BLASTX nr result

ID: Coptis24_contig00012098 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012098
         (1694 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278544.1| PREDICTED: protein ABCI7, chloroplastic-like...   499   e-139
emb|CBI33903.3| unnamed protein product [Vitis vinifera]              499   e-139
emb|CAN69419.1| hypothetical protein VITISV_028794 [Vitis vinifera]   498   e-138
ref|XP_003631753.1| PREDICTED: LOW QUALITY PROTEIN: protein ABCI...   478   e-132
ref|XP_004148492.1| PREDICTED: protein ABCI7, chloroplastic-like...   473   e-131

>ref|XP_002278544.1| PREDICTED: protein ABCI7, chloroplastic-like [Vitis vinifera]
          Length = 495

 Score =  499 bits (1286), Expect = e-139
 Identities = 259/429 (60%), Positives = 319/429 (74%), Gaps = 3/429 (0%)
 Frame = +1

Query: 187  RIAETLEDXXXXXXXXXXXXXQKLRDTXXXXXXXXXXXXKKDEAFRFTDTSFIKTSQIKP 366
            +IAE+LED             QKLRD             +KDE FRFTDTS I+ SQ+ P
Sbjct: 62   QIAESLEDSLSSSSTSSPPPLQKLRDASSQTVLSTPWPSRKDEPFRFTDTSLIRYSQVTP 121

Query: 367  VSTP--SVTLPTDLAHTIFPKLVIIDGYIAGS-ERINELGSGVFVGSVNEIDCEVIKQRV 537
            +S P  S+ + TD   T FP L I+DG+I  S   +++L +GVFVGS++ +  E I ++V
Sbjct: 122  ISHPPTSIAISTD---TQFPNLSIVDGHIVYSLSNLSQLPTGVFVGSLSSLPSETITKKV 178

Query: 538  FEFVSEFQDGDLFWSLNGIGTPDVSVVYVPKECRVEIPLHLMFYSSESEDVGSNVLPVSN 717
             EFV+ F+ GDLFWSLNG+GTPD++VVYVP  CRVE+PLH+++YS E  D+GS  LPVSN
Sbjct: 179  SEFVANFE-GDLFWSLNGLGTPDMAVVYVPAGCRVEMPLHIVYYSVEGGDIGSKKLPVSN 237

Query: 718  PRVLVIVXXXXXXXXXXXYFGGDGKGCYWANSALEMFIGEGGKVTHSYIQRQGPNAAHTK 897
            PRV V+V           Y G     CYWAN+  E+ IGEG KV HSYIQ Q  +AAH K
Sbjct: 238  PRVFVLVEEGGEIGVIEEYVGVGENKCYWANTVTEVVIGEGAKVKHSYIQSQSLSAAHIK 297

Query: 898  WTVVRQETSSTYKLVEISTGGKLSRHNLHVQQVGGETITELSALHLCLHEQTQDLHSRLV 1077
            WT V+Q +SS+Y+L+E+STGGKLSRHN+++QQVG +T+TELSA HL + +QTQDLHSRLV
Sbjct: 298  WTSVQQGSSSSYELIEVSTGGKLSRHNVNIQQVGPDTVTELSAFHLSVGDQTQDLHSRLV 357

Query: 1078 LDHPRGTSQQLHKCIVAHSSGQAVFDGNIKVNRFAQQTNAGQMTRTLLLEPRATVNLKPN 1257
            LDHPRG S+QLHKCIVAHS GQAVFDGNIKVNR+AQ+T+AGQ+TR+LLLEPRATVN+KPN
Sbjct: 358  LDHPRGYSRQLHKCIVAHSLGQAVFDGNIKVNRYAQRTDAGQLTRSLLLEPRATVNVKPN 417

