BLASTX nr result
ID: Coptis24_contig00012118
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00012118
(1964 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002267225.2| PREDICTED: uncharacterized protein LOC100247... 436 e-119
emb|CAN72961.1| hypothetical protein VITISV_016489 [Vitis vinifera] 432 e-118
ref|XP_004150388.1| PREDICTED: uncharacterized protein LOC101212... 403 e-110
ref|XP_003543366.1| PREDICTED: ribosomal RNA processing protein ... 397 e-108
ref|XP_002318342.1| predicted protein [Populus trichocarpa] gi|2... 389 e-105
>ref|XP_002267225.2| PREDICTED: uncharacterized protein LOC100247924 [Vitis vinifera]
Length = 547
Score = 436 bits (1120), Expect = e-119
Identities = 249/550 (45%), Positives = 331/550 (60%), Gaps = 7/550 (1%)
Frame = -2
Query: 1909 IKQLASCNKKTRDKATHLLKTWLPTHPQITNEEMRKIWKGLFYTLWHSDKSQVQLDLINL 1730
I+ LASC+K TRD+A LL TWLP+ Q++ E+M+K+WKGLFY+LWH+DK+ VQ DLI+
Sbjct: 6 IRHLASCDKSTRDEALRLLHTWLPSQSQVSEEDMKKVWKGLFYSLWHADKTPVQSDLIDR 65
Query: 1729 LAGLIVSLDISLSVEYFDVFLLTIRREWSGIDYLRLDKFYCLIRKFLSNLFVLMRDNKWG 1550
LA L+ +L++ LS+ YF VFLLT+RREW GID LRLDKFY LIRKF+ N F+++++N W
Sbjct: 66 LASLLTTLNLPLSIHYFSVFLLTMRREWPGIDALRLDKFYLLIRKFMYNFFLVLKNNSWD 125
Query: 1549 VEIVREFMLILEEKTFLSCDKFPAQGVNYHLVGVFLEELKPFLPVNGEVIEVLLKPFVTV 1370
+EI + +++LE L +F GV YH+ VFLEEL+PFLPV E++ VL +PFV V
Sbjct: 126 LEISKRLIVVLE----LEDGRFSGNGVGYHVASVFLEELRPFLPVRREIVSVLFEPFVEV 181
Query: 1369 LGRSLDKVLLSKIKGCLFGVLLENXXXXXXXXXXXXXXXXXXXXXXXELFGSIALMLGFS 1190
+GRS DKVL+ K+K +F L+ FG++A+ GFS
Sbjct: 182 MGRSADKVLVGKVKSNVFDFLVR---MGQRLLEVKRLGGDEGGDGDAVAFGTLAVGFGFS 238
Query: 1189 KKFFELGSSEECVQGNRKVLFGLHEEFGKLEKDLACSGIEIKVPEVRN---EEVSELVPV 1019
KKF+ELGS+ +C+QGNRKVLFGLHE F KLEKD A + IEI +PE N +E+ L+P+
Sbjct: 239 KKFYELGSAPDCLQGNRKVLFGLHEGFAKLEKDFASARIEISIPEDDNCDEDELPTLIPI 298
Query: 1018 TQVDVSMDEVSEQQVEVGDKVSIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 839
Q + ++ SE VE S+G
Sbjct: 299 AQPEAEVEGASE-VVE-----SVGNGSARKASKKSKKLKKVSGGSDKKNKMKKKKSPDLV 352
Query: 838 XDHSEVKDGSENGNMLNGENS----TDDGGLITLNAAVISNLQMQFEKVAAEVGMDTDDS 671
++S + +EN + N ENS + D LI N +VISNLQMQFEKVAAEVG+ +
Sbjct: 353 SENSATVEYNENVTVPNDENSNCEPSSDQSLIDFNESVISNLQMQFEKVAAEVGLGNELM 412
Query: 670 FAFDLPETPLVASVPKKRKRAKSIGGQVSVCDDLIGQDVNGGSAFGKTAEKSGKKVKFAM 491
