BLASTX nr result

ID: Coptis24_contig00012148 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012148
         (389 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321646.1| predicted protein [Populus trichocarpa] gi|2...    65   7e-09
ref|XP_002318092.1| predicted protein [Populus trichocarpa] gi|2...    59   4e-07
ref|XP_002511290.1| copine, putative [Ricinus communis] gi|22355...    55   4e-06

>ref|XP_002321646.1| predicted protein [Populus trichocarpa] gi|222868642|gb|EEF05773.1|
           predicted protein [Populus trichocarpa]
          Length = 414

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 31/50 (62%), Positives = 40/50 (80%), Gaps = 2/50 (4%)
 Frame = +1

Query: 244 QSPYAQPNSNYGAPQYHAPPPPNYG--ALPQRKLERRYSRINDDYNSLEQ 387
           QSPYAQP+  + A Q++APPP +YG  A   R+LER+YSRI+D+YNSLEQ
Sbjct: 27  QSPYAQPSQEHTAYQHYAPPPQSYGDRAPNSRRLERKYSRIDDNYNSLEQ 76


>ref|XP_002318092.1| predicted protein [Populus trichocarpa] gi|222858765|gb|EEE96312.1|
           predicted protein [Populus trichocarpa]
          Length = 442

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 28/50 (56%), Positives = 37/50 (74%), Gaps = 2/50 (4%)
 Frame = +1

Query: 244 QSPYAQPNSNYGAPQYHAPPPPNYG--ALPQRKLERRYSRINDDYNSLEQ 387
           QSPYAQP+  Y   Q++ PPP +YG  A   R+LER+YS+I+D+YNSL Q
Sbjct: 36  QSPYAQPSQEYMQYQHYVPPPQSYGDPAPNSRRLERKYSKIDDNYNSLVQ 85


>ref|XP_002511290.1| copine, putative [Ricinus communis] gi|223550405|gb|EEF51892.1|
           copine, putative [Ricinus communis]
          Length = 433

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 27/51 (52%), Positives = 35/51 (68%), Gaps = 3/51 (5%)
 Frame = +1

Query: 244 QSPYAQPNSNYGAPQYHAPPPPNYGALPQ---RKLERRYSRINDDYNSLEQ 387
           Q PYAQP   Y A + +AP P +YG       R+LER+YS+I+D+YNSLEQ
Sbjct: 24  QPPYAQPGQEYMAYENYAPAPQSYGGQAPNSGRRLERKYSKIDDNYNSLEQ 74


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