Query: 1258 LQIIADDVKCSHGAAISDLGKELKDQLFYFLARGINAETCKKALIFSFGAEVIARLPDKS 1437
            LQIIADDVKCSHGAAISDL    ++QLFYFLARGI+ ET +KALIFSFG EVI RLP  S
Sbjct: 418  LQIIADDVKCSHGAAISDLE---ENQLFYFLARGIDLETARKALIFSFGGEVIERLPYSS 474

Query: 1438 LRENTERHV 1464
            +R+  E H+
Sbjct: 475  IRKKVETHI 483


>emb|CBI33903.3| unnamed protein product [Vitis vinifera]
          Length = 480

 Score =  499 bits (1286), Expect = e-139
 Identities = 259/429 (60%), Positives = 319/429 (74%), Gaps = 3/429 (0%)
 Frame = +1

Query: 187  RIAETLEDXXXXXXXXXXXXXQKLRDTXXXXXXXXXXXXKKDEAFRFTDTSFIKTSQIKP 366
            +IAE+LED             QKLRD             +KDE FRFTDTS I+ SQ+ P
Sbjct: 47   QIAESLEDSLSSSSTSSPPPLQKLRDASSQTVLSTPWPSRKDEPFRFTDTSLIRYSQVTP 106

Query: 367  VSTP--SVTLPTDLAHTIFPKLVIIDGYIAGS-ERINELGSGVFVGSVNEIDCEVIKQRV 537
            +S P  S+ + TD   T FP L I+DG+I  S   +++L +GVFVGS++ +  E I ++V
Sbjct: 107  ISHPPTSIAISTD---TQFPNLSIVDGHIVYSLSNLSQLPTGVFVGSLSSLPSETITKKV 163

Query: 538  FEFVSEFQDGDLFWSLNGIGTPDVSVVYVPKECRVEIPLHLMFYSSESEDVGSNVLPVSN 717
             EFV+ F+ GDLFWSLNG+GTPD++VVYVP  CRVE+PLH+++YS E  D+GS  LPVSN
Sbjct: 164  SEFVANFE-GDLFWSLNGLGTPDMAVVYVPAGCRVEMPLHIVYYSVEGGDIGSKKLPVSN 222

Query: 718  PRVLVIVXXXXXXXXXXXYFGGDGKGCYWANSALEMFIGEGGKVTHSYIQRQGPNAAHTK 897
            PRV V+V           Y G     CYWAN+  E+ IGEG KV HSYIQ Q  +AAH K
Sbjct: 223  PRVFVLVEEGGEIGVIEEYVGVGENKCYWANTVTEVVIGEGAKVKHSYIQSQSLSAAHIK 282

Query: 898  WTVVRQETSSTYKLVEISTGGKLSRHNLHVQQVGGETITELSALHLCLHEQTQDLHSRLV 1077
            WT V+Q +SS+Y+L+E+STGGKLSRHN+++QQVG +T+TELSA HL + +QTQDLHSRLV
Sbjct: 283  WTSVQQGSSSSYELIEVSTGGKLSRHNVNIQQVGPDTVTELSAFHLSVGDQTQDLHSRLV 342

Query: 1078 LDHPRGTSQQLHKCIVAHSSGQAVFDGNIKVNRFAQQTNAGQMTRTLLLEPRATVNLKPN 1257
            LDHPRG S+QLHKCIVAHS GQAVFDGNIKVNR+AQ+T+AGQ+TR+LLLEPRATVN+KPN
Sbjct: 343  LDHPRGYSRQLHKCIVAHSLGQAVFDGNIKVNRYAQRTDAGQLTRSLLLEPRATVNVKPN 402

Query: 1258 LQIIADDVKCSHGAAISDLGKELKDQLFYFLARGINAETCKKALIFSFGAEVIARLPDKS 1437
            LQIIADDVKCSHGAAISDL    ++QLFYFLARGI+ ET +KALIFSFG EVI RLP  S
Sbjct: 403  LQIIADDVKCSHGAAISDLE---ENQLFYFLARGIDLETARKALIFSFGGEVIERLPYSS 459

