BLASTX nr result
ID: Coptis24_contig00012092
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00012092 (1799 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI19776.3| unnamed protein product [Vitis vinifera] 642 0.0 ref|XP_002280904.2| PREDICTED: GTPase obg-like [Vitis vinifera] 622 e-176 dbj|BAJ53171.1| JHL18I08.5 [Jatropha curcas] 612 e-173 ref|XP_004147844.1| PREDICTED: GTPase obg-like [Cucumis sativus]... 611 e-172 ref|XP_002510461.1| GTP-dependent nucleic acid-binding protein e... 603 e-170 >emb|CBI19776.3| unnamed protein product [Vitis vinifera] Length = 509 Score = 642 bits (1657), Expect = 0.0 Identities = 337/466 (72%), Positives = 380/466 (81%), Gaps = 11/466 (2%) Frame = -3 Query: 1641 GYQLLKCRVAK--------VKEEPTSDPYTLIKEPHKYFDQVFITVRSGDGGHGAILSMP 1486 G LKCR+ + KE P+ P +LI+EPHKYFDQV ITVRSGDGGHGAILSMP Sbjct: 44 GQYTLKCRLTREKESPSLRTKESPSPGPSSLIREPHKYFDQVLITVRSGDGGHGAILSMP 103 Query: 1485 TPKVSSKSSHGKNDQEKKRK-GLYKRNSDGSLILPMGGHGADVVIYADEGKDTLLEFHKK 1309 + SK GK+D++K RK YKR+ DGSLILPMGGHG V+IYADEG+D+LLEFHKK Sbjct: 104 NQRAPSKPQ-GKHDKDKMRKKSSYKRDFDGSLILPMGGHGGGVIIYADEGEDSLLEFHKK 162 Query: 1308 KRYNAKRGGNVDAMGVLTSQLHDGFAGPTLRIPVPAGTVVKRKKGTTLADLANPGDEVLV 1129 R+NAKRGGNVDAMGVLTSQLHDG A PTLRIPVP GTVVKRK+G LADLA PGDE+LV Sbjct: 163 SRHNAKRGGNVDAMGVLTSQLHDGLAAPTLRIPVPVGTVVKRKRGKLLADLAQPGDEILV 222 Query: 1128 ARGGQGGISLLEMPEHRRKKLTDLTSNVIRDENDKVFVLGQPGEEVSLELILRVVADVGL 949 ARGGQGGISL+EMPEH+RKKL LT+NV+RD+NDKV VLGQPGEEVSLELILRVVADVGL Sbjct: 223 ARGGQGGISLIEMPEHKRKKLMALTTNVMRDDNDKVLVLGQPGEEVSLELILRVVADVGL 282 Query: 948 VGLPNAGKSTLLASITLARPDIANYPFTTLMPNLGRLDGDPSLGAGKYSSEATLADLPGL 769 VGLPNAGKSTLLA+ITLA+PDIA+YPFTTLMPNLGRLDGDPSLGAGKYSSEATLADLPGL Sbjct: 283 VGLPNAGKSTLLAAITLAKPDIADYPFTTLMPNLGRLDGDPSLGAGKYSSEATLADLPGL 342 Query: 768 IEGAHLGKGLGRNFXXXXXXXXXXXXXVDAASEDPVKDYITVKEELRMYNPEYLERPYIV 589 IEGAHLGKGLGRNF VDAA+EDPVKDY TVKEELRMYNP YLERPY+V Sbjct: 343 IEGAHLGKGLGRNFLRHLRRTRLLVHVVDAAAEDPVKDYRTVKEELRMYNPNYLERPYVV 402 Query: 588 VLNKIDLPEARVRLPSLVEEISMIGCKGAPSKPKRTFQEVVQPLPLLSENAST-PLEPLT 412 VLNKID+P+A RLPSL +EI IG + PS + ++ +Q LP SE A+ L+ Sbjct: 403 VLNKIDIPKAMDRLPSLTQEIMKIGSEQIPSSSQNGTEDAIQSLPSDSEGANVLSLDFPD 