BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012129
         (1858 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28269.3| unnamed protein product [Vitis vinifera]              550   e-154
ref|XP_002272473.1| PREDICTED: transcription factor E2FB-like [V...   550   e-154
ref|XP_002275458.2| PREDICTED: transcription factor E2FA [Vitis ...   531   e-148
emb|CBI30368.3| unnamed protein product [Vitis vinifera]              530   e-148
emb|CAC17702.1| transcription factor (E2F) [Chenopodium rubrum]       520   e-145

>emb|CBI28269.3| unnamed protein product [Vitis vinifera]
          Length = 446

 Score =  550 bits (1416), Expect = e-154
 Identities = 300/449 (66%), Positives = 346/449 (77%), Gaps = 5/449 (1%)
 Frame = +2

Query: 233  RQLPFSPCIKTPFVSSD-DYHRFSAS---EIKESSDSIVVKDSPQQLKRKAETEEYEAET 400
            R LPF P  + PFV S  DYHRFS+S      E+ +++VVK SPQ LKRK+E + YEAE+
Sbjct: 6    RHLPFPPA-RPPFVPSPGDYHRFSSSGRVPDHEADEAVVVK-SPQ-LKRKSEPD-YEAES 61

Query: 401  SGRTFDRAHTEVVNSPHRTPQPGKGGRINSRSKVPKNGRHAPQTPISDADSPGMAVTPVA 580
            S  T     TEVVNSP +TP  GKGG+    S++ K  R  PQTP+S+A SPG  +TPV 
Sbjct: 62   SEWTAVPGFTEVVNSPVQTPVSGKGGKAQKTSRITKCSRSGPQTPVSNAGSPGNNLTPVG 121

Query: 581  H-RIDSSLGILTKKFINLIKHAEDGILDLNEAAETLVVQKRRIYDITNVLEGIGLIEKKL 757
              R DSSLG+LTKKFINLIKHAEDGILDLN+AA+TL VQKRRIYDITNVLEGIGLIEKKL
Sbjct: 122  PCRYDSSLGLLTKKFINLIKHAEDGILDLNKAADTLEVQKRRIYDITNVLEGIGLIEKKL 181

Query: 758  KNRIRWKGSDASGPGEVDHNATILQTEVENLSLEEQRLDDQIREMHERLRDLSEDENSQK 937
            KNRI+WKG D S PGEVD N T LQ EVENLS++E+RLD QIR+M ERLRDLSEDEN+QK
Sbjct: 182  KNRIQWKGLDVSRPGEVDENVTSLQEEVENLSIQERRLDAQIRDMQERLRDLSEDENNQK 241

Query: 938  WLFVTEEDIKSLPCFQNETLIAIKAPHGTTLEVPDPDEAGDDPQRRYRIVLRSTMGPIDV 1117
            WLFVTEEDIK LPCFQ ETLIAIKAPHGTTLEVPDPDEA D PQRRYRIVLRS+MGPIDV
Sbjct: 242  WLFVTEEDIKGLPCFQKETLIAIKAPHGTTLEVPDPDEAVDYPQRRYRIVLRSSMGPIDV 301

Query: 1118 YLVSQFEEKFEDLNGAEAPPSTPLQLSTASNEKHDTAAXXXXXXXXXXXXQQGQDTNRIS 1297
            YLVSQFEEKFE++NG EAPPS P   S++   +  TAA             QGQD +R+S
Sbjct: 302  YLVSQFEEKFEEINGLEAPPSFP---SSSGYNEDPTAAMVTEESRGKEIEIQGQDAHRMS 358

Query: 1298 SDPSTSQDFVSGIMKIVPSDIDSDADYWLLSESGVSITDMWKTDPVVEWGGVNALNAAEF 1477
            SD + SQDFVSGIMKIVPSD+DSDADYWLLS++ VSITDMW+T+P VEW  ++ALN  ++
Sbjct: 359  SDLNASQDFVSGIMKIVPSDVDSDADYWLLSDADVSITDMWRTEPGVEWNELDALN-DDY 417

