BLASTX nr result

ID: Coptis24_contig00012113 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012113
         (322 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003625742.1| hypothetical protein MTR_7g102790 [Medicago ...   101   6e-20
ref|XP_002519431.1| protein with unknown function [Ricinus commu...   101   6e-20
emb|CBI30183.3| unnamed protein product [Vitis vinifera]              100   2e-19
ref|XP_002326397.1| predicted protein [Populus trichocarpa] gi|2...    99   3e-19
ref|XP_002298164.1| predicted protein [Populus trichocarpa] gi|2...    99   5e-19

>ref|XP_003625742.1| hypothetical protein MTR_7g102790 [Medicago truncatula]
           gi|355500757|gb|AES81960.1| hypothetical protein
           MTR_7g102790 [Medicago truncatula]
          Length = 206

 Score =  101 bits (252), Expect = 6e-20
 Identities = 56/107 (52%), Positives = 66/107 (61%), Gaps = 32/107 (29%)
 Frame = -2

Query: 309 SECNMYCLDCN-GTAAFCFYCRSSRRKDHYVIQIRRSSYHDVVRVAEIQ----------- 166
           +ECNMYCLDCN G  AFCFYCRSSR KDH VIQIRRSSYHDVVRV+EIQ           
Sbjct: 31  NECNMYCLDCNNGDGAFCFYCRSSRHKDHQVIQIRRSSYHDVVRVSEIQKVLDISGVQTY 90

Query: 165 -------------------RGVSYL*NLWQKS-LHTFRFCSLGCKLK 85
                              +GV+++  +  +S L +FRFCSLGCKL+
Sbjct: 91  VINSARVLFLNVRPQPKSGKGVAHICEICGRSLLDSFRFCSLGCKLE 137


>ref|XP_002519431.1| protein with unknown function [Ricinus communis]
           gi|223541294|gb|EEF42845.1| protein with unknown
           function [Ricinus communis]
          Length = 208

 Score =  101 bits (252), Expect = 6e-20
 Identities = 57/105 (54%), Positives = 64/105 (60%), Gaps = 31/105 (29%)
 Frame = -2

Query: 309 SECNMYCLDCNGTAAFCFYCRSSRRKDHYVIQIRRSSYHDVVRVAEIQ------------ 166
           SECNMYCLDC G A FCFYCRSSR KDH VIQIRRSSYHDVVRVAEIQ            
Sbjct: 28  SECNMYCLDCRGDA-FCFYCRSSRHKDHQVIQIRRSSYHDVVRVAEIQKVIDISGVQTYV 86

Query: 165 ------------------RGVSYL*NLWQKS-LHTFRFCSLGCKL 88
                             +GV+++  +  +S L TFRFCSLGCK+
Sbjct: 87  INSARVLFLNERPQPKSGKGVAHICEICGRSLLDTFRFCSLGCKV 131


>emb|CBI30183.3| unnamed protein product [Vitis vinifera]
          Length = 204

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 57/105 (54%), Positives = 63/105 (60%), Gaps = 31/105 (29%)
 Frame = -2

Query: 309 SECNMYCLDCNGTAAFCFYCRSSRRKDHYVIQIRRSSYHDVVRVAEIQ------------ 166
           SECNMYCLDC+G + FCFYCRSSR KDH VIQIRRSSYHDVVRVAEIQ            
Sbjct: 28  SECNMYCLDCSGDS-FCFYCRSSRHKDHQVIQIRRSSYHDVVRVAEIQKVLDISGVQTYV 86

Query: 165 ------------------RGVSYL*NLWQKS-LHTFRFCSLGCKL 88
                             +GVS++     +S L  FRFCSLGCKL
Sbjct: 87  INSARVLFLNERPQPKTGKGVSHICETCGRSLLDPFRFCSLGCKL 131


>ref|XP_002326397.1| predicted protein [Populus trichocarpa] gi|222833590|gb|EEE72067.1|
           predicted protein [Populus trichocarpa]
          Length = 202

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 55/106 (51%), Positives = 64/106 (60%), Gaps = 31/106 (29%)
 Frame = -2

Query: 309 SECNMYCLDCNGTAAFCFYCRSSRRKDHYVIQIRRSSYHDVVRVAEIQ------------ 166
           SECNMYCLDC G A FCFYCRSSR KDH V+QIRRSSYHDVVRV+EIQ            
Sbjct: 31  SECNMYCLDCEGDA-FCFYCRSSRHKDHQVVQIRRSSYHDVVRVSEIQKVLDTSGVQTYV 89

Query: 165 ------------------RGVSYL*NLWQKS-LHTFRFCSLGCKLK 85
                             +GV+++  +  +S L  FRFCSLGCKL+
Sbjct: 90  INSARVLFLNERPQPKSGKGVAHICEICGRSLLDPFRFCSLGCKLE 135


>ref|XP_002298164.1| predicted protein [Populus trichocarpa] gi|222845422|gb|EEE82969.1|
           predicted protein [Populus trichocarpa]
          Length = 209

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 57/107 (53%), Positives = 63/107 (58%), Gaps = 33/107 (30%)
 Frame = -2

Query: 309 SECNMYCLDCNGTAAFCFYCRSSRRKDHYVIQIRRSSYHDVVRVAEIQ------------ 166
           SECNM+CLDCN T AFCFYCRS+R KDH VIQIRRSSYHDVVRVAEIQ            
Sbjct: 31  SECNMFCLDCN-TEAFCFYCRSTRHKDHSVIQIRRSSYHDVVRVAEIQKVLDITGVQTYV 89

Query: 165 --------------------RGVSYL*NLWQKS-LHTFRFCSLGCKL 88
                               +GV +L  +  +S L  FRFCSLGCKL
Sbjct: 90  INSARVLFLNERPQPKSSTSKGVPHLCEICGRSLLDPFRFCSLGCKL 136


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