BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012092
         (1799 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19776.3| unnamed protein product [Vitis vinifera]              642   0.0  
ref|XP_002280904.2| PREDICTED: GTPase obg-like [Vitis vinifera]       622   e-176
dbj|BAJ53171.1| JHL18I08.5 [Jatropha curcas]                          612   e-173
ref|XP_004147844.1| PREDICTED: GTPase obg-like [Cucumis sativus]...   611   e-172
ref|XP_002510461.1| GTP-dependent nucleic acid-binding protein e...   603   e-170

>emb|CBI19776.3| unnamed protein product [Vitis vinifera]
          Length = 509

 Score =  642 bits (1657), Expect = 0.0
 Identities = 337/466 (72%), Positives = 380/466 (81%), Gaps = 11/466 (2%)
 Frame = -3

Query: 1641 GYQLLKCRVAK--------VKEEPTSDPYTLIKEPHKYFDQVFITVRSGDGGHGAILSMP 1486
            G   LKCR+ +         KE P+  P +LI+EPHKYFDQV ITVRSGDGGHGAILSMP
Sbjct: 44   GQYTLKCRLTREKESPSLRTKESPSPGPSSLIREPHKYFDQVLITVRSGDGGHGAILSMP 103

Query: 1485 TPKVSSKSSHGKNDQEKKRK-GLYKRNSDGSLILPMGGHGADVVIYADEGKDTLLEFHKK 1309
              +  SK   GK+D++K RK   YKR+ DGSLILPMGGHG  V+IYADEG+D+LLEFHKK
Sbjct: 104  NQRAPSKPQ-GKHDKDKMRKKSSYKRDFDGSLILPMGGHGGGVIIYADEGEDSLLEFHKK 162

Query: 1308 KRYNAKRGGNVDAMGVLTSQLHDGFAGPTLRIPVPAGTVVKRKKGTTLADLANPGDEVLV 1129
             R+NAKRGGNVDAMGVLTSQLHDG A PTLRIPVP GTVVKRK+G  LADLA PGDE+LV
Sbjct: 163  SRHNAKRGGNVDAMGVLTSQLHDGLAAPTLRIPVPVGTVVKRKRGKLLADLAQPGDEILV 222

Query: 1128 ARGGQGGISLLEMPEHRRKKLTDLTSNVIRDENDKVFVLGQPGEEVSLELILRVVADVGL 949
            ARGGQGGISL+EMPEH+RKKL  LT+NV+RD+NDKV VLGQPGEEVSLELILRVVADVGL
Sbjct: 223  ARGGQGGISLIEMPEHKRKKLMALTTNVMRDDNDKVLVLGQPGEEVSLELILRVVADVGL 282

Query: 948  VGLPNAGKSTLLASITLARPDIANYPFTTLMPNLGRLDGDPSLGAGKYSSEATLADLPGL 769
            VGLPNAGKSTLLA+ITLA+PDIA+YPFTTLMPNLGRLDGDPSLGAGKYSSEATLADLPGL
Sbjct: 283  VGLPNAGKSTLLAAITLAKPDIADYPFTTLMPNLGRLDGDPSLGAGKYSSEATLADLPGL 342

Query: 768  IEGAHLGKGLGRNFXXXXXXXXXXXXXVDAASEDPVKDYITVKEELRMYNPEYLERPYIV 589
            IEGAHLGKGLGRNF             VDAA+EDPVKDY TVKEELRMYNP YLERPY+V
Sbjct: 343  IEGAHLGKGLGRNFLRHLRRTRLLVHVVDAAAEDPVKDYRTVKEELRMYNPNYLERPYVV 402

Query: 588  VLNKIDLPEARVRLPSLVEEISMIGCKGAPSKPKRTFQEVVQPLPLLSENAST-PLEPLT 412
            VLNKID+P+A  RLPSL +EI  IG +  PS  +   ++ +Q LP  SE A+   L+   
Sbjct: 403  VLNKIDIPKAMDRLPSLTQEIMKIGSEQIPSSSQNGTEDAIQSLPSDSEGANVLSLDFPD 462

Query: 411  RD-KEKGIEDYPRPLSVVGVSVLKGDRIDEMLKEIRAALRKCQGSD 277
            +D K+K IEDYP PL+VVGVSVLKG R++EMLKEIRAALRKCQ ++
Sbjct: 463  KDRKDKEIEDYPWPLAVVGVSVLKGIRVNEMLKEIRAALRKCQDAN 508