Query: 1478 VMTAANTPRPQTPPSGIIAVSSAANSNPR 1564
             M   +TP+PQTPPS    V  AAN+  R
Sbjct: 418  AMANVSTPQPQTPPSSAAEVPPAANTPGR 446


>ref|XP_002272473.1| PREDICTED: transcription factor E2FB-like [Vitis vinifera]
          Length = 457

 Score =  550 bits (1416), Expect = e-154
 Identities = 300/449 (66%), Positives = 346/449 (77%), Gaps = 5/449 (1%)
 Frame = +2

Query: 233  RQLPFSPCIKTPFVSSD-DYHRFSAS---EIKESSDSIVVKDSPQQLKRKAETEEYEAET 400
            R LPF P  + PFV S  DYHRFS+S      E+ +++VVK SPQ LKRK+E + YEAE+
Sbjct: 17   RHLPFPPA-RPPFVPSPGDYHRFSSSGRVPDHEADEAVVVK-SPQ-LKRKSEPD-YEAES 72

Query: 401  SGRTFDRAHTEVVNSPHRTPQPGKGGRINSRSKVPKNGRHAPQTPISDADSPGMAVTPVA 580
            S  T     TEVVNSP +TP  GKGG+    S++ K  R  PQTP+S+A SPG  +TPV 
Sbjct: 73   SEWTAVPGFTEVVNSPVQTPVSGKGGKAQKTSRITKCSRSGPQTPVSNAGSPGNNLTPVG 132

Query: 581  H-RIDSSLGILTKKFINLIKHAEDGILDLNEAAETLVVQKRRIYDITNVLEGIGLIEKKL 757
              R DSSLG+LTKKFINLIKHAEDGILDLN+AA+TL VQKRRIYDITNVLEGIGLIEKKL
Sbjct: 133  PCRYDSSLGLLTKKFINLIKHAEDGILDLNKAADTLEVQKRRIYDITNVLEGIGLIEKKL 192

Query: 758  KNRIRWKGSDASGPGEVDHNATILQTEVENLSLEEQRLDDQIREMHERLRDLSEDENSQK 937
            KNRI+WKG D S PGEVD N T LQ EVENLS++E+RLD QIR+M ERLRDLSEDEN+QK
Sbjct: 193  KNRIQWKGLDVSRPGEVDENVTSLQEEVENLSIQERRLDAQIRDMQERLRDLSEDENNQK 252

Query: 938  WLFVTEEDIKSLPCFQNETLIAIKAPHGTTLEVPDPDEAGDDPQRRYRIVLRSTMGPIDV 1117
            WLFVTEEDIK LPCFQ ETLIAIKAPHGTTLEVPDPDEA D PQRRYRIVLRS+MGPIDV
Sbjct: 253  WLFVTEEDIKGLPCFQKETLIAIKAPHGTTLEVPDPDEAVDYPQRRYRIVLRSSMGPIDV 312

Query: 1118 YLVSQFEEKFEDLNGAEAPPSTPLQLSTASNEKHDTAAXXXXXXXXXXXXQQGQDTNRIS 1297
            YLVSQFEEKFE++NG EAPPS P   S++   +  TAA             QGQD +R+S
Sbjct: 313  YLVSQFEEKFEEINGLEAPPSFP---SSSGYNEDPTAAMVTEESRGKEIEIQGQDAHRMS 369

Query: 1298 SDPSTSQDFVSGIMKIVPSDIDSDADYWLLSESGVSITDMWKTDPVVEWGGVNALNAAEF 1477
            SD + SQDFVSGIMKIVPSD+DSDADYWLLS++ VSITDMW+T+P VEW  ++ALN  ++
Sbjct: 370  SDLNASQDFVSGIMKIVPSDVDSDADYWLLSDADVSITDMWRTEPGVEWNELDALN-DDY 428

