BLASTX nr result

ID: Coptis24_contig00012103 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012103
         (474 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266492.1| PREDICTED: histone deacetylase 9 [Vitis vini...   124   6e-27
emb|CAN77816.1| hypothetical protein VITISV_020659 [Vitis vinifera]   124   6e-27
dbj|BAF37798.1| hypothetical protein [Ipomoea trifida]                124   1e-26
ref|XP_002300554.1| histone deacetylase [Populus trichocarpa] gi...   123   2e-26
ref|XP_002270071.2| PREDICTED: histone deacetylase 9-like [Vitis...   122   2e-26

>ref|XP_002266492.1| PREDICTED: histone deacetylase 9 [Vitis vinifera]
           gi|297734674|emb|CBI16725.3| unnamed protein product
           [Vitis vinifera]
          Length = 430

 Score =  124 bits (312), Expect = 6e-27
 Identities = 59/65 (90%), Positives = 62/65 (95%)
 Frame = -1

Query: 474 ENLNSKSYISTIKAQVLESLRYIQHAPSVQMQEVPPDFYIPDFDEDDQNPDERVDQHTQD 295
           ENLNSKSYI TIK QVLE+LR IQHAPSVQMQEVPPDFYIPDFDED+QNPDERVDQHT+D
Sbjct: 348 ENLNSKSYIGTIKMQVLENLRCIQHAPSVQMQEVPPDFYIPDFDEDEQNPDERVDQHTRD 407

Query: 294 RQIQR 280
           RQIQR
Sbjct: 408 RQIQR 412


>emb|CAN77816.1| hypothetical protein VITISV_020659 [Vitis vinifera]
          Length = 430

 Score =  124 bits (312), Expect = 6e-27
 Identities = 59/65 (90%), Positives = 62/65 (95%)
 Frame = -1

Query: 474 ENLNSKSYISTIKAQVLESLRYIQHAPSVQMQEVPPDFYIPDFDEDDQNPDERVDQHTQD 295
           ENLNSKSYI TIK QVLE+LR IQHAPSVQMQEVPPDFYIPDFDED+QNPDERVDQHT+D
Sbjct: 348 ENLNSKSYIGTIKMQVLENLRCIQHAPSVQMQEVPPDFYIPDFDEDEQNPDERVDQHTRD 407

Query: 294 RQIQR 280
           RQIQR
Sbjct: 408 RQIQR 412


>dbj|BAF37798.1| hypothetical protein [Ipomoea trifida]
          Length = 496

 Score =  124 bits (310), Expect = 1e-26
 Identities = 57/65 (87%), Positives = 61/65 (93%)
 Frame = -1

Query: 474 ENLNSKSYISTIKAQVLESLRYIQHAPSVQMQEVPPDFYIPDFDEDDQNPDERVDQHTQD 295
           ENLNSKSY+ TIK  VLE+LRYIQHAPSVQMQEVPPDFYIPDFDED QNPDER+DQHTQD
Sbjct: 414 ENLNSKSYLGTIKTHVLENLRYIQHAPSVQMQEVPPDFYIPDFDEDTQNPDERLDQHTQD 473

Query: 294 RQIQR 280
           +QIQR
Sbjct: 474 KQIQR 478


>ref|XP_002300554.1| histone deacetylase [Populus trichocarpa]
           gi|222847812|gb|EEE85359.1| histone deacetylase [Populus
           trichocarpa]
          Length = 429

 Score =  123 bits (308), Expect = 2e-26
 Identities = 57/65 (87%), Positives = 63/65 (96%)
 Frame = -1

Query: 474 ENLNSKSYISTIKAQVLESLRYIQHAPSVQMQEVPPDFYIPDFDEDDQNPDERVDQHTQD 295
           ENLNSKSY+STIK QVLE+LR IQHAPSVQMQEVPPDF+IPDFDED+QNPDER+DQHTQD
Sbjct: 348 ENLNSKSYLSTIKMQVLENLRCIQHAPSVQMQEVPPDFFIPDFDEDEQNPDERMDQHTQD 407

Query: 294 RQIQR 280
           +QIQR
Sbjct: 408 KQIQR 412


>ref|XP_002270071.2| PREDICTED: histone deacetylase 9-like [Vitis vinifera]
          Length = 458

 Score =  122 bits (307), Expect = 2e-26
 Identities = 57/65 (87%), Positives = 62/65 (95%)
 Frame = -1

Query: 474 ENLNSKSYISTIKAQVLESLRYIQHAPSVQMQEVPPDFYIPDFDEDDQNPDERVDQHTQD 295
           ENLNSKSY+ TIK QVLE+LR IQHAPSVQMQEVPPDFYIPDFDED+QNPDERVDQHT+D
Sbjct: 376 ENLNSKSYLGTIKQQVLENLRCIQHAPSVQMQEVPPDFYIPDFDEDEQNPDERVDQHTKD 435

Query: 294 RQIQR 280
           +QIQR
Sbjct: 436 KQIQR 440


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