D P P+ +V KKRKRAK+ D+ Q + SA K+ KS KKVKF++
Sbjct: 413 GLCDSPTRPVNGTVSKKRKRAKNNNEH-----DVSSQGDDESSALAKSKGKSAKKVKFSI 467
Query: 490 KDNLVWKXXXXXXXXXXXXXXSATPRGSALKKGVPAGPVIETPTMVKKVKRRATSLKKAR 311
K+NLVWK S TPRGSALKKG+P GPV E P KKVK+RA SLKK R
Sbjct: 468 KNNLVWKPQSPLPPQSLRLPPSVTPRGSALKKGIPPGPVREMP-QTKKVKKRAKSLKKGR 526
Query: 310 KSLKSVSPSV 281
+KS+SP++
Sbjct: 527 NGIKSISPAI 536
>emb|CAN72961.1| hypothetical protein VITISV_016489 [Vitis vinifera]
Length = 547
Score = 432 bits (1110), Expect = e-118
Identities = 248/550 (45%), Positives = 330/550 (60%), Gaps = 7/550 (1%)
Frame = -2
Query: 1909 IKQLASCNKKTRDKATHLLKTWLPTHPQITNEEMRKIWKGLFYTLWHSDKSQVQLDLINL 1730
I+ LASC+K TRD+A LL TWLP+ Q++ E+M+K+WKGLFY+LWH+DK+ VQ DLI+
Sbjct: 6 IRHLASCDKSTRDEALRLLHTWLPSQSQVSEEDMKKVWKGLFYSLWHADKTAVQSDLIDR 65
Query: 1729 LAGLIVSLDISLSVEYFDVFLLTIRREWSGIDYLRLDKFYCLIRKFLSNLFVLMRDNKWG 1550
LA L+ +L++ LS+ YF VFLLT+RREW GID LRLDKFY LIRKF+ N F+++++N W
Sbjct: 66 LASLLTTLNLPLSIHYFSVFLLTMRREWPGIDALRLDKFYLLIRKFMYNFFLVLKNNSWD 125
Query: 1549 VEIVREFMLILEEKTFLSCDKFPAQGVNYHLVGVFLEELKPFLPVNGEVIEVLLKPFVTV 1370
+EI + +++LE L +F GV YH+ VFLEEL+PFLPV E++ VL +PFV V
Sbjct: 126 LEISKRLIVVLE----LEDGRFSGNGVGYHVASVFLEELRPFLPVRREIVSVLFEPFVEV 181
Query: 1369 LGRSLDKVLLSKIKGCLFGVLLENXXXXXXXXXXXXXXXXXXXXXXXELFGSIALMLGFS 1190
+GRS DKVL+ K+K +F L+ FG++A+ GFS
Sbjct: 182 MGRSADKVLVGKVKSNVFDFLVR---MGQRLLEVKRLGGDEGGDGDAVAFGTLAVGFGFS 238
Query: 1189 KKFFELGSSEECVQGNRKVLFGLHEEFGKLEKDLACSGIEIKVPEVRN---EEVSELVPV 1019
KKF+ELGS+ +C+QGNRKVLFGLHE F KLEKD A + IEI +PE N +E+ L+P+
Sbjct: 239 KKFYELGSAPDCLQGNRKVLFGLHEGFAKLEKDFASARIEISIPEDDNCDEDELPTLIPI 298
Query: 1018 TQVDVSMDEVSEQQVEVGDKVSIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 839
Q + ++ SE VE S+G
Sbjct: 299 AQPEAEVEGASE-VVE-----SVGNGSARKASKKSKKLKKVSGGSDKKNKMKKKKSPDLV 352
Query: 838 XDHSEVKDGSENGNMLNGENS----TDDGGLITLNAAVISNLQMQFEKVAAEVGMDTDDS 671
++S + +EN + N ENS + D LI N +VISNLQMQFEKVAAEVG+ +
Sbjct: 353 SENSATVEYNENVTVPNDENSNCEPSSDQSLIDFNESVISNLQMQFEKVAAEVGLGNELM 412
Query: 670 FAFDLPETPLVASVPKKRKRAKSIGGQVSVCDDLIGQDVNGGSAFGKTAEKSGKKVKFAM 491
D P + +V KKRKRAK+ D+ Q + SA K+ KS KKVKF++
Sbjct: 413 GLCDSPTRLVNGTVSKKRKRAKNNNEH-----DVSSQGDDESSALAKSKGKSAKKVKFSI 467