Query: 1438 LRENTERHV 1464
            +R+  E H+
Sbjct: 460  IRKKVETHI 468


>emb|CAN69419.1| hypothetical protein VITISV_028794 [Vitis vinifera]
          Length = 593

 Score =  498 bits (1283), Expect = e-138
 Identities = 259/429 (60%), Positives = 318/429 (74%), Gaps = 3/429 (0%)
 Frame = +1

Query: 187  RIAETLEDXXXXXXXXXXXXXQKLRDTXXXXXXXXXXXXKKDEAFRFTDTSFIKTSQIKP 366
            +IAE+LED             QKLRD             +KDE FRFTDTS I+ SQ+ P
Sbjct: 62   QIAESLEDSLSSSSTSSPPPLQKLRDASSQTVLSTPWPSRKDEPFRFTDTSLIRYSQVTP 121

Query: 367  VSTP--SVTLPTDLAHTIFPKLVIIDGYIAGS-ERINELGSGVFVGSVNEIDCEVIKQRV 537
            +S P  S+ + TD   T FP L I+DG+I  S   +++L +GVFVGS++ +  E I + V
Sbjct: 122  ISHPPTSIAISTD---TQFPNLSIVDGHIVYSLSNLSQLPTGVFVGSLSSLPSETITKXV 178

Query: 538  FEFVSEFQDGDLFWSLNGIGTPDVSVVYVPKECRVEIPLHLMFYSSESEDVGSNVLPVSN 717
             EFV+ F+ GDLFWSLNG+GTPD++VVYVP  CRVE+PLH+++YS E  D+GS  LPVSN
Sbjct: 179  SEFVANFE-GDLFWSLNGLGTPDMAVVYVPAGCRVEMPLHIVYYSVEGGDIGSKKLPVSN 237

Query: 718  PRVLVIVXXXXXXXXXXXYFGGDGKGCYWANSALEMFIGEGGKVTHSYIQRQGPNAAHTK 897
            PRV V+V           Y G     CYWAN+  E+ IGEG KV HSYIQ Q  +AAH K
Sbjct: 238  PRVFVLVEEGGEIGVIEEYVGVGENKCYWANTVTEVVIGEGAKVKHSYIQSQSLSAAHIK 297

Query: 898  WTVVRQETSSTYKLVEISTGGKLSRHNLHVQQVGGETITELSALHLCLHEQTQDLHSRLV 1077
            WT V+Q +SS+Y+L+E+STGGKLSRHN+++QQVG +T+TELSA HL + +QTQDLHSRLV
Sbjct: 298  WTSVQQGSSSSYELIEVSTGGKLSRHNVNIQQVGPDTVTELSAFHLSVGDQTQDLHSRLV 357

Query: 1078 LDHPRGTSQQLHKCIVAHSSGQAVFDGNIKVNRFAQQTNAGQMTRTLLLEPRATVNLKPN 1257
            LDHPRG S+QLHKCIVAHS GQAVFDGNIKVNR+AQ+T+AGQ+TR+LLLEPRATVN+KPN
Sbjct: 358  LDHPRGYSRQLHKCIVAHSLGQAVFDGNIKVNRYAQRTDAGQLTRSLLLEPRATVNVKPN 417

Query: 1258 LQIIADDVKCSHGAAISDLGKELKDQLFYFLARGINAETCKKALIFSFGAEVIARLPDKS 1437
            LQIIADDVKCSHGAAISDL    ++QLFYFLARGI+ ET +KALIFSFG EVI RLP  S
Sbjct: 418  LQIIADDVKCSHGAAISDLE---ENQLFYFLARGIDLETARKALIFSFGGEVIERLPYSS 474

Query: 1438 LRENTERHV 1464
            +R+  E H+
Sbjct: 475  IRKKVETHI 483


>ref|XP_003631753.1| PREDICTED: LOW QUALITY PROTEIN: protein ABCI7, chloroplastic-like
            [Vitis vinifera]
          Length = 527

