BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012136
         (633 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635554.1| PREDICTED: pentatricopeptide repeat-containi...   129   6e-28
ref|XP_002270938.2| PREDICTED: pentatricopeptide repeat-containi...   124   1e-26
emb|CBI22140.3| unnamed protein product [Vitis vinifera]              124   1e-26
ref|XP_002303536.1| predicted protein [Populus trichocarpa] gi|2...   112   6e-23
ref|XP_003550529.1| PREDICTED: pentatricopeptide repeat-containi...   108   8e-22

>ref|XP_003635554.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g22760-like [Vitis vinifera]
           gi|296083555|emb|CBI23551.3| unnamed protein product
           [Vitis vinifera]
          Length = 580

 Score =  129 bits (323), Expect = 6e-28
 Identities = 56/75 (74%), Positives = 65/75 (86%)
 Frame = -1

Query: 633 VWGALLLTCQLHSNVELGEIAAQHCIEMEPDSSGYCSLLANIYASAERWDDAKRLRKMME 454
           VWGALLL C+LH+NVE GEIAAQHC E+EPD++GYCSLL+NIYAS ERWDD KRLRK+ +
Sbjct: 505 VWGALLLACRLHNNVEFGEIAAQHCFELEPDTTGYCSLLSNIYASGERWDDVKRLRKVTK 564

Query: 453 ETKLTKTPGCSWMES 409
           E   +K PGCSWMES
Sbjct: 565 EKGFSKIPGCSWMES 579


>ref|XP_002270938.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g22760-like [Vitis vinifera]
          Length = 580

 Score =  124 bits (311), Expect = 1e-26
 Identities = 55/75 (73%), Positives = 64/75 (85%)
 Frame = -1

Query: 633 VWGALLLTCQLHSNVELGEIAAQHCIEMEPDSSGYCSLLANIYASAERWDDAKRLRKMME 454
           VWGALLL C+LH+NVE GEIAAQHC E+EPD++GY SLL+NIYAS ERWDD KRLRK+ +
Sbjct: 505 VWGALLLACRLHNNVEFGEIAAQHCFELEPDTTGYRSLLSNIYASGERWDDVKRLRKVTK 564

Query: 453 ETKLTKTPGCSWMES 409
           E   +K PGCSWMES
Sbjct: 565 EKGFSKIPGCSWMES 579


>emb|CBI22140.3| unnamed protein product [Vitis vinifera]
          Length = 428

 Score =  124 bits (311), Expect = 1e-26
 Identities = 55/75 (73%), Positives = 64/75 (85%)
 Frame = -1

Query: 633 VWGALLLTCQLHSNVELGEIAAQHCIEMEPDSSGYCSLLANIYASAERWDDAKRLRKMME 454
           VWGALLL C+LH+NVE GEIAAQHC E+EPD++GY SLL+NIYAS ERWDD KRLRK+ +
Sbjct: 353 VWGALLLACRLHNNVEFGEIAAQHCFELEPDTTGYRSLLSNIYASGERWDDVKRLRKVTK 412

Query: 453 ETKLTKTPGCSWMES 409
           E   +K PGCSWMES
Sbjct: 413 EKGFSKIPGCSWMES 427


>ref|XP_002303536.1| predicted protein [Populus trichocarpa] gi|222840968|gb|EEE78515.1|
           predicted protein [Populus trichocarpa]
          Length = 596

 Score =  112 bits (280), Expect = 6e-23
 Identities = 51/76 (67%), Positives = 60/76 (78%)
 Frame = -1

Query: 633 VWGALLLTCQLHSNVELGEIAAQHCIEMEPDSSGYCSLLANIYASAERWDDAKRLRKMME 454
           VWGALLL C +H+NVELGEIAAQHC  +E +++ Y SLLANIY+SA RWDD  RLRK+ +
Sbjct: 521 VWGALLLACNVHNNVELGEIAAQHCFNLETNATAYYSLLANIYSSAGRWDDVGRLRKLWK 580

Query: 453 ETKLTKTPGCSWMEST 406
           E KL K  GCSW EST
Sbjct: 581 EKKLAKLSGCSWTEST 596


>ref|XP_003550529.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g22760-like [Glycine max]
          Length = 576

 Score =  108 bits (270), Expect = 8e-22
 Identities = 49/72 (68%), Positives = 60/72 (83%)
 Frame = -1

Query: 633 VWGALLLTCQLHSNVELGEIAAQHCIEMEPDSSGYCSLLANIYASAERWDDAKRLRKMME 454
           VWGALLL C+LH+NVELGEIA QHCI++E D++GYCSLL++IYA+ E+WDDAK+LRK ME
Sbjct: 501 VWGALLLACRLHNNVELGEIAVQHCIKLETDTTGYCSLLSSIYATVEKWDDAKKLRKGME 560

Query: 453 ETKLTKTPGCSW 418
               T   GCSW
Sbjct: 561 GKDFT---GCSW 569