BLASTX nr result
ID: Coptis24_contig00012120
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00012120 (226 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003613053.1| Translation initiation factor IF-2 [Medicago... 58 7e-07 ref|NP_001063668.1| Os09g0515500 [Oryza sativa Japonica Group] g... 58 9e-07 gb|EAZ09748.1| hypothetical protein OsI_32038 [Oryza sativa Indi... 58 9e-07 tpg|DAA37623.1| TPA: putative translation elongation/initiation ... 55 5e-06 ref|XP_002872554.1| hypothetical protein ARALYDRAFT_489954 [Arab... 55 5e-06 >ref|XP_003613053.1| Translation initiation factor IF-2 [Medicago truncatula] gi|355514388|gb|AES96011.1| Translation initiation factor IF-2 [Medicago truncatula] Length = 749 Score = 58.2 bits (139), Expect = 7e-07 Identities = 28/48 (58%), Positives = 37/48 (77%), Gaps = 1/48 (2%) Frame = -1 Query: 181 KKNRSRPPVDTPYVP-KQKIEKSMPDRTINIFEGMTIPELANRTGRSI 41 K +R++PPVD P+VP K KS PD+TI IFEGMT+ ELA R+G+S+ Sbjct: 54 KGSRNQPPVDAPHVPCKVTATKSNPDKTIEIFEGMTLVELAKRSGKSV 101 >ref|NP_001063668.1| Os09g0515500 [Oryza sativa Japonica Group] gi|50725362|dbj|BAD34434.1| putative translation initiation factor IF-2 [Oryza sativa Japonica Group] gi|50726238|dbj|BAD33814.1| putative translation initiation factor IF-2 [Oryza sativa Japonica Group] gi|113631901|dbj|BAF25582.1| Os09g0515500 [Oryza sativa Japonica Group] gi|125606325|gb|EAZ45361.1| hypothetical protein OsJ_30008 [Oryza sativa Japonica Group] gi|215686824|dbj|BAG89674.1| unnamed protein product [Oryza sativa Japonica Group] Length = 716 Score = 57.8 bits (138), Expect = 9e-07 Identities = 28/49 (57%), Positives = 40/49 (81%), Gaps = 2/49 (4%) Frame = -1 Query: 181 KKNRSRPPVDTPYV-PKQKIE-KSMPDRTINIFEGMTIPELANRTGRSI 41 ++ R++PPV+ PYV PKQKI KS PD+T++IF+GMT+ +L+ RTG SI Sbjct: 98 RETRTQPPVEAPYVAPKQKIAIKSSPDKTVDIFDGMTLLDLSKRTGASI 146 >gb|EAZ09748.1| hypothetical protein OsI_32038 [Oryza sativa Indica Group] Length = 716 Score = 57.8 bits (138), Expect = 9e-07 Identities = 28/49 (57%), Positives = 40/49 (81%), Gaps = 2/49 (4%) Frame = -1 Query: 181 KKNRSRPPVDTPYV-PKQKIE-KSMPDRTINIFEGMTIPELANRTGRSI 41 ++ R++PPV+ PYV PKQKI KS PD+T++IF+GMT+ +L+ RTG SI Sbjct: 98 RETRTQPPVEAPYVAPKQKIAIKSSPDKTVDIFDGMTLLDLSKRTGASI 146 >tpg|DAA37623.1| TPA: putative translation elongation/initiation factor family protein [Zea mays] Length = 712 Score = 55.5 bits (132), Expect = 5e-06 Identities = 27/49 (55%), Positives = 38/49 (77%), Gaps = 2/49 (4%) Frame = -1 Query: 181 KKNRSRPPVDTPYV-PKQKIE-KSMPDRTINIFEGMTIPELANRTGRSI 41 K+NR++PPV+ PYV PK KI K +PD+T+ IF+GMT+ +L+ RTG I Sbjct: 94 KENRTQPPVEAPYVAPKTKISIKPVPDKTVEIFDGMTLLDLSKRTGAYI 142 >ref|XP_002872554.1| hypothetical protein ARALYDRAFT_489954 [Arabidopsis lyrata subsp. lyrata] gi|297318391|gb|EFH48813.1| hypothetical protein ARALYDRAFT_489954 [Arabidopsis lyrata subsp. lyrata] Length = 746 Score = 55.5 bits (132), Expect = 5e-06 Identities = 23/49 (46%), Positives = 37/49 (75%), Gaps = 2/49 (4%) Frame = -1 Query: 181 KKNRSRPPVDTPYVPKQ--KIEKSMPDRTINIFEGMTIPELANRTGRSI 41 +K +PPV+ PYVP + ++ K +P++T++IFEGMT+ EL+ RTG S+ Sbjct: 122 EKKSDKPPVEAPYVPPRLKRLAKGLPEKTVDIFEGMTLLELSRRTGESV 170