 Score =  478 bits (1230), Expect = e-132
 Identities = 253/435 (58%), Positives = 312/435 (71%), Gaps = 9/435 (2%)
 Frame = +1

Query: 187  RIAETLEDXXXXXXXXXXXXXQKLRDTXXXXXXXXXXXXKKDEAFRFTDTSFIKTSQIKP 366
            +IAE+LED             QKLRD             +KDE FRFTDTS I+ SQ+ P
Sbjct: 47   QIAESLEDSLSSSSTSSPPPLQKLRDASSQTVLSTPWPSRKDEPFRFTDTSLIRYSQVTP 106

Query: 367  VSTP--SVTLPTDLAHTIFPKLVIIDGYIAGS-ERINELGSGVFVGSVNEIDCEVIKQRV 537
            +S P  S+ + TD   T FP L I+DG+I  S   +++L +GVFVGS++ +  E I +RV
Sbjct: 107  ISHPPTSIAISTD---TQFPNLCIVDGHIIYSLSNLSQLPTGVFVGSLSSLPSETITKRV 163

Query: 538  FEFVSEFQDGDLFWSLNGIGTPDVSVVYVPKECRVEIPLHLMFYSSESEDVGSNVLPVSN 717
             EFV+ F+ GDLFWSLNG+GT D+ VVYVP  CRVE+PLH+++ S E  D+G   LPVSN
Sbjct: 164  SEFVANFE-GDLFWSLNGLGTLDMVVVYVPAGCRVEMPLHIVYXSVEGGDIGFKKLPVSN 222

Query: 718  PRVLVIVXXXXXXXXXXXYFGGDGKGCYWANSALE------MFIGEGGKVTHSYIQRQGP 879
            PRV V+V           + GG    CYWAN+  E      + IGEG KV HSYIQ Q  
Sbjct: 223  PRVFVLVEEGGEIGEIEEFVGGGENKCYWANAVTEVRIIIILVIGEGAKVKHSYIQSQSL 282

Query: 880  NAAHTKWTVVRQETSSTYKLVEISTGGKLSRHNLHVQQVGGETITELSALHLCLHEQTQD 1059
            +AAH KWT V+Q +S +Y+L+E+STGGKLSRHN+++QQVG +T+TELSA HL + + TQD
Sbjct: 283  SAAHIKWTSVQQGSSGSYELIEVSTGGKLSRHNVNIQQVGPDTVTELSAFHLSVGDPTQD 342

Query: 1060 LHSRLVLDHPRGTSQQLHKCIVAHSSGQAVFDGNIKVNRFAQQTNAGQMTRTLLLEPRAT 1239
            LH+RLVLDHPRG  +QLHKCIVAHS GQAVFDGNIKVNR+AQQT+AGQ+TR+LLLEPRAT
Sbjct: 343  LHTRLVLDHPRGYFRQLHKCIVAHSLGQAVFDGNIKVNRYAQQTDAGQLTRSLLLEPRAT 402

Query: 1240 VNLKPNLQIIADDVKCSHGAAISDLGKELKDQLFYFLARGINAETCKKALIFSFGAEVIA 1419
            VN+KPNLQIIADDVKCSHGAAISDL    ++QLFYFLARGI+ ET +K LIFSFG EVI 
Sbjct: 403  VNVKPNLQIIADDVKCSHGAAISDLE---ENQLFYFLARGIDLETARKTLIFSFGDEVIE 459

Query: 1420 RLPDKSLRENTERHV 1464
            RLP  S+R+  E H+
Sbjct: 460  RLPYSSIRKKVETHI 474


>ref|XP_004148492.1| PREDICTED: protein ABCI7, chloroplastic-like [Cucumis sativus]
            gi|449521999|ref|XP_004168016.1| PREDICTED: protein
            ABCI7, chloroplastic-like [Cucumis sativus]
          Length = 496