Query: 1478 VMTAANTPRPQTPPSGIIAVSSAANSNPR 1564
             M   +TP+PQTPPS    V  AAN+  R
Sbjct: 429  AMANVSTPQPQTPPSSAAEVPPAANTPGR 457


>ref|XP_002275458.2| PREDICTED: transcription factor E2FA [Vitis vinifera]
          Length = 498

 Score =  531 bits (1369), Expect = e-148
 Identities = 295/461 (63%), Positives = 336/461 (72%), Gaps = 5/461 (1%)
 Frame = +2

Query: 227  MIRQLPFSPCIKTPFVSSDDYHRFSASEI----KESSDSIVVKDSPQQLKRKAETEEYEA 394
            M R LPF+   K PFV  DDYHRFS+++         + IVVK SPQ LKRK+  ++ E 
Sbjct: 24   MKRHLPFTST-KPPFVPPDDYHRFSSADAHGVANHEPEGIVVK-SPQ-LKRKSAMDDNEV 80

Query: 395  ETSGRTFDRAHTEVVNSPHRTPQPGKGGRINSRSKVPKNGRHAPQTPISDADSPGMAVTP 574
             +S  T    + +  NSP RTP  GKGGRI S+SKV K     PQTP+S+A SP   +TP
Sbjct: 81   GSSEWTASPGYADAGNSPFRTPVSGKGGRIYSKSKVSKGNVCGPQTPVSNAGSPS-TLTP 139

Query: 575  VAH-RIDSSLGILTKKFINLIKHAEDGILDLNEAAETLVVQKRRIYDITNVLEGIGLIEK 751
              + R DSSLG+LTKKFINLIKHAEDGILDLN+AAETL VQKRRIYDITNVLEGIGLIEK
Sbjct: 140  AGNCRYDSSLGLLTKKFINLIKHAEDGILDLNKAAETLEVQKRRIYDITNVLEGIGLIEK 199

Query: 752  KLKNRIRWKGSDASGPGEVDHNATILQTEVENLSLEEQRLDDQIREMHERLRDLSEDENS 931
            KLKNRIRWKG D S PGEVD + TILQ EVENLSLEE+RLDD IREM E+LRDLSEDEN+
Sbjct: 200  KLKNRIRWKGLDVSRPGEVDDDVTILQAEVENLSLEERRLDDHIREMQEKLRDLSEDENN 259

Query: 932  QKWLFVTEEDIKSLPCFQNETLIAIKAPHGTTLEVPDPDEAGDDPQRRYRIVLRSTMGPI 1111
            QKWLFVTE+DIK LPCFQNETLIAIKAPHGTTLEVPDPDEA D PQRRYRIVLRSTMGPI
Sbjct: 260  QKWLFVTEDDIKGLPCFQNETLIAIKAPHGTTLEVPDPDEAVDYPQRRYRIVLRSTMGPI 319

Query: 1112 DVYLVSQFEEKFEDLNGAEAPPSTPLQLSTASNEKHDTAAXXXXXXXXXXXXQQGQDTNR 1291
            DVYLVSQFEEKFE++NG   P S PL  S+ SNE   T              Q G    +
Sbjct: 320  DVYLVSQFEEKFEEMNGTPPPLSFPLASSSGSNENPSTEVVIADSSGKELEPQDGY---Q 376

Query: 1292 ISSDPSTSQDFVSGIMKIVPSDIDSDADYWLLSESGVSITDMWKTDPVVEWGGVNALNAA 1471
            + SD + SQ+F+ GIMKIVP D+DSDADYWL S++ VSITDMWKTD  VEW GV+ LN A
Sbjct: 377  MCSDLTASQEFIGGIMKIVP-DVDSDADYWLRSDAEVSITDMWKTDSYVEWNGVDMLN-A 434