Query: 490 KDNLVWKXXXXXXXXXXXXXXSATPRGSALKKGVPAGPVIETPTMVKKVKRRATSLKKAR 311
K+NLVWK S TPRGSALKKG+P GPV E P KKVK+RA SLKK R
Sbjct: 468 KNNLVWKPQSPLPPQSLRLPPSVTPRGSALKKGIPPGPVREMP-QTKKVKKRAKSLKKGR 526
Query: 310 KSLKSVSPSV 281
+KS+SP++
Sbjct: 527 NGIKSISPAI 536
>ref|XP_004150388.1| PREDICTED: uncharacterized protein LOC101212182 [Cucumis sativus]
gi|449508226|ref|XP_004163255.1| PREDICTED:
uncharacterized protein LOC101227674 [Cucumis sativus]
Length = 566
Score = 403 bits (1036), Expect = e-110
Identities = 238/560 (42%), Positives = 323/560 (57%), Gaps = 19/560 (3%)
Frame = -2
Query: 1912 IIKQLASCNKKTRDKATH-LLKTWLPTHPQITNEEMRKIWKGLFYTLWHSDKSQVQLDLI 1736
++K LAS NK TRDK ++KTWLPT +++ +M+K+WKGLFY +WH+DK VQ +LI
Sbjct: 14 LVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVWHADKVPVQSELI 73
Query: 1735 NLLAGLIVSLDISLSVEYFDVFLLTIRREWSGIDYLRLDKFYCLIRKFLSNLFVLMRDNK 1556
N LA L++ LD+SL+V+YF VFLLT+RREW+GID LRLDKFY LIR+FL F L++ +
Sbjct: 74 NRLASLLLHLDLSLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRRFLHQFFALLKKHS 133
Query: 1555 WGVEIVREFMLILEEKTFLSCDKFPAQGVNYHLVGVFLEELKPFLPVNGEVIEVLLKPFV 1376
W +E+ R + +LEE+ + + DKF GVNY + VFLEEL+PFLP+ EV++VL KPF+
Sbjct: 134 WDLELCRRLVQVLEERVYFNEDKFHGNGVNYQIASVFLEELRPFLPLQKEVVDVLFKPFL 193
Query: 1375 TVLGRSLDKVLLSKIKGCLFGVLLENXXXXXXXXXXXXXXXXXXXXXXXELFGSIALMLG 1196
+ + DKVLL KIK LF V+L+ ++G+++L
Sbjct: 194 LSMTKLPDKVLLGKIKSNLFDVILKK---GKQLLESRKRGDDVDSVDDTVVYGTVSLTNQ 250
Query: 1195 FSKKFFELGSSEECVQGNRKVLFGLHEEFGKLEKDLACSGIEIKVPEVR---NEEVSELV 1025
FS F+ELGSS +C QGNRKVLF +HEEF KLEKD SGIEI P+++ +EV LV
Sbjct: 251 FSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQEQDGDEVPTLV 310
Query: 1024 PVTQVDVSMDEVSEQQVEVG-DKVSIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 848
P++ ++ + E+S V+VG +
Sbjct: 311 PISSIEEAPSEISLVDVDVGTESTDKALKKQKKSKKATDGSGKKKAKKAKKAKKTTNGIS 370
Query: 847 XXXXDHSEVKDGSENGNMLNGENSTD----DGGLITLNAAVISNLQMQFEKVAAEVGMDT 680
+++ +EN + NGENS + DG +IT + VISNLQMQFE+VAAE
Sbjct: 371 DLVSENTPANKDNENIVVANGENSNNEQISDGNMITFDETVISNLQMQFERVAAE----A 426
Query: 679 DDSFAFDLPETPLVASVPKKRKRAKSIGGQVSVCDDLIGQDVNGGSAFGKTAEKSGKKVK 500
D + P SV KKRKRAK++G L + V G+ K+ EKS KKV+
Sbjct: 427 DFGKSTVSPVISTNGSV-KKRKRAKNVGELQKHDAGLPSEAVAEGNTAAKSEEKSVKKVR 485
Query: 499 FAMKDNLVWKXXXXXXXXXXXXXXSATPRGSALKKGVPAGPVIETPTMVKKVKRRATSLK 320