462 Query: 411 RD-KEKGIEDYPRPLSVVGVSVLKGDRIDEMLKEIRAALRKCQGSD 277 +D K+K IEDYP PL+VVGVSVLKG R++EMLKEIRAALRKCQ ++ Sbjct: 463 KDRKDKEIEDYPWPLAVVGVSVLKGIRVNEMLKEIRAALRKCQDAN 508 >ref|XP_002280904.2| PREDICTED: GTPase obg-like [Vitis vinifera] Length = 614 Score = 622 bits (1605), Expect = e-176 Identities = 330/464 (71%), Positives = 366/464 (78%), Gaps = 9/464 (1%) Frame = -3 Query: 1641 GYQLLKCRVAK--------VKEEPTSDPYTLIKEPHKYFDQVFITVRSGDGGHGAILSMP 1486 G LKCR+ + KE P+ P +LI+EPHKYFDQV ITVRSGDGGHGAILSMP Sbjct: 173 GQYTLKCRLTREKESPSLRTKESPSPGPSSLIREPHKYFDQVLITVRSGDGGHGAILSMP 232 Query: 1485 TPKVSSKSSHGKNDQEKKRK-GLYKRNSDGSLILPMGGHGADVVIYADEGKDTLLEFHKK 1309 + SK GK+D++K RK YKR+ DGSLILPMGGHG V+IYADEG+D+LLEFHKK Sbjct: 233 NQRAPSKPQ-GKHDKDKMRKKSSYKRDFDGSLILPMGGHGGGVIIYADEGEDSLLEFHKK 291 Query: 1308 KRYNAKRGGNVDAMGVLTSQLHDGFAGPTLRIPVPAGTVVKRKKGTTLADLANPGDEVLV 1129 R+NAKRGGNVDAMGVLTSQLHDG A PTLRIPVP GTVVKRK+G LADLA PGDE+LV Sbjct: 292 SRHNAKRGGNVDAMGVLTSQLHDGLAAPTLRIPVPVGTVVKRKRGKLLADLAQPGDEILV 351 Query: 1128 ARGGQGGISLLEMPEHRRKKLTDLTSNVIRDENDKVFVLGQPGEEVSLELILRVVADVGL 949 ARGGQGGISL+EMPEH+RKKL LT+NV+RD+NDKV VLGQPGEEVSLELILRVVADVGL Sbjct: 352 ARGGQGGISLIEMPEHKRKKLMALTTNVMRDDNDKVLVLGQPGEEVSLELILRVVADVGL 411 Query: 948 VGLPNAGKSTLLASITLARPDIANYPFTTLMPNLGRLDGDPSLGAGKYSSEATLADLPGL 769 VGLPNAGKSTLLA+ITLA+PDIA+YPFTTLMPNLGRLDGDPSLGAGKYSSEATLADLPGL Sbjct: 412 VGLPNAGKSTLLAAITLAKPDIADYPFTTLMPNLGRLDGDPSLGAGKYSSEATLADLPGL 471 Query: 768 IEGAHLGKGLGRNFXXXXXXXXXXXXXVDAASEDPVKDYITVKEELRMYNPEYLERPYIV 589 IEGAHLGKGLGRNF VDAA+EDPVKDY TVKEELRMYNP YLERPY+V Sbjct: 472 IEGAHLGKGLGRNFLRHLRRTRLLVHVVDAAAEDPVKDYRTVKEELRMYNPNYLERPYVV 531 Query: 588 VLNKIDLPEARVRLPSLVEEISMIGCKGAPSKPKRTFQEVVQPLPLLSENASTPLEPLTR 409 VLNKID+P+A RLPSL +EI IG S N + P Sbjct: 532 VLNKIDIPKAMDRLPSLTQEIMKIG----------------------SANVLSLDFPDKD 569 Query: 408 DKEKGIEDYPRPLSVVGVSVLKGDRIDEMLKEIRAALRKCQGSD 277 K+K IEDYP PL+VVGVSVLKG R++EMLKEIRAALRKCQ ++ Sbjct: 570 RKDKEIEDYPWPLAVVGVSVLKGIRVNEMLKEIRAALRKCQDAN 613 Score = 189 bits (479), Expect = 3e-45 Identities = 103/182 (56%), Positives = 125/182 (68%), Gaps = 1/182 (0%) Frame = -3 Query: 1644 