Query: 1472 EFVMTAANTPRPQTPPSGIIAVSSAANSNPR*VGLDKQNGE 1594
            EF M   +TP PQTPPSG+    S A +    +   ++ GE
Sbjct: 435  EFGMADVSTPLPQTPPSGLTEGPSTAVNPTHSLVFSRRRGE 475


>emb|CBI30368.3| unnamed protein product [Vitis vinifera]
          Length = 466

 Score =  530 bits (1366), Expect = e-148
 Identities = 293/446 (65%), Positives = 330/446 (73%), Gaps = 5/446 (1%)
 Frame = +2

Query: 227  MIRQLPFSPCIKTPFVSSDDYHRFSASEI----KESSDSIVVKDSPQQLKRKAETEEYEA 394
            M R LPF+   K PFV  DDYHRFS+++         + IVVK SPQ LKRK+  ++ E 
Sbjct: 24   MKRHLPFTST-KPPFVPPDDYHRFSSADAHGVANHEPEGIVVK-SPQ-LKRKSAMDDNEV 80

Query: 395  ETSGRTFDRAHTEVVNSPHRTPQPGKGGRINSRSKVPKNGRHAPQTPISDADSPGMAVTP 574
             +S  T    + +  NSP RTP  GKGGRI S+SKV K     PQTP+S+A SP   +TP
Sbjct: 81   GSSEWTASPGYADAGNSPFRTPVSGKGGRIYSKSKVSKGNVCGPQTPVSNAGSPS-TLTP 139

Query: 575  VAH-RIDSSLGILTKKFINLIKHAEDGILDLNEAAETLVVQKRRIYDITNVLEGIGLIEK 751
              + R DSSLG+LTKKFINLIKHAEDGILDLN+AAETL VQKRRIYDITNVLEGIGLIEK
Sbjct: 140  AGNCRYDSSLGLLTKKFINLIKHAEDGILDLNKAAETLEVQKRRIYDITNVLEGIGLIEK 199

Query: 752  KLKNRIRWKGSDASGPGEVDHNATILQTEVENLSLEEQRLDDQIREMHERLRDLSEDENS 931
            KLKNRIRWKG D S PGEVD + TILQ EVENLSLEE+RLDD IREM E+LRDLSEDEN+
Sbjct: 200  KLKNRIRWKGLDVSRPGEVDDDVTILQAEVENLSLEERRLDDHIREMQEKLRDLSEDENN 259

Query: 932  QKWLFVTEEDIKSLPCFQNETLIAIKAPHGTTLEVPDPDEAGDDPQRRYRIVLRSTMGPI 1111
            QKWLFVTE+DIK LPCFQNETLIAIKAPHGTTLEVPDPDEA D PQRRYRIVLRSTMGPI
Sbjct: 260  QKWLFVTEDDIKGLPCFQNETLIAIKAPHGTTLEVPDPDEAVDYPQRRYRIVLRSTMGPI 319

Query: 1112 DVYLVSQFEEKFEDLNGAEAPPSTPLQLSTASNEKHDTAAXXXXXXXXXXXXQQGQDTNR 1291
            DVYLVSQFEEKFE++NG   P S PL  S+ SNE   T              Q G    +
Sbjct: 320  DVYLVSQFEEKFEEMNGTPPPLSFPLASSSGSNENPSTEVVIADSSGKELEPQDGY---Q 376

Query: 1292 ISSDPSTSQDFVSGIMKIVPSDIDSDADYWLLSESGVSITDMWKTDPVVEWGGVNALNAA 1471
            + SD + SQ+F+ GIMKIVP D+DSDADYWL S++ VSITDMWKTD  VEW GV+ LN A
Sbjct: 377  MCSDLTASQEFIGGIMKIVP-DVDSDADYWLRSDAEVSITDMWKTDSYVEWNGVDMLN-A 434