>ref|XP_002280904.2| PREDICTED: GTPase obg-like [Vitis vinifera]
          Length = 614

 Score =  622 bits (1605), Expect = e-176
 Identities = 330/464 (71%), Positives = 366/464 (78%), Gaps = 9/464 (1%)
 Frame = -3

Query: 1641 GYQLLKCRVAK--------VKEEPTSDPYTLIKEPHKYFDQVFITVRSGDGGHGAILSMP 1486
            G   LKCR+ +         KE P+  P +LI+EPHKYFDQV ITVRSGDGGHGAILSMP
Sbjct: 173  GQYTLKCRLTREKESPSLRTKESPSPGPSSLIREPHKYFDQVLITVRSGDGGHGAILSMP 232

Query: 1485 TPKVSSKSSHGKNDQEKKRK-GLYKRNSDGSLILPMGGHGADVVIYADEGKDTLLEFHKK 1309
              +  SK   GK+D++K RK   YKR+ DGSLILPMGGHG  V+IYADEG+D+LLEFHKK
Sbjct: 233  NQRAPSKPQ-GKHDKDKMRKKSSYKRDFDGSLILPMGGHGGGVIIYADEGEDSLLEFHKK 291

Query: 1308 KRYNAKRGGNVDAMGVLTSQLHDGFAGPTLRIPVPAGTVVKRKKGTTLADLANPGDEVLV 1129
             R+NAKRGGNVDAMGVLTSQLHDG A PTLRIPVP GTVVKRK+G  LADLA PGDE+LV
Sbjct: 292  SRHNAKRGGNVDAMGVLTSQLHDGLAAPTLRIPVPVGTVVKRKRGKLLADLAQPGDEILV 351

Query: 1128 ARGGQGGISLLEMPEHRRKKLTDLTSNVIRDENDKVFVLGQPGEEVSLELILRVVADVGL 949
            ARGGQGGISL+EMPEH+RKKL  LT+NV+RD+NDKV VLGQPGEEVSLELILRVVADVGL
Sbjct: 352  ARGGQGGISLIEMPEHKRKKLMALTTNVMRDDNDKVLVLGQPGEEVSLELILRVVADVGL 411

Query: 948  VGLPNAGKSTLLASITLARPDIANYPFTTLMPNLGRLDGDPSLGAGKYSSEATLADLPGL 769
            VGLPNAGKSTLLA+ITLA+PDIA+YPFTTLMPNLGRLDGDPSLGAGKYSSEATLADLPGL
Sbjct: 412  VGLPNAGKSTLLAAITLAKPDIADYPFTTLMPNLGRLDGDPSLGAGKYSSEATLADLPGL 471

Query: 768  IEGAHLGKGLGRNFXXXXXXXXXXXXXVDAASEDPVKDYITVKEELRMYNPEYLERPYIV 589
            IEGAHLGKGLGRNF             VDAA+EDPVKDY TVKEELRMYNP YLERPY+V
Sbjct: 472  IEGAHLGKGLGRNFLRHLRRTRLLVHVVDAAAEDPVKDYRTVKEELRMYNPNYLERPYVV 531

Query: 588  VLNKIDLPEARVRLPSLVEEISMIGCKGAPSKPKRTFQEVVQPLPLLSENASTPLEPLTR 409
            VLNKID+P+A  RLPSL +EI  IG                      S N  +   P   
Sbjct: 532  VLNKIDIPKAMDRLPSLTQEIMKIG----------------------SANVLSLDFPDKD 569

Query: 408  DKEKGIEDYPRPLSVVGVSVLKGDRIDEMLKEIRAALRKCQGSD 277
             K+K IEDYP PL+VVGVSVLKG R++EMLKEIRAALRKCQ ++
Sbjct: 570  RKDKEIEDYPWPLAVVGVSVLKGIRVNEMLKEIRAALRKCQDAN 613



 Score =  189 bits (479), Expect = 3e-45
 Identities = 103/182 (56%), Positives = 125/182 (68%), Gaps = 1/182 (0%)
 Frame = -3

Query: 1644 IGYQLLKCRVAKVKEEPTSDPYTLIKEPHKYFDQVFITVRSGDGGHGAILSMPTPKVSSK 1465
            +G    KCR+ + KE P+  P +LI+EP KYFDQV ITV SG+GGHGAILSM   +  S+
Sbjct: 2    VGSTHFKCRLTRAKESPSPGPSSLIREPQKYFDQVIITVCSGNGGHGAILSMLNQRAPSR 61

