BLASTX nr result

ID: Coptis24_contig00012107 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012107
         (266 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004140178.1| PREDICTED: cysteine desulfurase 2, chloropla...   161   6e-38
ref|XP_002523229.1| cysteine desulfurylase, putative [Ricinus co...   161   6e-38
ref|XP_002314018.1| predicted protein [Populus trichocarpa] gi|2...   160   8e-38
ref|NP_172325.2| cysteine desulfurase 2 [Arabidopsis thaliana] g...   159   2e-37
ref|XP_002892460.1| hypothetical protein ARALYDRAFT_470910 [Arab...   159   2e-37

>ref|XP_004140178.1| PREDICTED: cysteine desulfurase 2, chloroplastic-like [Cucumis
           sativus] gi|449481029|ref|XP_004156061.1| PREDICTED:
           cysteine desulfurase 2, chloroplastic-like [Cucumis
           sativus]
          Length = 485

 Score =  161 bits (407), Expect = 6e-38
 Identities = 78/88 (88%), Positives = 82/88 (93%)
 Frame = +3

Query: 3   MVVDVQSLDADFLVASSHKMCGPTGAGFLYGKSKILSGMPPFLGGGEMISDVFLDHSTYA 182
           MVVDVQ+LDADFLVASSHKMCGPTG GFLYGK  +LS MPPFLGGGEMISDVFLDHST+A
Sbjct: 279 MVVDVQALDADFLVASSHKMCGPTGIGFLYGKIDLLSAMPPFLGGGEMISDVFLDHSTFA 338

Query: 183 EPLSRFEAGTPAIGEVIGLGAAIDYLSG 266
           +P SRFEAGTPAIGE IGLGAAIDYLSG
Sbjct: 339 QPPSRFEAGTPAIGEAIGLGAAIDYLSG 366


>ref|XP_002523229.1| cysteine desulfurylase, putative [Ricinus communis]
           gi|223537525|gb|EEF39150.1| cysteine desulfurylase,
           putative [Ricinus communis]
          Length = 469

 Score =  161 bits (407), Expect = 6e-38
 Identities = 79/88 (89%), Positives = 81/88 (92%)
 Frame = +3

Query: 3   MVVDVQSLDADFLVASSHKMCGPTGAGFLYGKSKILSGMPPFLGGGEMISDVFLDHSTYA 182
           MVVDVQ LDADFLVASSHKMCGPTG GFLYGKS ILS MPPFLGGGEMI+DVFLDHSTYA
Sbjct: 263 MVVDVQGLDADFLVASSHKMCGPTGIGFLYGKSDILSTMPPFLGGGEMIADVFLDHSTYA 322

Query: 183 EPLSRFEAGTPAIGEVIGLGAAIDYLSG 266
           +P SRFEAGTPAIGE IGLGAAIDYL G
Sbjct: 323 DPPSRFEAGTPAIGEAIGLGAAIDYLLG 350


>ref|XP_002314018.1| predicted protein [Populus trichocarpa] gi|222850426|gb|EEE87973.1|
           predicted protein [Populus trichocarpa]
          Length = 469

 Score =  160 bits (406), Expect = 8e-38
 Identities = 79/88 (89%), Positives = 80/88 (90%)
 Frame = +3

Query: 3   MVVDVQSLDADFLVASSHKMCGPTGAGFLYGKSKILSGMPPFLGGGEMISDVFLDHSTYA 182
           M VDV+ LDADFLVASSHKMCGPTG GFLYGKS ILS MPPFLGGGEMISDVFLDHSTYA
Sbjct: 263 MPVDVRDLDADFLVASSHKMCGPTGVGFLYGKSDILSTMPPFLGGGEMISDVFLDHSTYA 322

Query: 183 EPLSRFEAGTPAIGEVIGLGAAIDYLSG 266
           EP SRFEAGTPAIGE IGLGAAIDYL G
Sbjct: 323 EPPSRFEAGTPAIGEAIGLGAAIDYLQG 350


>ref|NP_172325.2| cysteine desulfurase 2 [Arabidopsis thaliana]
           gi|75249321|sp|Q93WX6.1|NFS2_ARATH RecName:
           Full=Cysteine desulfurase 2, chloroplastic; AltName:
           Full=NIFS-like protein; AltName: Full=Plastid sufS-like
           protein; AltName: Full=Protein AtCpNifS; AltName:
           Full=Selenocysteine lyase; Flags: Precursor
           gi|16152176|gb|AAL14994.1|AF419347_1 NIFS-like protein
           CpNifsp precursor [Arabidopsis thaliana]
           gi|20453112|gb|AAM19798.1| At1g08490/T27G7_14
           [Arabidopsis thaliana] gi|23506185|gb|AAN31104.1|
           At1g08490/T27G7_14 [Arabidopsis thaliana]
           gi|27085243|gb|AAL79956.1| cysteine desulfurase
           [Arabidopsis thaliana] gi|332190177|gb|AEE28298.1|
           cysteine desulfurase 2 [Arabidopsis thaliana]
          Length = 463

 Score =  159 bits (402), Expect = 2e-37
 Identities = 77/88 (87%), Positives = 80/88 (90%)
 Frame = +3

Query: 3   MVVDVQSLDADFLVASSHKMCGPTGAGFLYGKSKILSGMPPFLGGGEMISDVFLDHSTYA 182
           MVVDVQ L+ADFLVASSHKMCGPTG GFLYGKS +L  MPPFLGGGEMISDVFLDHSTYA
Sbjct: 257 MVVDVQKLNADFLVASSHKMCGPTGIGFLYGKSDLLHSMPPFLGGGEMISDVFLDHSTYA 316

Query: 183 EPLSRFEAGTPAIGEVIGLGAAIDYLSG 266
           EP SRFEAGTPAIGE I LGAA+DYLSG
Sbjct: 317 EPPSRFEAGTPAIGEAIALGAAVDYLSG 344


>ref|XP_002892460.1| hypothetical protein ARALYDRAFT_470910 [Arabidopsis lyrata subsp.
           lyrata] gi|297338302|gb|EFH68719.1| hypothetical protein
           ARALYDRAFT_470910 [Arabidopsis lyrata subsp. lyrata]
          Length = 466

 Score =  159 bits (402), Expect = 2e-37
 Identities = 77/88 (87%), Positives = 80/88 (90%)
 Frame = +3

Query: 3   MVVDVQSLDADFLVASSHKMCGPTGAGFLYGKSKILSGMPPFLGGGEMISDVFLDHSTYA 182
           MVVDVQ L+ADFLVASSHKMCGPTG GFLYGKS +L  MPPFLGGGEMISDVFLDHSTYA
Sbjct: 260 MVVDVQKLNADFLVASSHKMCGPTGIGFLYGKSDLLHSMPPFLGGGEMISDVFLDHSTYA 319

Query: 183 EPLSRFEAGTPAIGEVIGLGAAIDYLSG 266
           EP SRFEAGTPAIGE I LGAA+DYLSG
Sbjct: 320 EPPSRFEAGTPAIGEAIALGAAVDYLSG 347


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