ +L+F+ + + G ++ F Sbjct: 16 PDAVLCHIISFLPTKFAVGTSVLSKRWRYLWASIPNLDFDDDLLLDRDKPIGDSERSICF 75 Query: 226 KNFVDRLLISHDMSDIRSFKLTIDELVDGRDAVLDDIQINAWVLFALKHNVRELKLVFIS 47 KNFVD++L+ +S IR F+L D LD +N+W+ AL+ NV+EL L F + Sbjct: 76 KNFVDKVLLHGSISCIRKFRLKCS------DHELDS-AVNSWICTALERNVQELDLYFDT 128 Query: 46 EV---LPLCIFTCHTLTV 2 E LP F C TL V Sbjct: 129 EYPIELPPKFFFCKTLVV 146 >ref|XP_002520241.1| conserved hypothetical protein [Ricinus communis] gi|223540587|gb|EEF42153.1| conserved hypothetical protein [Ricinus communis] Length = 193 Score = 79.3 bits (194), Expect = 3e-13 Identities = 54/138 (39%), Positives = 69/138 (50%), Gaps = 6/138 (4%) Frame = -2 Query: 397 PEGIRDHILSFLPMEDVVKTSILSRQWRHICYSLYDLEFNQQEFENMEGKDRNAVDFKNF 218 PE I HILS L D VK+SILSR WRH S+ DL+ + N K K+F Sbjct: 19 PEPILCHILSSLDTVDAVKSSILSRIWRHNWTSVADLKIHDSLCPNRRSKRAKLAHMKSF 78 Query: 217 VD---RLLISHDMSDIRSFKLTIDELVDGRDAVLDDIQINAWVLFALKHNVRELKLVFIS 47 VD R+L+ H I LT++ D IN+W+L A+ HNV EL L + Sbjct: 79 VDLLNRVLMLHKHPYIERLSLTLNNAYSTSD-------INSWILVAVTHNVEELALSIRN 131 Query: 46 EV---LPLCIFTCHTLTV 2 E LP +FTC +L V Sbjct: 132 ECTLQLPKILFTCESLKV 149 >ref|NP_001190724.1| F-box/LRR-repeat protein [Arabidopsis thaliana] gi|332657973|gb|AEE83373.1| F-box/LRR-repeat protein [Arabidopsis thaliana] Length = 443 Score = 70.9 bits (172), Expect = 1e-10 Identities = 43/133 (32%), Positives = 70/133 (52%), Gaps = 3/133 (2%) Frame = -2 Query: 397 PEGIRDHILSFLPMEDVVKTSILSRQWRHICYSLYDLEFNQQEFENMEGKDRNAVDFKNF 218 P+ I HILSFLP ++ TS+LS++WR++ + +L+ + + N E + + F +F Sbjct: 14 PDDISSHILSFLPTKEAASTSVLSKKWRYLFAFVPNLDLDDSVYLNPENETEISTSFMDF 73 Query: 217 VDRLLISHDMSDIRSFKLTIDELVDGRDAVLDDIQINAWVLFALKHNVRELKLVFISE-- 44 VDR+L S + F L I DG +D ++I W+ L+ V +L L E Sbjct: 74 VDRVLALQGNSPLHKFSLKIG---DG----IDPVRIIPWINNVLERGVSDLDLHLNLESE 126 Query: 43 -VLPLCIFTCHTL 8 +LP ++ C TL Sbjct: 127 FLLPSQVYLCKTL 139 >ref|NP_567422.1| F-box/LRR-repeat protein [Arabidopsis thaliana] gi|75245750|sp|Q8L7H1.1|FBL75_ARATH RecName: Full=F-box/LRR-repeat protein At4g14103 gi|22136642|gb|AAM91640.1| unknown protein [Arabidopsis thaliana] gi|332657972|gb|AEE83372.1| F-box/LRR-repeat protein [Arabidopsis thaliana] Length = 381 Score = 70.9 bits (172), Expect = 1e-10 Identities = 43/133 (32%), Positives = 70/133 (52%), Gaps = 3/133 (2%) Frame = -2 Query: 397 PEGIRDHILSFLPMEDVVKTSILSRQWRHICYSLYDLEFNQQEFENMEGKDRNAVDFKNF 218 P+ I HILSFLP ++ TS+LS++WR++ + +L+ + + N E + + F +F Sbjct: 14 PDDISSHILSFLPTKEAASTSVLSKKWRYLFAFVPNLDLDDSVYLNPENETEISTSFMDF 73 Query: 217 VDRLLISHDMSDIRSFKLTIDELVDGRDAVLDDIQINAWVLFALKHNVRELKLVFISE-- 44 VDR+L S + F L I DG +D ++I W+ L+ V +L L E Sbjct: 74 VDRVLALQGNSPLHKFSLKIG---DG----IDPVRIIPWINNVLERGVSDLDLHLNLESE 126 Query: 43 -VLPLCIFTCHTL 8 +LP ++ C TL Sbjct: 127 FLLPSQVYLCKTL 139