IGYQLLKCRVAKVKEEPTSDPYTLIKEPHKYFDQVFITVRSGDGGHGAILSMPTPKVSSK 1465 +G KCR+ + KE P+ P +LI+EP KYFDQV ITV SG+GGHGAILSM + S+ Sbjct: 2 VGSTHFKCRLTRAKESPSPGPSSLIREPQKYFDQVIITVCSGNGGHGAILSMLNQRAPSR 61 Query: 1464 SSHGKNDQEKKRK-GLYKRNSDGSLILPMGGHGADVVIYADEGKDTLLEFHKKKRYNAKR 1288 G++D+ K RK L KR+ + DEG+D+LLEFHK RYNAKR Sbjct: 62 PQ-GRHDKGKMRKKSLLKRD------------------FEDEGEDSLLEFHKS-RYNAKR 101 Query: 1287 GGNVDAMGVLTSQLHDGFAGPTLRIPVPAGTVVKRKKGTTLADLANPGDEVLVARGGQGG 1108 GGNVDAMGVLTS+LHDG A PTLR PVP GTVVKRK+G ADLA PG+E+L+ARG QGG Sbjct: 102 GGNVDAMGVLTSELHDGLAAPTLRNPVPVGTVVKRKRGKLPADLAEPGNEILMARGRQGG 161 Query: 1107 IS 1102 + Sbjct: 162 FN 163 >dbj|BAJ53171.1| JHL18I08.5 [Jatropha curcas] Length = 504 Score = 612 bits (1579), Expect = e-173 Identities = 323/460 (70%), Positives = 366/460 (79%), Gaps = 7/460 (1%) Frame = -3 Query: 1629 LKCRVAKVKEEPTSDPYTLIKEPHKYFDQVFITVRSGDGGHGAILSMPTPKVSSKSSHGK 1450 +KCRV + KE P+++ +L++EPHKYFDQV ITVRSGDGGHGAILSMP + S S G Sbjct: 47 IKCRVTRPKEAPSANLASLVREPHKYFDQVIITVRSGDGGHGAILSMPNQR--SPKSKGS 104 Query: 1449 NDQEKKR-KGLYKRNSDGSLILPMGGHGADVVIYADEGKDTLLEFHKKKRYNAKRGGNVD 1273 D++K K YKR+ DGSLILPMGGHG D+V+YADEGKD+LLEFH K +NAKRGGNVD Sbjct: 105 WDKDKTSYKSSYKRDFDGSLILPMGGHGGDIVVYADEGKDSLLEFHTKSSFNAKRGGNVD 164 Query: 1272 AMGVLTSQLHDGFAGPTLRIPVPAGTVVKRKKGTTLADLANPGDEVLVARGGQGGISLLE 1093 MGVLTSQLHDGFA PTLRI VP GTVVK K+G LADLA PGDE+LVARGGQGGISLL+ Sbjct: 165 GMGVLTSQLHDGFAAPTLRIAVPLGTVVKHKRGKLLADLAQPGDEILVARGGQGGISLLK 224 Query: 1092 MPEHRRKKLTDLTSNVIRDENDKVFVLGQPGEEVSLELILRVVADVGLVGLPNAGKSTLL 913 +PEHRRK+L LT+NV+RD+ DKV +LGQPGEEVSLELILRVVADVGLVGLPNAGKSTLL Sbjct: 225 VPEHRRKRLMTLTTNVLRDDGDKVLILGQPGEEVSLELILRVVADVGLVGLPNAGKSTLL 284 Query: 912 ASITLARPDIANYPFTTLMPNLGRLDGDPSLGAGKYSSEATLADLPGLIEGAHLGKGLGR 733 A+IT A+PDIA+YPFTTLMPNLGRLDGDP+LGAG YSSEATLADLPGL+EGAHLGKGLGR Sbjct: 285 AAITRAKPDIADYPFTTLMPNLGRLDGDPTLGAGMYSSEATLADLPGLVEGAHLGKGLGR 344 Query: 732 NFXXXXXXXXXXXXXVDAASEDPVKDYITVKEELRMYNPEYLERPYIVVLNKIDLPEARV 553 NF VDAA+EDPV DYITVKEELRMYNPEYLERPYIVVLNKIDLPEAR Sbjct: 345 NFLRHLRRTRVLVHVVDAAAEDPVNDYITVKEELRMYNPEYLERPYIVVLNKIDLPEARD 404 Query: 552 RLPSLVEEISMIGCKGAPSKPKRTFQEVVQPLPLLSENASTPLEPLTR------DKEKGI 