Query: 1464 SSHGKNDQEKKRK-GLYKRNSDGSLILPMGGHGADVVIYADEGKDTLLEFHKKKRYNAKR 1288
               G++D+ K RK  L KR+                  + DEG+D+LLEFHK  RYNAKR
Sbjct: 62   PQ-GRHDKGKMRKKSLLKRD------------------FEDEGEDSLLEFHKS-RYNAKR 101

Query: 1287 GGNVDAMGVLTSQLHDGFAGPTLRIPVPAGTVVKRKKGTTLADLANPGDEVLVARGGQGG 1108
            GGNVDAMGVLTS+LHDG A PTLR PVP GTVVKRK+G   ADLA PG+E+L+ARG QGG
Sbjct: 102  GGNVDAMGVLTSELHDGLAAPTLRNPVPVGTVVKRKRGKLPADLAEPGNEILMARGRQGG 161

Query: 1107 IS 1102
             +
Sbjct: 162  FN 163


>dbj|BAJ53171.1| JHL18I08.5 [Jatropha curcas]
          Length = 504

 Score =  612 bits (1579), Expect = e-173
 Identities = 323/460 (70%), Positives = 366/460 (79%), Gaps = 7/460 (1%)
 Frame = -3

Query: 1629 LKCRVAKVKEEPTSDPYTLIKEPHKYFDQVFITVRSGDGGHGAILSMPTPKVSSKSSHGK 1450
            +KCRV + KE P+++  +L++EPHKYFDQV ITVRSGDGGHGAILSMP  +  S  S G 
Sbjct: 47   IKCRVTRPKEAPSANLASLVREPHKYFDQVIITVRSGDGGHGAILSMPNQR--SPKSKGS 104

Query: 1449 NDQEKKR-KGLYKRNSDGSLILPMGGHGADVVIYADEGKDTLLEFHKKKRYNAKRGGNVD 1273
             D++K   K  YKR+ DGSLILPMGGHG D+V+YADEGKD+LLEFH K  +NAKRGGNVD
Sbjct: 105  WDKDKTSYKSSYKRDFDGSLILPMGGHGGDIVVYADEGKDSLLEFHTKSSFNAKRGGNVD 164

Query: 1272 AMGVLTSQLHDGFAGPTLRIPVPAGTVVKRKKGTTLADLANPGDEVLVARGGQGGISLLE 1093
             MGVLTSQLHDGFA PTLRI VP GTVVK K+G  LADLA PGDE+LVARGGQGGISLL+
Sbjct: 165  GMGVLTSQLHDGFAAPTLRIAVPLGTVVKHKRGKLLADLAQPGDEILVARGGQGGISLLK 224

Query: 1092 MPEHRRKKLTDLTSNVIRDENDKVFVLGQPGEEVSLELILRVVADVGLVGLPNAGKSTLL 913
            +PEHRRK+L  LT+NV+RD+ DKV +LGQPGEEVSLELILRVVADVGLVGLPNAGKSTLL
Sbjct: 225  VPEHRRKRLMTLTTNVLRDDGDKVLILGQPGEEVSLELILRVVADVGLVGLPNAGKSTLL 284

Query: 912  ASITLARPDIANYPFTTLMPNLGRLDGDPSLGAGKYSSEATLADLPGLIEGAHLGKGLGR 733
            A+IT A+PDIA+YPFTTLMPNLGRLDGDP+LGAG YSSEATLADLPGL+EGAHLGKGLGR
Sbjct: 285  AAITRAKPDIADYPFTTLMPNLGRLDGDPTLGAGMYSSEATLADLPGLVEGAHLGKGLGR 344

Query: 732  NFXXXXXXXXXXXXXVDAASEDPVKDYITVKEELRMYNPEYLERPYIVVLNKIDLPEARV 553
            NF             VDAA+EDPV DYITVKEELRMYNPEYLERPYIVVLNKIDLPEAR 
Sbjct: 345  NFLRHLRRTRVLVHVVDAAAEDPVNDYITVKEELRMYNPEYLERPYIVVLNKIDLPEARD 404

Query: 552  RLPSLVEEISMIGCKGAPSKPKRTFQEVVQPLPLLSENASTPLEPLTR------DKEKGI 391
            RL SL EEIS IG    PS+     QEVV      +         L+       + +K I
Sbjct: 405  RLSSLAEEISRIGRDEVPSE-----QEVVVNDAFHTSTRYDVANKLSSQISNGDNNDKMI 459