 Score =  473 bits (1218), Expect = e-131
 Identities = 261/484 (53%), Positives = 315/484 (65%), Gaps = 18/484 (3%)
 Frame = +1

Query: 67   TFTQLFLPNSPTPSFS-----------KPRFKHI---KAXXXXXXXXXXXXXXXRIAETL 204
            TFT       PTPS S           KP+F  I   +                ++AETL
Sbjct: 5    TFTPHIGGRLPTPSLSVSSSYSSTSKRKPKFNSITTTRVSLQASTPSLSDPFVLQLAETL 64

Query: 205  EDXXXXXXXXXXXXX-QKLRDTXXXXXXXXXXXXKKDEAFRFTDTSFIKTSQIKPVSTPS 381
            ED              QKLR++            ++DE FRFTD SFIK SQI P+S P 
Sbjct: 65   EDSLSSSSSSSSPFPLQKLRESSAENLLSTPWPSRRDEPFRFTDVSFIKQSQIHPISNPP 124

Query: 382  V--TLPTDLAHTIFPKLVIIDGYIAGS-ERINELGSGVFVGSVNEIDCEVIKQRVFEFVS 552
                L +    T F  +VI+DG+   S   + EL +GV+VGS  ++  E + +RV EFV 
Sbjct: 125  QFSELSSIPLETQFANVVIVDGHFVNSVSNLTELPNGVYVGSFIDLPSESVGKRVSEFVD 184

Query: 553  EFQDGDLFWSLNGIGTPDVSVVYVPKECRVEIPLHLMFYSSESEDVGSNVLPVSNPRVLV 732
                GDLFWS+NG+G PD++VVYVP  C+VE P+H  +YS    D GS  L VSNPRVLV
Sbjct: 185  GKFAGDLFWSINGVGAPDLTVVYVPAGCKVENPIHFRYYSINGGDEGSKELAVSNPRVLV 244

Query: 733  IVXXXXXXXXXXXYFGGDGKGCYWANSALEMFIGEGGKVTHSYIQRQGPNAAHTKWTVVR 912
            +V           +  GDG   YW+N  LE+ IG GGKV HSYIQ Q  NAAH KWT V+
Sbjct: 245  LVENGGEIEIIEEFLSGDGGKSYWSNPVLEVVIGSGGKVKHSYIQNQSLNAAHIKWTSVQ 304

Query: 913  QETSSTYKLVEISTGGKLSRHNLHVQQVGGETITELSALHLCLHEQTQDLHSRLVLDHPR 1092
            QE++S Y+LVEISTGG+LSRHN+H+QQ+G ET TELS LHL +  QTQDLHS LVLDHPR
Sbjct: 305  QESTSAYELVEISTGGRLSRHNVHIQQLGPETTTELSTLHLSIGNQTQDLHSSLVLDHPR 364

Query: 1093 GTSQQLHKCIVAHSSGQAVFDGNIKVNRFAQQTNAGQMTRTLLLEPRATVNLKPNLQIIA 1272
            G S+QLHKCIVA+  GQAVFDGN+KVNR+AQQT+AGQ+TR+LLLEPRATVN+KPNLQIIA
Sbjct: 365  GYSRQLHKCIVANPQGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIA 424

Query: 1273 DDVKCSHGAAISDLGKELKDQLFYFLARGINAETCKKALIFSFGAEVIARLPDKSLRENT 1452
            DDVKCSHGAAISDL    + QLFYF ARGI+ ET +KALIFSFGAEVI RLP  S+R+  
Sbjct: 425  DDVKCSHGAAISDLE---ETQLFYFQARGIDLETARKALIFSFGAEVIERLPSPSVRKRV 481

Query: 1453 ERHV 1464
            E H+
Sbjct: 482  ENHI 485


Top