391 RL SL EEIS IG PS+ QEVV + L+ + +K I Sbjct: 405 RLSSLAEEISRIGRDEVPSE-----QEVVVNDAFHTSTRYDVANKLSSQISNGDNNDKMI 459 Query: 390 EDYPRPLSVVGVSVLKGDRIDEMLKEIRAALRKCQGSDKA 271 EDYP PL+VVGVSVLKG R++EMLKEIRAAL+KC+ ++A Sbjct: 460 EDYPAPLAVVGVSVLKGIRVNEMLKEIRAALKKCRDYNEA 499 >ref|XP_004147844.1| PREDICTED: GTPase obg-like [Cucumis sativus] gi|449521477|ref|XP_004167756.1| PREDICTED: GTPase obg-like [Cucumis sativus] Length = 503 Score = 611 bits (1576), Expect = e-172 Identities = 322/460 (70%), Positives = 370/460 (80%), Gaps = 3/460 (0%) Frame = -3 Query: 1647 NIGYQLLKCRVAKVKEEPTSDPYTLIKEPHKYFDQVFITVRSGDGGHGAILSMPTPKVS- 1471 N Y +KC++A+V + +++P TL KE HKYFDQ ITVRSGDGGHG +LSMP + S Sbjct: 38 NSSYCTIKCKLARVVDS-SANPATLTKEAHKYFDQAIITVRSGDGGHGTVLSMPNQQTSK 96 Query: 1470 SKSSHGKNDQEKKRKGLYKRNSDGSLILPMGGHGADVVIYADEGKDTLLEFHKKKRYNAK 1291 S+ +GK ++ K+K LYKR+ DGSLILPMGG G DVVIYADEGKD+LLEFH K RYNAK Sbjct: 97 SQGRNGKEKEKAKKKSLYKRDFDGSLILPMGGRGGDVVIYADEGKDSLLEFHTKSRYNAK 156 Query: 1290 RGGNVDAMGVLTSQLHDGFAGPTLRIPVPAGTVVKRKKGTTLADLANPGDEVLVARGGQG 1111 RGGNVDAMGVLTSQLH+GFA PTLRIPVP GTVVKRK+G LADL +PGDE+LVARGGQG Sbjct: 157 RGGNVDAMGVLTSQLHNGFAAPTLRIPVPIGTVVKRKRGKLLADLVHPGDEILVARGGQG 216 Query: 1110 GISLLEMPEHRRKKLTDLTSNVIRDENDKVFVLGQPGEEVSLELILRVVADVGLVGLPNA 931 GISL++ PE+R+KK+ LTSNV+RDE+DKV V GQPGEEVSLELILRVVADVGLVGLPNA Sbjct: 217 GISLIDTPENRKKKMMSLTSNVMRDESDKVLVFGQPGEEVSLELILRVVADVGLVGLPNA 276 Query: 930 GKSTLLASITLARPDIANYPFTTLMPNLGRLDGDPSLGAGKYSSEATLADLPGLIEGAHL 751 GKSTLLA+ITLA+PDIA+YPFTTL+PNLGRLDGDPSLGAG Y SEATLADLPGLIEGAHL Sbjct: 277 GKSTLLAAITLAKPDIADYPFTTLIPNLGRLDGDPSLGAGMYQSEATLADLPGLIEGAHL 336 Query: 750 GKGLGRNFXXXXXXXXXXXXXVDAASEDPVKDYITVKEELRMYNPEYLERPYIVVLNKID 571 GKGLGRNF VDAA+++PV DY TV+EELRMYNP YL RPY+VVLNKID Sbjct: 337 GKGLGRNFLRHLRRTRLLVHVVDAAAQNPVDDYRTVREELRMYNPNYLGRPYVVVLNKID 396 Query: 570 LPEARVRLPSLVEEISMIGCKGAPSKPKRTFQEVVQPLPLLSENASTP-LE-PLTRDKEK 397 LPEA+ RLPS+ EEI IG + + + VQ L + A+ P LE P+ +K+K Sbjct: 397 LPEAKNRLPSVTEEILRIGTDDRYPEQMGS-ENSVQSSVLEDDLATVPSLEIPVADEKDK 455 Query: 396 GIEDYPRPLSVVGVSVLKGDRIDEMLKEIRAALRKCQGSD 277 IEDYPRPLSVVGVSVLKG I MLKEIRAALRKC+ SD Sbjct: 