F+MK+NLVWK S TPRGSALKKG+P GP++E P K+ KRRA S++
Sbjct: 486 FSMKNNLVWKPHNPLPPESLRLPPSVTPRGSALKKGIPPGPILEFPATTKRTKRRAVSMR 545
Query: 319 ----------KARKSLKSVS 290
K K LKS S
Sbjct: 546 TKNGVRSLPVKRLKKLKSKS 565
>ref|XP_003543366.1| PREDICTED: ribosomal RNA processing protein 1 homolog [Glycine max]
Length = 541
Score = 397 bits (1021), Expect = e-108
Identities = 241/554 (43%), Positives = 329/554 (59%), Gaps = 12/554 (2%)
Frame = -2
Query: 1912 IIKQLASCNKKTRDKATHLL-KTWLPTHPQ-ITNEEMRKIWKGLFYTLWHSDKSQVQLDL 1739
++KQLA C K TRDK+ LL K+WLP+ Q +++++ +K+WKGLFY +WHSDK VQ DL
Sbjct: 12 LVKQLACCKKTTRDKSLRLLLKSWLPSQSQPLSDDDAKKLWKGLFYCMWHSDKPLVQSDL 71
Query: 1738 INLLAGLIVSLDISLSVEYFDVFLLTIRREWSGIDYLRLDKFYCLIRKFLSNLFVLMRDN 1559
++ L+ L++SL +S+S++Y FLLT+RREWSGID LRLDKFY LIR+F+S LF LM+ N
Sbjct: 72 VDRLSSLLLSLHLSVSLQYLSTFLLTMRREWSGIDALRLDKFYLLIRRFVSKLFSLMKTN 131
Query: 1558 KWGVEIVREFMLILEEKTFLSCD-KFPAQGVNYHLVGVFLEELKPFLPVNGEVIEVLLKP 1382
W + +V+ M + +E T + D K GVNYH+ VFLEEL+PFLP+ +V+EVLLKP
Sbjct: 132 SWDLLLVQRLMNVFDEGTLSAQDNKSHGNGVNYHIATVFLEELRPFLPLKQQVLEVLLKP 191
Query: 1381 FVTVLGRSLDKVLLSKIKGCLFGVLLENXXXXXXXXXXXXXXXXXXXXXXXELFGSIALM 1202
FV+ +GR DKVL+ KI+ +F +LL+ L G++AL+
Sbjct: 192 FVSAMGRVHDKVLVGKIRSGVFDLLLK-MGKRLLEVKKSGVEVEVDSRDEVVLIGTVALV 250
Query: 1201 LGFSKKFFELGSSEECVQGNRKVLFGLHEEFGKLEKDLACSGIEIKVPEV----RNEEVS 1034
+GFS + +E+GSS EC+QGNRKVLF LH EF KLEK+ SG E +P+ EEV
Sbjct: 251 MGFSGRLYEVGSSAECIQGNRKVLFALHSEFLKLEKESVNSGFEFVIPDFVVDEEEEEVP 310
Query: 1033 ELVPVTQVDVSMDEVSEQQVEVGDKVSIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 854
ELVP+ +V+ + ++ + KVS+
Sbjct: 311 ELVPLGPAEVAGNGEVLKKCKKDKKVSV-------------------------EGGKSKK 345
Query: 853 XXXXXXDHSEVKDGSENGNML--NGENSTDDGGLITLNAAVISNLQMQFEKVAAEVGMDT 680
+ +D S+ N+ NG NS +DG ++ LN VI+NLQ QFEKVA E G+D
Sbjct: 346 KKKKKKGDAAAQDSSDKENVACENGGNS-NDGSVVLLNETVIANLQRQFEKVAEEAGLDD 404
Query: 679 DDSFAFDLPETPLV--ASVPKKRKRAKSIGGQVSV-CDDLIGQDVNGGSAFGKTAEKSGK 509
+ A D P+ +V KKRKR KS+ G+ S DL G++ SA K+ EKS K
Sbjct: 405 GVASACDSPQAASATGGTVSKKRKRTKSLKGKASQDSADLDGEE----SAVAKSGEKSTK 460
Query: 508 KVKFAMKDNLVWKXXXXXXXXXXXXXXSATPRGSALKKGVPAGPVIETPTMVKKVKRRAT 329
KV+F+M +NLVWK SATPRGSALKKGVP GP+ E P KK K
Sbjct: 461 KVRFSMINNLVWKPHNPLPPQSLRLPPSATPRGSALKKGVPPGPIREMPLPTKKPK---- 516