Query: 390  EDYPRPLSVVGVSVLKGDRIDEMLKEIRAALRKCQGSDKA 271
            EDYP PL+VVGVSVLKG R++EMLKEIRAAL+KC+  ++A
Sbjct: 460  EDYPAPLAVVGVSVLKGIRVNEMLKEIRAALKKCRDYNEA 499


>ref|XP_004147844.1| PREDICTED: GTPase obg-like [Cucumis sativus]
            gi|449521477|ref|XP_004167756.1| PREDICTED: GTPase
            obg-like [Cucumis sativus]
          Length = 503

 Score =  611 bits (1576), Expect = e-172
 Identities = 322/460 (70%), Positives = 370/460 (80%), Gaps = 3/460 (0%)
 Frame = -3

Query: 1647 NIGYQLLKCRVAKVKEEPTSDPYTLIKEPHKYFDQVFITVRSGDGGHGAILSMPTPKVS- 1471
            N  Y  +KC++A+V +  +++P TL KE HKYFDQ  ITVRSGDGGHG +LSMP  + S 
Sbjct: 38   NSSYCTIKCKLARVVDS-SANPATLTKEAHKYFDQAIITVRSGDGGHGTVLSMPNQQTSK 96

Query: 1470 SKSSHGKNDQEKKRKGLYKRNSDGSLILPMGGHGADVVIYADEGKDTLLEFHKKKRYNAK 1291
            S+  +GK  ++ K+K LYKR+ DGSLILPMGG G DVVIYADEGKD+LLEFH K RYNAK
Sbjct: 97   SQGRNGKEKEKAKKKSLYKRDFDGSLILPMGGRGGDVVIYADEGKDSLLEFHTKSRYNAK 156

Query: 1290 RGGNVDAMGVLTSQLHDGFAGPTLRIPVPAGTVVKRKKGTTLADLANPGDEVLVARGGQG 1111
            RGGNVDAMGVLTSQLH+GFA PTLRIPVP GTVVKRK+G  LADL +PGDE+LVARGGQG
Sbjct: 157  RGGNVDAMGVLTSQLHNGFAAPTLRIPVPIGTVVKRKRGKLLADLVHPGDEILVARGGQG 216

Query: 1110 GISLLEMPEHRRKKLTDLTSNVIRDENDKVFVLGQPGEEVSLELILRVVADVGLVGLPNA 931
            GISL++ PE+R+KK+  LTSNV+RDE+DKV V GQPGEEVSLELILRVVADVGLVGLPNA
Sbjct: 217  GISLIDTPENRKKKMMSLTSNVMRDESDKVLVFGQPGEEVSLELILRVVADVGLVGLPNA 276

Query: 930  GKSTLLASITLARPDIANYPFTTLMPNLGRLDGDPSLGAGKYSSEATLADLPGLIEGAHL 751
            GKSTLLA+ITLA+PDIA+YPFTTL+PNLGRLDGDPSLGAG Y SEATLADLPGLIEGAHL
Sbjct: 277  GKSTLLAAITLAKPDIADYPFTTLIPNLGRLDGDPSLGAGMYQSEATLADLPGLIEGAHL 336

Query: 750  GKGLGRNFXXXXXXXXXXXXXVDAASEDPVKDYITVKEELRMYNPEYLERPYIVVLNKID 571
            GKGLGRNF             VDAA+++PV DY TV+EELRMYNP YL RPY+VVLNKID
Sbjct: 337  GKGLGRNFLRHLRRTRLLVHVVDAAAQNPVDDYRTVREELRMYNPNYLGRPYVVVLNKID 396

Query: 570  LPEARVRLPSLVEEISMIGCKGAPSKPKRTFQEVVQPLPLLSENASTP-LE-PLTRDKEK 397
            LPEA+ RLPS+ EEI  IG      +   + +  VQ   L  + A+ P LE P+  +K+K
Sbjct: 397  LPEAKNRLPSVTEEILRIGTDDRYPEQMGS-ENSVQSSVLEDDLATVPSLEIPVADEKDK 455

Query: 396  GIEDYPRPLSVVGVSVLKGDRIDEMLKEIRAALRKCQGSD 277
             IEDYPRPLSVVGVSVLKG  I  MLKEIRAALRKC+ SD
Sbjct: 456  EIEDYPRPLSVVGVSVLKGINISLMLKEIRAALRKCRDSD 495