456 EIEDYPRPLSVVGVSVLKGINISLMLKEIRAALRKCRDSD 495 >ref|XP_002510461.1| GTP-dependent nucleic acid-binding protein engD, putative [Ricinus communis] gi|223551162|gb|EEF52648.1| GTP-dependent nucleic acid-binding protein engD, putative [Ricinus communis] Length = 474 Score = 603 bits (1554), Expect = e-170 Identities = 330/505 (65%), Positives = 376/505 (74%), Gaps = 1/505 (0%) Frame = -3 Query: 1782 MAYLVTQFSSSLNLKQLRKEEPFNSFLTARLPLLQRVDWPNNRSQNIGYQLLKCRVAKVK 1603 MAY+ T SSS Q ++ L A L L +R NN+S + + CR++K+K Sbjct: 1 MAYVATIPSSSFLSLQFCSDK----LLFAHL-LPERCCQRNNKSDTLRTYKVSCRISKLK 55 Query: 1602 EEPTSDPYTLIKEPHKYFDQVFITVRSGDGGHGAILSMPTPKVSSKSSHGKNDQEKKRKG 1423 E P P + I+EPHKYFDQV ITVRSGDGGHGAIL+MP P+ KSS K+ +++ +K Sbjct: 56 EAP---PASFIREPHKYFDQVIITVRSGDGGHGAILNMPQPQ--QKSSDVKSKKKQNKKS 110 Query: 1422 LYKRNSDGSLILPMGGHGADVVIYADEGKDTLLEFHKKKRYNAKRGGNVDAMGVLTSQLH 1243 YKR+ DGSLILPMGGHG DVVIYADEGKD LLEFH K R+NAKRGGNVDAMGVL S LH Sbjct: 111 SYKRDFDGSLILPMGGHGGDVVIYADEGKDFLLEFHSKSRFNAKRGGNVDAMGVLNSLLH 170 Query: 1242 DGFAGPTLRIPVPAGTVVKRKKGTTLADLANPGDEVLVARGGQGGISLLEMPEHRRKKLT 1063 DGFA PTLRIPVP GTVVK K+G LADL PGDE+LVARGGQGGISLL+ PEHRRK+L Sbjct: 171 DGFAAPTLRIPVPVGTVVKHKRGKLLADLTQPGDEILVARGGQGGISLLDAPEHRRKRLM 230 Query: 1062 DLTSNVIRDENDKVFVLGQPGEEVSLELILRVVADVGLVGLPNAGKSTLLASITLARPDI 883 LT+NV+RD++DKV VLGQPGEEV+LELILRVVADVGLVGLPNAGKSTLLA+IT ARPDI Sbjct: 231 ALTTNVLRDDSDKVLVLGQPGEEVNLELILRVVADVGLVGLPNAGKSTLLAAITHARPDI 290 Query: 882 ANYPFTTLMPNLGRLDGDPSLGAGKYSSEATLADLPGLIEGAHLGKGLGRNFXXXXXXXX 703 A+YPFTTLMPNLGRLDGDP+LGA YSSEATLADLPGLIEGAHLGKGLGRNF Sbjct: 291 ADYPFTTLMPNLGRLDGDPTLGAAMYSSEATLADLPGLIEGAHLGKGLGRNFLRHLRRTR 350 Query: 702 XXXXXVDAASEDPVKDYITVKEELRMYNPEYLERPYIVVLNKIDLPEARVRLPSLVEEIS 523 VDAA+EDPV DY TVKEELRMYNPEYLERP++VVLNKIDLP A+ RL SL EEIS Sbjct: 351 LLVHVVDAAAEDPVNDYRTVKEELRMYNPEYLERPHVVVLNKIDLPGAKDRLSSLTEEIS 410 Query: 522 MIGCKGAPSKPKRTFQEVVQPLPLLSENASTPLEPLTRDK-EKGIEDYPRPLSVVGVSVL 346 IG E D+ +K IEDYP PL+VVGVSVL Sbjct: 411 EIGSS----------------------------EIFNGDRNDKEIEDYPAPLAVVGVSVL 442 Query: 345 KGDRIDEMLKEIRAALRKCQGSDKA 271 KG R++EMLKEIR AL+ C+ S++A Sbjct: 443 KGIRVNEMLKEIRTALKNCRDSNEA 467