Query: 328 SLKKARKSLKSVSP 287
LK+ARK++K V+P
Sbjct: 517 -LKRARKAIKGVAP 529
>ref|XP_002318342.1| predicted protein [Populus trichocarpa] gi|222859015|gb|EEE96562.1|
predicted protein [Populus trichocarpa]
Length = 545
Score = 389 bits (1000), Expect = e-105
Identities = 238/554 (42%), Positives = 315/554 (56%), Gaps = 8/554 (1%)
Frame = -2
Query: 1921 SSLIIKQLASCNKKTRDKATH-LLKTWLPTHPQITNEEMRKIWKGLFYTLWHSDKSQVQL 1745
S +IKQLAS + KTR+K+ LL WLP+ PQI+ E M+KIWKGLFY +WH+DKS Q
Sbjct: 12 SKALIKQLASSDTKTRNKSLKILLNKWLPSQPQISEETMKKIWKGLFYCMWHADKSLAQN 71
Query: 1744 DLINLLAGLIVSLDI-SLSVEYFDVFLLTIRREWSGIDYLRLDKFYCLIRKFLSNLFVLM 1568
LIN L+ L+ +++ S+ YF VFL+T+RREWSGID LRLDKFY LIR+F+++ F +
Sbjct: 72 QLINKLSSLLTVIEVESVCFSYFSVFLVTMRREWSGIDGLRLDKFYLLIRRFVNSFFGFL 131
Query: 1567 RDNKWGVEIVREFMLILEEKTFLSCDKFPAQGVNYHLVGVFLEELKPFLPVNGEVIEVLL 1388
+ WG+++V FM + EK FL+ D F GVNYH+V VF+EELK FLPV +EV+
Sbjct: 132 KKKGWGLDVVERFMRVFVEKGFLADDNFLGNGVNYHVVSVFVEELKGFLPVKEAALEVIF 191
Query: 1387 KPFVTVLGRSLDKVLLSKIKGCLFGVLLENXXXXXXXXXXXXXXXXXXXXXXXELFGSIA 1208
FV V+G+ DKVLL KIK +F +LL + GSIA
Sbjct: 192 GNFVGVMGKVSDKVLLGKIKSNVFDLLLR---MGKELLEVKIKGDDVGDNDEVVILGSIA 248
Query: 1207 LMLGFSKKFFELGSSEECVQGNRKVLFGLHEEFGKLEKDLACSGIEIKVPEVRNEEVSEL 1028
L++GFSK+F+ELGSS EC QGNRKV+ GLHE F KLEKD SGI+I +PE +E E
Sbjct: 249 LVMGFSKRFYELGSSVECCQGNRKVVLGLHEVFLKLEKDFVASGIKIALPESNGDEDEEE 308
Query: 1027 VPVTQVDVSMDEVSEQQVEVGDKVSIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 848
VP V +D + GD +
Sbjct: 309 VPAL---VPIDSGMGVEGLNGDVAN----------------------GPGSKKLKKSKKA 343
Query: 847 XXXXDHSEVKDGSENGNMLNGENS----TDDGGLITLNAAVISNLQMQFEKVAAEVGMDT 680
+S+ + ++ NGENS T D L+ + + I+NLQ QFEKVAAEVG+D
Sbjct: 344 KESDGNSKKAKKKKRNDLPNGENSSKEKTVDDNLVRFDESAIANLQRQFEKVAAEVGIDE 403
Query: 679 DDSFAFDLPETPLVASVPKKRKRAKSIGGQVSVCDDLIGQ--DVNGGSAFGKTAEKSGKK 506
+ D P+ ++ KKRKRAK + + S + GQ D G S K+ EKS KK
Sbjct: 404 GVTSVCDFPKVTGNGNLSKKRKRAKRVELKQSENQESNGQEDDEAGTSTMAKSTEKSAKK 463
Query: 505 VKFAMKDNLVWKXXXXXXXXXXXXXXSATPRGSALKKGVPAGPVIETPTMVKKVKRRATS 326
V+F+MK+NL+WK S TPRGSALKKG+P GPV E P K +K+RA S
Sbjct: 464 VRFSMKNNLIWKPSTPLPPQSLRIPPSVTPRGSALKKGIPPGPVREMPAK-KNMKQRAKS 522
Query: 325 LKKARKSLKSVSPS 284
+KK +K +SP+
Sbjct: 523 MKKV---IKGISPA 533