>ref|XP_002510461.1| GTP-dependent nucleic acid-binding protein engD, putative [Ricinus
            communis] gi|223551162|gb|EEF52648.1| GTP-dependent
            nucleic acid-binding protein engD, putative [Ricinus
            communis]
          Length = 474

 Score =  603 bits (1554), Expect = e-170
 Identities = 330/505 (65%), Positives = 376/505 (74%), Gaps = 1/505 (0%)
 Frame = -3

Query: 1782 MAYLVTQFSSSLNLKQLRKEEPFNSFLTARLPLLQRVDWPNNRSQNIGYQLLKCRVAKVK 1603
            MAY+ T  SSS    Q   ++     L A L L +R    NN+S  +    + CR++K+K
Sbjct: 1    MAYVATIPSSSFLSLQFCSDK----LLFAHL-LPERCCQRNNKSDTLRTYKVSCRISKLK 55

Query: 1602 EEPTSDPYTLIKEPHKYFDQVFITVRSGDGGHGAILSMPTPKVSSKSSHGKNDQEKKRKG 1423
            E P   P + I+EPHKYFDQV ITVRSGDGGHGAIL+MP P+   KSS  K+ +++ +K 
Sbjct: 56   EAP---PASFIREPHKYFDQVIITVRSGDGGHGAILNMPQPQ--QKSSDVKSKKKQNKKS 110

Query: 1422 LYKRNSDGSLILPMGGHGADVVIYADEGKDTLLEFHKKKRYNAKRGGNVDAMGVLTSQLH 1243
             YKR+ DGSLILPMGGHG DVVIYADEGKD LLEFH K R+NAKRGGNVDAMGVL S LH
Sbjct: 111  SYKRDFDGSLILPMGGHGGDVVIYADEGKDFLLEFHSKSRFNAKRGGNVDAMGVLNSLLH 170

Query: 1242 DGFAGPTLRIPVPAGTVVKRKKGTTLADLANPGDEVLVARGGQGGISLLEMPEHRRKKLT 1063
            DGFA PTLRIPVP GTVVK K+G  LADL  PGDE+LVARGGQGGISLL+ PEHRRK+L 
Sbjct: 171  DGFAAPTLRIPVPVGTVVKHKRGKLLADLTQPGDEILVARGGQGGISLLDAPEHRRKRLM 230

Query: 1062 DLTSNVIRDENDKVFVLGQPGEEVSLELILRVVADVGLVGLPNAGKSTLLASITLARPDI 883
             LT+NV+RD++DKV VLGQPGEEV+LELILRVVADVGLVGLPNAGKSTLLA+IT ARPDI
Sbjct: 231  ALTTNVLRDDSDKVLVLGQPGEEVNLELILRVVADVGLVGLPNAGKSTLLAAITHARPDI 290

Query: 882  ANYPFTTLMPNLGRLDGDPSLGAGKYSSEATLADLPGLIEGAHLGKGLGRNFXXXXXXXX 703
            A+YPFTTLMPNLGRLDGDP+LGA  YSSEATLADLPGLIEGAHLGKGLGRNF        
Sbjct: 291  ADYPFTTLMPNLGRLDGDPTLGAAMYSSEATLADLPGLIEGAHLGKGLGRNFLRHLRRTR 350

Query: 702  XXXXXVDAASEDPVKDYITVKEELRMYNPEYLERPYIVVLNKIDLPEARVRLPSLVEEIS 523
                 VDAA+EDPV DY TVKEELRMYNPEYLERP++VVLNKIDLP A+ RL SL EEIS
Sbjct: 351  LLVHVVDAAAEDPVNDYRTVKEELRMYNPEYLERPHVVVLNKIDLPGAKDRLSSLTEEIS 410

Query: 522  MIGCKGAPSKPKRTFQEVVQPLPLLSENASTPLEPLTRDK-EKGIEDYPRPLSVVGVSVL 346
             IG                              E    D+ +K IEDYP PL+VVGVSVL
Sbjct: 411  EIGSS----------------------------EIFNGDRNDKEIEDYPAPLAVVGVSVL 442

Query: 345  KGDRIDEMLKEIRAALRKCQGSDKA 271
            KG R++EMLKEIR AL+ C+ S++A
Sbjct: 443  KGIRVNEMLKEIRTALKNCRDSNEA 467