Query: 1472 EFVMTAANTPRPQTPPSGIIAVSSAA 1549
            EF M   +TP PQTPPSG+    S A
Sbjct: 435  EFGMADVSTPLPQTPPSGLTEGPSTA 460


>emb|CAC17702.1| transcription factor (E2F) [Chenopodium rubrum]
          Length = 454

 Score =  520 bits (1338), Expect = e-145
 Identities = 278/433 (64%), Positives = 330/433 (76%), Gaps = 4/433 (0%)
 Frame = +2

Query: 233  RQLPFSPCIKTPFVSSD-DYHRFSASEIKESSD--SIVVKDSPQQLKRKAETEEYEAETS 403
            RQLPF+  +K PFV S  DYHRFS +    + D  +IVVK  P  +KRK++T EY+AE+S
Sbjct: 18   RQLPFTS-MKPPFVPSPGDYHRFSDNRAPPAPDPETIVVKTPP--MKRKSDTAEYDAESS 74

Query: 404  GRTFDRAHTEVVNSPHRTPQPGKGGRINSRSKVPKNGRHAPQTPISDADSPGMAVTPVAH 583
              T    +TEVV+SPH+TP  GK G+    S++ K  R  PQTP+S+  SPG  +TPV  
Sbjct: 75   DWTASPGYTEVVSSPHQTPVSGKAGK-GRGSRISKCNRPGPQTPMSNVGSPGNNLTPVGP 133

Query: 584  -RIDSSLGILTKKFINLIKHAEDGILDLNEAAETLVVQKRRIYDITNVLEGIGLIEKKLK 760
             R DSSLG+ TKKFINLIKHAE+GILDLN+AA+TL VQKRRIYDITNVLEGIGLIEKKLK
Sbjct: 134  CRYDSSLGLGTKKFINLIKHAEEGILDLNKAADTLEVQKRRIYDITNVLEGIGLIEKKLK 193

Query: 761  NRIRWKGSDASGPGEVDHNATILQTEVENLSLEEQRLDDQIREMHERLRDLSEDENSQKW 940
            NRI+WKG D S PGEVD + T LQ +VENLS+EE+RLD+QIREM ERLR++SEDEN+QKW
Sbjct: 194  NRIQWKGLDVSRPGEVDDSVTSLQADVENLSIEERRLDEQIREMQERLREMSEDENNQKW 253

Query: 941  LFVTEEDIKSLPCFQNETLIAIKAPHGTTLEVPDPDEAGDDPQRRYRIVLRSTMGPIDVY 1120
            LFVTEEDIK LPCFQNETLIAIKAPHGTTLEVPDPDEA D PQRRYRIVLRSTMGPIDVY
Sbjct: 254  LFVTEEDIKGLPCFQNETLIAIKAPHGTTLEVPDPDEAVDYPQRRYRIVLRSTMGPIDVY 313

Query: 1121 LVSQFEEKFEDLNGAEAPPSTPLQLSTASNEKHDTAAXXXXXXXXXXXXQQGQDTNRISS 1300
            LVSQFEEKFE+++GAE PPS P    + S    DT               QGQ+T+RI S
Sbjct: 314  LVSQFEEKFEEISGAEPPPSIP----STSGYNEDTTTAAKEENRDDETKMQGQETHRICS 369

Query: 1301 DPSTSQDFVSGIMKIVPSDIDSDADYWLLSESGVSITDMWKTDPVVEWGGVNALNAAEFV 1480
            D +  QDFVSGIMKIVP ++DSDADYWLLS++ VSITDMW+TD  VEW  +  ++  ++ 
Sbjct: 370  DANAQQDFVSGIMKIVP-EVDSDADYWLLSDADVSITDMWRTDSGVEWNELGTIH-EDYT 427

Query: 1481 MTAANTPRPQTPP 1519
            +    TP+PQ+PP
Sbjct: 428  VANVGTPQPQSPP 440