BLASTX nr result

ID: Coptis24_contig00012142 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012142
         (206 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004169512.1| PREDICTED: LOW QUALITY PROTEIN: ABC transpor...   103   1e-20
ref|XP_004135511.1| PREDICTED: ABC transporter C family member 3...   103   1e-20
ref|XP_002315633.1| multidrug resistance protein ABC transporter...   103   2e-20
ref|XP_002312645.1| multidrug resistance protein ABC transporter...   100   2e-19
ref|XP_002515003.1| multidrug resistance-associated protein 2, 6...    97   1e-18

>ref|XP_004169512.1| PREDICTED: LOW QUALITY PROTEIN: ABC transporter C family member
            3-like [Cucumis sativus]
          Length = 1444

 Score =  103 bits (257), Expect = 1e-20
 Identities = 47/68 (69%), Positives = 64/68 (94%)
 Frame = +1

Query: 1    QVLFQLLQIESNYWVASATKEESVVSKKKLIGVFVLLSGGSSIFVLGRAVLLATISIETA 180
            QVLFQ+LQ+ SNYW++ AT+EE  VS+++L+G+F+L+SGGSSIF+LGRAVL+ATI+IETA
Sbjct: 877  QVLFQILQMGSNYWISWATEEEGKVSREQLLGIFILMSGGSSIFILGRAVLMATIAIETA 936

Query: 181  QRLFLGMI 204
            QR+FLGM+
Sbjct: 937  QRMFLGMV 944


>ref|XP_004135511.1| PREDICTED: ABC transporter C family member 3-like [Cucumis sativus]
          Length = 1444

 Score =  103 bits (257), Expect = 1e-20
 Identities = 47/68 (69%), Positives = 64/68 (94%)
 Frame = +1

Query: 1    QVLFQLLQIESNYWVASATKEESVVSKKKLIGVFVLLSGGSSIFVLGRAVLLATISIETA 180
            QVLFQ+LQ+ SNYW++ AT+EE  VS+++L+G+F+L+SGGSSIF+LGRAVL+ATI+IETA
Sbjct: 877  QVLFQILQMGSNYWISWATEEEGKVSREQLLGIFILMSGGSSIFILGRAVLMATIAIETA 936

Query: 181  QRLFLGMI 204
            QR+FLGM+
Sbjct: 937  QRMFLGMV 944


>ref|XP_002315633.1| multidrug resistance protein ABC transporter family [Populus
           trichocarpa] gi|222864673|gb|EEF01804.1| multidrug
           resistance protein ABC transporter family [Populus
           trichocarpa]
          Length = 1044

 Score =  103 bits (256), Expect = 2e-20
 Identities = 51/68 (75%), Positives = 61/68 (89%)
 Frame = +1

Query: 1   QVLFQLLQIESNYWVASATKEESVVSKKKLIGVFVLLSGGSSIFVLGRAVLLATISIETA 180
           QVLFQ LQ+ SNYW+A AT+E   V+K+KLIG+F+LLSGGSS+F+LGRAV LATI+IETA
Sbjct: 509 QVLFQGLQMGSNYWIAWATEENHKVTKEKLIGIFILLSGGSSVFILGRAVFLATIAIETA 568

Query: 181 QRLFLGMI 204
           QRLFLGMI
Sbjct: 569 QRLFLGMI 576


>ref|XP_002312645.1| multidrug resistance protein ABC transporter family [Populus
            trichocarpa] gi|222852465|gb|EEE90012.1| multidrug
            resistance protein ABC transporter family [Populus
            trichocarpa]
          Length = 1361

 Score =  100 bits (248), Expect = 2e-19
 Identities = 49/68 (72%), Positives = 61/68 (89%)
 Frame = +1

Query: 1    QVLFQLLQIESNYWVASATKEESVVSKKKLIGVFVLLSGGSSIFVLGRAVLLATISIETA 180
            QVLFQ LQ+ SNYW+A AT++   V+++KLIG+F+LLSGGSSIF+LGRAVLLATI++ETA
Sbjct: 813  QVLFQGLQMGSNYWIAWATEKSHNVTREKLIGIFILLSGGSSIFILGRAVLLATIAVETA 872

Query: 181  QRLFLGMI 204
            QRLF GMI
Sbjct: 873  QRLFFGMI 880


>ref|XP_002515003.1| multidrug resistance-associated protein 2, 6 (mrp2, 6),
            abc-transoprter, putative [Ricinus communis]
            gi|223546054|gb|EEF47557.1| multidrug
            resistance-associated protein 2, 6 (mrp2, 6),
            abc-transoprter, putative [Ricinus communis]
          Length = 1464

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 47/68 (69%), Positives = 61/68 (89%)
 Frame = +1

Query: 1    QVLFQLLQIESNYWVASATKEESVVSKKKLIGVFVLLSGGSSIFVLGRAVLLATISIETA 180
            QV FQ LQ+ SNYW+A A+++   +S+++LIG+FVLLSGGSSIF+LGRAVLLA+I++ETA
Sbjct: 909  QVFFQGLQMGSNYWIAWASEDRHKISREQLIGIFVLLSGGSSIFILGRAVLLASIAVETA 968

Query: 181  QRLFLGMI 204
            QRLFLGMI
Sbjct: 969  QRLFLGMI 976


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